LOC120565797 (slc22a23,LOC102794535)


Basic Information

Item Value
gene id LOC120565797
gene name slc22a23,LOC102794535
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 7353848 ~ 7379344 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039811822.1
ATGGCAGCCGGCCGGCCGGAGGCGCAGGACCACCCGCCCGAGAACGGCTTCACCCCGCTGGAGCACCCAGTGCCCCGGCTGCTTCCGCGCATCGACGGCTCGGTTCTGCCGTCTCTGGGGGGCTTTGGGAAACATCAGAAGCAGCTCGTGGTCCTGACCTGGATACCGGCATTGTTCATCGGCTTTAGCCAGTTTTCGGATTATTTCCTCCTGGCTCAGCCTAATGGCACGTGCGTGCAACCCCTCACCAACGAGAGTAACTGGACCACGGCACCCCCGCCGGTCACCGTCCCCGGTGGCGCACCCGCGCTGCAACCCAAGGGCAACGGCACCATCAGGGAGGGATACGGCGACGACAGCGGCGGTATGCTGTGCGCCTGCAAGGAGTGGAGGCTGGAGCTGCAGACGGGACTTAGCCAGAATGTTGTTACCAAGTGGAACCTGGTGTGTGACTCAGCCTGGAAGGTGCACATTGCCAAGTTCTCTTTGCTGGTGGGCTCCATATTTGGCTACCTAGTGATGGGTGTCATGGCTGACTGGTTTGGTCGACACCCGGTGTTGATTCTCTCGGTGCTTTTCATGCTGGTGTTTGGTCTGAGCGTTGCCTTCTCTGTAAACGTCACCATGTTCAGCACCTTGCGCTTCTTTGAGGGTTTCTGCTTGGCGGGCCTCGCTCTCTCCCTCTACGTGCTCAGGATTGAGCTTTGTTTGCCAGCCTGGCGCTTCTCCATGACCATGGTGGCCAGTTTTCTGATGGTGGGCGGGCAGCTACTGATGCCAGGGGTGGCCGCTCTGTGCCGCAATTGGCCGGGCCGGGATGACTGGCAGGTCCTGCAGATTGTCATTATCAGCCCTTTCGTTTTGATGCTGCCCTACGTCTGGCTTTTTCCCGAGTCGTTGCGCTGGTTGCTGGCCACCCAGCACTACAGGCGGTCCAAAGCCATGATGCTGCGCATCGCCAGGAAGAACCAGGTTAACACGACAACCGAGCCGAGTGGAGTGTTCACAGAGCTGGAGCAGGAGCTGCACAAGAAACCCCAGAGGACCTGCATTGTCAAGATGATGAGCACCAGGAACCTGTGGAAAAACATTGTGGTGCTGTGTGTCAACTCgctGACAGGTTACGGGATCCACCACTGCTTCGCCCGCAGTATGATGGACCCGGAGGCCCAGCCCACAGCTTTGTGCCACGCGGACTATTACACTATGGCTGGCATCGCCGTGGCAACCTGCCTGGCGCTTTGCCCCGCGGTGGGGTTGATGGGTCGCCGTGGAGGGCTGCTCACCTTCATGATCATAACAGCCCTGGCATCGCTACTACAGCTGGGGTTACTCAACTTGATTGGGAAGTACAGCCTTCGCCATGACATAGTTCTGCGCGACACTCTGAACAGGAAATTCTCGGTGGCCTTCTCCATCATCGGCATGTTCTCCTCCCATGCAGTCAGCACACTCAGCATATTCTTTTGTGCTGAAATCACTCCTACTGTCATCAGgGGTGGAGGGCTGGGCCTGGTCCTGGCCAGCGCCGGCTTCGGCATGCTCACTGCGCCCATCATGGAGCTCCACAACCAGAAGGGCTACTTCCTGCACCACGTGATCTTCGCCTGCTGCACCCTGCTGTGCATcatctgcctgctgctgctgcccgaGCCGCGGGGCCAGCCGCTGCCGGAGAGCCTGGCCGACGGAGAGACCTTCACCCGTCAGGCGCTGCTCCATCCAGGAGAGCAGCACCTCCTTCTCGCCAAGACTGACGGCGACTACTCCCGCGTCCACGACACGCCGCTACACCTCACGACCACCGGGGGCGCGACAGTGGCGGCGGCAACCGCTCTGGCAGCGGTGCCTGCCTCATACGCCCTGGCCACCGGCGGGGAGGTGATTGGAAATAATGCCATAGCCAATGGGGTGTGAACACCATAGCAATAATCTACTACCGTGCTAATTATTGCTCAAGAATTTTAACCTGAACAGAATGGTCAATGAACCTctgcaacaaaaaataaaaataataataaacttttaaggaagaaaaaaaaaaaaaaagaatctttcgGATGAAC

Function

symbol description
slc22a23 Predicted to enable transmembrane transporter activity. Predicted to act upstream of or within transmembrane transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human SLC22A23 (solute carrier family 22 member 23).

NR:

description
PREDICTED: solute carrier family 22 member 23

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039811822.1 True 2066 mRNA 0.58 10 7353848 7379344

Neighbor

gene id symbol gene type direction distance location
LOC120565613 NA coding upstream 68089 7263547 ~ 7285759 (+)
igfbp3 LOC103358919 coding upstream 226576 7108149 ~ 7127272 (+)
si:ch211-191a24.3 LOC103358916 coding upstream 285914 7007170 ~ 7067934 (+)
si:ch211-191a24.4 LOC104966872 coding upstream 382548 6965547 ~ 6971300 (+)
ghrhrb LOC100710271,LOC101475240,LOC103357300 coding upstream 630571 6672071 ~ 6723277 (+)
LOC120566053 dusp22 coding downstream 18794 7398138 ~ 7413692 (+)
LOC120566212 irf4,LOC104941070 coding downstream 36097 7415441 ~ 7423820 (+)
foxq1b foxq1,LOC104946962 coding downstream 200848 7580192 ~ 7581837 (+)
foxf2b foxf2,LOC102792585 coding downstream 206797 7586141 ~ 7590299 (+)
LOC120564954 foxc1,LOC104932399,LOC104963658 coding downstream 224116 7603460 ~ 7605630 (+)
G93933 NA non-coding upstream 26162 7327171 ~ 7327686 (+)
G93932 LOC103399850 non-coding upstream 30422 7322066 ~ 7323426 (+)
G93931 NA non-coding upstream 32393 7318842 ~ 7321455 (+)
G93912 NA non-coding upstream 66695 7271936 ~ 7287153 (+)
G93906 NA non-coding upstream 118129 7233146 ~ 7235719 (+)
LOC120566054 NA non-coding downstream 15029 7394373 ~ 7395278 (+)
G93985 NA non-coding downstream 145646 7524990 ~ 7525343 (+)
G93986 NA non-coding downstream 177910 7557254 ~ 7615427 (+)
LOC120565893 NA non-coding downstream 512880 7892224 ~ 7895718 (+)
G94056 LOC104961454 non-coding downstream 574071 7953415 ~ 7955102 (+)
G93938 NA other upstream 3261 7349810 ~ 7350587 (+)
rhpn1 rhpn1 other upstream 972250 6354892 ~ 6381598 (+)
G93638 NA other upstream 1139831 6202085 ~ 6214017 (+)
G93613 NA other upstream 1302328 6035369 ~ 6051520 (+)
trmt1l trmt1l other upstream 2640615 4685224 ~ 4713233 (+)
LOC120565294 pycrl other downstream 499575 7878919 ~ 7890177 (+)
LOC120565614 NA other downstream 516801 7896145 ~ 7905247 (+)
G94073 rgs5,LOC107393027,LOC104951458,LOC100708109,LOC105932873 other downstream 858026 8237370 ~ 8286436 (+)
G94199 LOC103367571,LOC102312400,LOC100710958,LOC101467655 other downstream 1767818 9147162 ~ 9168877 (+)
LOC120566011 NA other downstream 2005161 9384505 ~ 9543535 (+)

Expression


Co-expression Network