dohh (dohh,LOC102789931)


Basic Information

Item Value
gene id dohh
gene name dohh,LOC102789931
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 36704452 ~ 36712253 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039811841.1
gtcaACCCGGAACCTGGTCCTGCCAGCGGAAGTTGCAACAGGACGCCTACGCGCAGCCGCGGCACcgaacacactgaacacaccgGTGGTCCCGCAGCAGCTGTTTCTAACGTCACCTGTGGACCCAAAGCGTCACATCGCTAATCAGCTCAGCAGTTTGAGACATTTAGCTAAAGAAGGAGTGTTCCAGACTGAAGACACCCCCCCGGCTGTGTGTCTCCCTGTGCGGCAGAATGGCCAGTGTGGACCAGGTGGTGGCGGTGGGACAGGTTCTGGTGGACCCTGGAGTGGACCTGACCCGGCGCTTCAGAGCCTTATTCACCCTGAAGAACCTGGGAGGAGCTGAAGCTGTAGACTGGATCAGTAAAGCCTTCACCGATGACTCGGCCCTGCTGAAGCACGAGCTGGCTTACTGCCTGGGACAGATGCAGGACACCCGGGCCATACCCCCTTTGACTGCAGtcctcagagacacacagcaggAACCCATGGTCCGCCACGAAGCAGgggAGGCTCTGGGAGCGATTGGTGATCCTGTGGTTCTGGACCTCCTGAAAGAGTACAGTCAGGATCCTGTCATAGAGGTGGCTGAGACATGTCAGCTGGCTGTGCGGCGGCTGGAGTGGCTGCAGGCTGGAGGAGACACACAGCTGGACGACGGCAGCACCGATAAGAACCCGTACTGCTCGGTGGACCCGGCCCCTCCAGCCCTGAGGAGGAGTGTGCCTGAGCTGCGCTCCATCCTGTTGGATGAAAGCCTGCCACTGTTTGAGCGCTACCGTGCCATGTTTGCCCTGCGTAACCTGGGCAACGAGGAGGCGGTGCTGGCACTGGGAGACGgCCTGCAGTGCTCCAGCGCTCTGTTCCGTCATGAAATCGGCTACGTCCTGGGGCAGATGCAGCACCCGGCGGCCTTCCCGGCCCTGCGCGCCGCTCTGGAGCGCTCCGGGGAGAACCCCATGGTCCGACACGAGGCGGCAGAGGCCCTCGGCTCCATTGGTAGAGAGGAGTGTCTGGCCGTTCTGCAGCGTTACCGTGGAGACGGCGAACGCGTAGTCAAGGAGAGCTGCGAGGTGGCTCTGGATATGCTGGAGTACGAAAACAGCGAGCAGTTCCAGTATGCGGACGGACTGGTCCGGTTACAGGGCTAAAAGGCTCCGTCAACACGGTCACTACCCCAGCCCGGCAGAGAGAAGAGCTTTGCGGTATGAAAGATACTCAGCACACAAACGTGCGGCAGGCGGTGAGAGCGTAGCATCTACATCCTCAAAGCTAGCATCATCACTGCTCACTTTCTCTGCTCCGATTCAGGCTGGAGGTAGGAGGAGTGACGGATCCATTCACAGGCTTTTCCTCTGAAGGCGTGTTTCTGTCTTGTGTTTGCGTCTGAGCTGAGTGTGATCATACAGTCCTACAGAGTGGACTCAGAGAGAACTAAAGGTTCTGATCCAGGCTGCTCCACAGCTGATCACTTCTTTCTGCTCTCACACATAGATACAAGCCAAAGATCTATCTGGATGTTGGTCCATTCTAAACTTGTAACTGCTACAGAGATCAACAGCGTAAAACATTAGTAAAATCTCATTCCCTCGTGCTCCTCCGATTGCTTGGTTACTAGATTACTGCAGGTTTTTGTATCTTGTATTCAAATTTTTCCTGTTTGTCGAATTAAAATGATGCTGTATACATTCA
>XM_039811842.1
aACCCGGAACCTGGTCCTGCCAGCGGAAGTTGCAACAGGACGCCTACGCGCAGCCGCGGCACcgaacacactgaacacaccgGTGGTCCCGCAGCAGCTGTTTCTAACGTCACCTGTGGACCCAAAGAATGGCCAGTGTGGACCAGGTGGTGGCGGTGGGACAGGTTCTGGTGGACCCTGGAGTGGACCTGACCCGGCGCTTCAGAGCCTTATTCACCCTGAAGAACCTGGGAGGAGCTGAAGCTGTAGACTGGATCAGTAAAGCCTTCACCGATGACTCGGCCCTGCTGAAGCACGAGCTGGCTTACTGCCTGGGACAGATGCAGGACACCCGGGCCATACCCCCTTTGACTGCAGtcctcagagacacacagcaggAACCCATGGTCCGCCACGAAGCAGgggAGGCTCTGGGAGCGATTGGTGATCCTGTGGTTCTGGACCTCCTGAAAGAGTACAGTCAGGATCCTGTCATAGAGGTGGCTGAGACATGTCAGCTGGCTGTGCGGCGGCTGGAGTGGCTGCAGGCTGGAGGAGACACACAGCTGGACGACGGCAGCACCGATAAGAACCCGTACTGCTCGGTGGACCCGGCCCCTCCAGCCCTGAGGAGGAGTGTGCCTGAGCTGCGCTCCATCCTGTTGGATGAAAGCCTGCCACTGTTTGAGCGCTACCGTGCCATGTTTGCCCTGCGTAACCTGGGCAACGAGGAGGCGGTGCTGGCACTGGGAGACGgCCTGCAGTGCTCCAGCGCTCTGTTCCGTCATGAAATCGGCTACGTCCTGGGGCAGATGCAGCACCCGGCGGCCTTCCCGGCCCTGCGCGCCGCTCTGGAGCGCTCCGGGGAGAACCCCATGGTCCGACACGAGGCGGCAGAGGCCCTCGGCTCCATTGGTAGAGAGGAGTGTCTGGCCGTTCTGCAGCGTTACCGTGGAGACGGCGAACGCGTAGTCAAGGAGAGCTGCGAGGTGGCTCTGGATATGCTGGAGTACGAAAACAGCGAGCAGTTCCAGTATGCGGACGGACTGGTCCGGTTACAGGGCTAAAAGGCTCCGTCAACACGGTCACTACCCCAGCCCGGCAGAGAGAAGAGCTTTGCGGTATGAAAGATACTCAGCACACAAACGTGCGGCAGGCGGTGAGAGCGTAGCATCTACATCCTCAAAGCTAGCATCATCACTGCTCACTTTCTCTGCTCCGATTCAGGCTGGAGGTAGGAGGAGTGACGGATCCATTCACAGGCTTTTCCTCTGAAGGCGTGTTTCTGTCTTGTGTTTGCGTCTGAGCTGAGTGTGATCATACAGTCCTACAGAGTGGACTCAGAGAGAACTAAAGGTTCTGATCCAGGCTGCTCCACAGCTGATCACTTCTTTCTGCTCTCACACATAGATACAAGCCAAAGATCTATCTGGATGTTGGTCCATTCTAAACTTGTAACTGCTACAGAGATCAACAGCGTAAAACATTAGTAAAATCTCATTCCCTCGTGCTCCTCCGATTGCTTGGTTACTAGATTACTGCAGGTTTTTGTATCTTGTATTCAAATTTTTCCTGTTTGTCGAATTAAAATGATGCTGTATACATTCA

Function

symbol description
dohh Predicted to enable deoxyhypusine monooxygenase activity and iron ion binding activity. Predicted to be involved in peptidyl-lysine modification to peptidyl-hypusine. Orthologous to human DOHH (deoxyhypusine hydroxylase).

NR:

description
PREDICTED: deoxyhypusine hydroxylase-like isoform X1

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0008612 peptidyl-lysine modification to peptidyl-hypusine biological_process
GO:0046872 metal ion binding molecular_function
GO:0019135 deoxyhypusine monooxygenase activity molecular_function

KEGG:

id description
K06072 DOHH; deoxyhypusine monooxygenase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039811841.1 True 1692 mRNA 0.56 6 36704452 36712253
XM_039811842.1 False 1587 mRNA 0.57 6 36704455 36712253

Neighbor

gene id symbol gene type direction distance location
nfic nfic,LOC102792909 coding upstream 110012 36563454 ~ 36594440 (+)
ctns ctns coding upstream 281977 36409868 ~ 36422475 (+)
b4galt6 b4galt6,LOC104925469 coding upstream 330846 36351943 ~ 36373606 (+)
ttr ttr coding upstream 354722 36343295 ~ 36349730 (+)
LOC120565107 NA coding upstream 377074 36298542 ~ 36327378 (+)
rsph4a LOC104961853 coding downstream 1122 36713375 ~ 36720899 (+)
lonp1 lonp1 coding downstream 12936 36725189 ~ 36741996 (+)
plpp6 plpp6,LOC103354162,LOC102785296 coding downstream 163394 36875647 ~ 36882393 (+)
LOC120566029 LOC104964070,LOC103354160 coding downstream 177165 36889418 ~ 36917143 (+)
LOC120565044 LOC104959247,LOC103354158,LOC101062866 coding downstream 210240 36922493 ~ 36931245 (+)
G100668 NA non-coding upstream 25622 36678498 ~ 36678830 (+)
G100667 LOC102192127,LOC101475420,LOC102307792 non-coding upstream 26524 36674449 ~ 36677928 (+)
LOC120565379 NA non-coding upstream 52562 36642906 ~ 36651890 (+)
G100566 NA non-coding upstream 162278 36469528 ~ 36542174 (+)
G100584 NA non-coding upstream 173577 36529802 ~ 36530875 (+)
G100699 NA non-coding downstream 42327 36754580 ~ 36754825 (+)
G100714 LOC104926011,LOC100703953 non-coding downstream 151727 36863980 ~ 36868994 (+)
G100727 NA non-coding downstream 222914 36935167 ~ 36974049 (+)
G100726 myoc non-coding downstream 256434 36968687 ~ 36978162 (+)
G100738 LOC103354147,LOC103137061,LOC106938442 non-coding downstream 326995 37039248 ~ 37043566 (+)
G100671 NA other upstream 5583 36695437 ~ 36698869 (+)
sass6 sass6,LOC102776185 other upstream 92706 36596041 ~ 36611746 (+)
smim24 NA other upstream 169870 36495484 ~ 36534582 (+)
G100568 lmnb2 other upstream 229257 36473538 ~ 36475195 (+)
dsg2.1 NA other upstream 469853 36215464 ~ 36234599 (+)
prrc2c NA other downstream 220402 36932655 ~ 36958360 (+)
G100843 NA other downstream 751661 37463914 ~ 37490072 (+)
usp46 usp46 other downstream 2154182 38866435 ~ 38880605 (+)
prdm5 prdm5 other downstream 2611331 39323584 ~ 39361733 (+)
LOC120565708 LOC103369944,LOC100698021,LOC101482931,LOC102791229,LOC102291415,LOC102212992 other downstream 2741867 39454120 ~ 39464450 (+)

Expression


Co-expression Network