ap1m3 (LOC104919037,LOC103355575,LOC103463064,LOC107392936,LOC106528254)


Basic Information

Item Value
gene id ap1m3
gene name LOC104919037,LOC103355575,LOC103463064,LOC107392936,LOC106528254
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 11981529 ~ 12014434 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039811811.1
AGCAGCCAGTTGCAGTGAAACGCAACGACTGAagagtggaggagaggagaatgaTGGGAGCGAATACTATCCCCCTTAACTGACCCAAATCTTACAGTGGACCCAGATATTATCTAGGCTAATTATTGTTCTTGTTCTGAATTGTCTCCACGAAGATGTCGGCGTCGGCGATATTTATCCTCGACCTGAAGGGAAAGGTGCTAATCTGCCGTAACTACATGGGGAACATGGACATGAATGAGATTGACCACTTTATGCCCATCCTgatgaagagagaagaggacGCTGAGATGACCCCTCTGGTCACCCACGGCTCCACACACTTCCTGTGGATCAAACACAGCAACCTTTACTtggTGGCACTGACGAAGAAGAATGCCAACGCTGCCCTGGTGTACTCCTTTCTTTATAAAATTATCCAGGTATTTAAGGAGTACTTTAAGGAGCTTGAGGAGGAGAGTATTCGTGACAACTTTGTGACAGTGTACGAGCTGATGGACGAAGTGATGGACTTTGGTTTTCCGCAGACAACTGATAGCAAGATCCTACAAGAGTACATCACCCAGCAGGGTCATAAATTAGAGGTTGGGGCTCCTCGACCTCCTGCCACTGTCACCAATGCGGTGTCTTGGCGGTCAGAGGGCATCAAGTACAGGAAGAACGAAGTTTTCATGGACGTCATTGAGTCAGTAAATCTCCTGGTGAACGCCAACGGCAGCGTCCTGCGGAGTGAAATAGTGGGCACTATCAAACTCAAAGTGGTCCTGTCGGGGATGCCTGAACTCAGACTGGGCCTCAATGACAAAGTGTTGTTTGAAATCACAGGCAgaGAGAAGAGTAAGACAGTGGAGCTAGAGGATGTGAAGTTTCATCAGTGTGTCCGTCTGTCACGCTTCGAGAACGACCGCACCATTTCTTTCATCCCCCCCGACGGCGAGAGCGAGCTCATGTCCTACCGCCTCAACACTACAGTGAAGCCTCTCATATGGATTGAGAGCGTGATTGAGAAGTACTCTCACAGCCGCGTGGAGATCAAGGTGAAGGCTCGGAGTCAGTTTAAGAGCCGCTCCACTGCCAACAATGTGTCCATTCTGGTGCCAGTGCCGAGTGATGCTGACTCACCCAAGTTCAAGACCAGCACAGGCAGCGCCAAGTGGGTGCCCGAGAAGAGCGTGGTGCAGTGGAACATCAAGTCTTTCCCTGGTGGTAAGGAGTACATGATGCGGGCGCATTTTGGGCTACCCAGTGTGGATAGCGATGAGCTGGAAGCAAAGAGAccaatcacagttaactttGAGATCCCTTATTTCACTGTGTCTGGGATTCAGGTGCGTTACCTTAAGATCATAGAGAAGAGCGGTTACCAGGCGTTACCATGGGTGCGCTACATCACACAAAGTGGAGATTACCAGCTCCGGACACAGTAAAGGGCACAGACGCTGCTAGACGAATGGCtattttctccctctgtctgtcttcctctcttctctcttctcctctctctgtttctctggcTGGGCCCCGTCTGCAATGGACAGCAGAGGACAAGCGAATGAGGACACATGAAATGAGTTTCTCACCCTGAACGGAAAGGAGATGTCATCCTTTCCTATAAGACTTTCTCAACTCAAGACGGGAAAGGCTGTTgcatgacctctgacctgtgattttgttttttaaagggcTCCTCAGGACTCCagcaaaatgttttaatgtggGAATAATGAACTGATAACTTTGTGACACTGTCTGTTTCTGGCAAGCTCTCATCTCCTCACTTTTAATGTGAAACCCCTTCATGCTAATTTAGAGCACAATTTTAGggaaaatacattatttttaacCACATATCCTCAGAAAAGAGAAcatttagaaacattttaaaatatagaaTTTGGAGCATTATCTTTGCTTTTCCACTGAAACATGTAGCTTTTACTGTCTAACAtgcaaaccaaaaaaaaaatagtgccaATACACAGTAAGTGTGATCGGTAATTGAGAGAATTTTTATTTCTCAAAGGGCTGGAATATTGCAGATGGGTGATTTTTCTCAATGATAAGTGTGCCATATACTCCATCAGATTTGATTCTTTTCTGTAGAGAAAGTTGTTGCTCCACGCAGGATGTTAACCACTAGACCACATCTTGGTACACCTGTTAGCATTTTTAACTGTAAGGGTTTTTattcctcattttttttgtccttaATAACCACTTTATTatccatatacagtacattttaacTTTGTTGATAATCTCCATCCCTCTCAAAGGCATATGTTTTCCGGAACTTTTATATCATATATTCATTGCCTTAAAAGAATTGCCTATGTATCATCGCCTTGAGCACTGTGAAAATAATCCCCAGTGCAATGAAACTAACACCAGCGACCAGATCAATGATTAATAAGGCACAATATGGTCTGAGGCGTTGGCAGTGTAACATAATACCATTAACGCGCTCTCATGGGGCCTGTAACCTTGTCCTCGTGCTTGAAATCAGCTTGCACCTTTGAGGCAGAGACTGAAGGAATGAGCATGTTGCAGATGTTTTGTCATATTTATATCTGTtcttactgtatactgtactaGTTAGTCCCCTGTGGAAAATGTTTAGACAAaatggaggggaggggaggggaggggggcaggaCAAAGGTAAAATAACCTGCAGGTATTTCTTTGCAGAATCTGAGAACATCGATAATATGTTGAGGTAATTGTTTTTCCATGACTCTTtatctgttatatatatatatatattatatatatttatatatatatttatatatatatccaccTCTGCAGGCCCATATACTTCTTCAAAGCAGTTTGTGGTGTGTTTTACTCCCTCTGTTGTGCATGCATTGCACCACATCAGTTCAGCTGCACTGCCAACAGCAAAGAAGAGAGTCCTGTGTTGATTTATTGCATCTCTGCTGTTAAGTACAATTACAACATATTACAATCATTCCATTATCTTGGGTGGGGAACAGTTTTCTGACACCAATGAGGATTGTTAataagtgtttttgtgtgttatcatgtatttgcatttatttatcCACTACTATTTGTCCATGGGAAGCAAAGGGATGTATTTGgaaataaacattttttgtaTCTTG

Function

NR:

description
AP-1 complex subunit mu-2-like

GO:

id name namespace
GO:0006886 intracellular protein transport biological_process
GO:0016192 vesicle-mediated transport biological_process
GO:0030131 clathrin adaptor complex cellular_component

KEGG:

id description
K12393 AP1M; AP-1 complex subunit mu

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039811811.1 True 3131 mRNA 0.43 12 11981529 12014434

Neighbor

gene id symbol gene type direction distance location
c9h1orf210 LOC104958367 coding upstream 1243 11970363 ~ 11980286 (+)
ddah1 ddah1 coding upstream 64956 11834555 ~ 11916573 (+)
LOC120565976 col24a1 coding upstream 194596 11684362 ~ 11786933 (+)
dnai3 wdr63 coding upstream 404895 11556357 ~ 11576634 (+)
LOC120566036 LOC104946463 coding upstream 432431 11525470 ~ 11549098 (+)
ebna1bp2 NA coding downstream 41704 12056138 ~ 12061625 (+)
usp1 NA coding downstream 435618 12450052 ~ 12459145 (+)
angptl3 angptl3 coding downstream 480320 12494754 ~ 12499047 (+)
atg4c atg4c coding downstream 498172 12512606 ~ 12522434 (+)
foxd3 foxd3,LOC102785247 coding downstream 647485 12661919 ~ 12663893 (+)
G94813 NA non-coding upstream 61492 11916631 ~ 11920037 (+)
G94779 clg17h1orf52,LOC104926352,LOC103370521,LOC101473273,LOC102790030,LOC102310746 non-coding upstream 322457 11651522 ~ 11659072 (+)
G94747 NA non-coding upstream 404268 11576788 ~ 11577261 (+)
G94706 NA non-coding upstream 741292 11238444 ~ 11240237 (+)
G94691 NA non-coding upstream 786599 11194647 ~ 11194930 (+)
G94997 NA non-coding downstream 851478 12865912 ~ 12866251 (+)
G95002 NA non-coding downstream 980801 12995235 ~ 12995654 (+)
G95027 jak1,LOC102785183 non-coding downstream 1093255 13107689 ~ 13112320 (+)
G95040 NA non-coding downstream 1131871 13146305 ~ 13146795 (+)
LOC120564967 NA non-coding downstream 1358010 13372444 ~ 13375668 (+)
znhit6 znhit6,LOC102790327 other upstream 159647 11789135 ~ 11821882 (+)
LOC120565923 LOC103370579,LOC100695501,LOC102794561,LOC101470646,LOC102226407,LOC102291616 other upstream 523383 11359690 ~ 11458146 (+)
si:ch211-162e15.3 LOC103376230,LOC100712485,LOC108238459,LOC102795316,LOC102207055 other upstream 1033213 10946932 ~ 10948316 (+)
G94598 NA other upstream 1040285 10916925 ~ 10941244 (+)
atp11b atp11b other upstream 1566703 10363462 ~ 10414826 (+)
lrp8 LOC103355569 other downstream 147204 12161638 ~ 12443080 (+)
ror1 ror1 other downstream 728371 12742805 ~ 12865842 (+)
raver2 raver2 other downstream 991134 13005568 ~ 13100445 (+)
G95046 NA other downstream 1158591 13173025 ~ 13220372 (+)
LOC120565776 NA other downstream 1321300 13335734 ~ 13342098 (+)

Expression


Co-expression Network