zgc:103559 (LOC104941656,LOC108241179)


Basic Information

Item Value
gene id zgc:103559
gene name LOC104941656,LOC108241179
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 41527401 ~ 41533655 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039811878.1
GGCCCTCAGATACCACACATGGTTGGACCTGAAATTCAGCATGTCACACAGACAGGAAAAGTCAACAAATGCTTATCCTTTGGGCCATTTAGCAGGGGGTGGTGCCTCAGCACTAGGCCGCTGACCTTTCTGAAGTGTAGAAGCAGAGTTAGAGTTTTTTGTACTCATTCATTCTCAATAAAGACAGACATGGAGCTTGGATCAATTGTTAGTGCTGTGAGGAGTAAGAGGGTACTGCTCGGTGACGAAGTCCGTCCTGCTGTCATCGTTATAAAGGATGGGAAGATCCATCAAATACTCTCAGACAGCGACTTTTCTGGAGATGTTGCTGGTGAGGTGTTGGATGTGGGTGACAGGCTGGTGATGCCAGGCATTGTAGATTGCCACGTTCATGTGAATGAACCAGGCCGCACCTCCTGGGAGGGTTTCTGGACTGCCACCAGGgctgctgcagctggagggGTGACAACCATTGTGGACATGCCGCTAAACAGCATCCCTCCAACGACCACACTAGGAAATTTTCACGAGAAGCTGCAGGAGGCAACAGGGAAGTGTTTTGTGGACACAGCCTTCTGGGGAGGTGTGATTCCTGGCAATCAGTTAGAACTTCGGCCCATGATCCAGGCTGGAGTGGCTGGCTTCAAGTGTTTCCTCATCCATAGTGGGGTAGAGGAGTTCCCTCATGTGAATGACTGGGATCTACACAGAACCATGAAGCAGCTGCAAGGCACAGGAAGTGTCCTGCTGTTTCATGCAGAGAGGGATGTTCAGCAGACAACAGAGGAGAATGGTGACCCTTGTCAGTACTCCACCTTTCTGCAGTCCCGACCAGATGACATGGAGATAGAGGCAATACGCACCGTCACAGAACTCTGCCTCCAGTACCAGGTGCGGTGTCATATAGTTCACTTGTCCTCTGCAAAGCCATTGAAACTAATACAGGAAGCACGGCAGGCTGGAGCACCCCTGACAGTGGAGACTACTCACCACTACCTCAGCCTGTGTGCAGAGAACATACCCGCAGGGGCTACACAATTCAAGTGCTGCCCACCCATCAGAGGATCTGTTAACCAGGAGCAGTTATGGTCCGCACTGAAAGCTGGGCAGATTGACATGGTGGTGTCTGACCATTCCCCTTGCACCCCTGATCTGAAGAAACTGGATAATGGAGACTTCACTGAGGCTTGGGGAGGAATTTCTTCTCTACAATTTGGTTTGCCTCTGTTCTGGAGTTCAGCCAGTAAGAGAGGCTTTAAGCTGTCTGATGTGGTGAGACTCCTCAGCCAGAAAACAGCCCAGCTAAGTAGTCTTGACAACCAGAAGGGCAGCCTTGCCCCCGGCTATGATGCTGACTTGGTCATATGGGACCCAGAGAGAGAATTTGAAATAAAAGAAGCAAGCATTTATCATAAAAACAAGCTAACTCCTTACCTCGGTGTCACACTGCAAGGAGTGGTGTGTGTGACCATTGTCAGGGGCCTGCTGGTGTACAGAGAAGGCTCCTTCTGCCCCGAGCCTCTGGGGAAGCATCTCCTCATCCCAATCCAGCCCAACTGTGGAGCACAATAACAACAAGCTGGAAATGACCTCAACATATCTAGAGTTATTGTATTGTCTGAATCTGTGAAAGTGCCCCATGTCGTTTTCTTCATCTCTCTCACCTAATATATGCTTTACATTAGATTTTATCTGAACATTTTGAAATCACAATTTGCGAATTGCAGAATTCCCTACCTCCTCTATAGatggttaaaggggtgatagaatgattatatagggtatttcacaaagttccttatggtctcctaatggggtatgtaacattggttgggctgaaaat
>XM_039811879.1
GGCCCTCAGATACCACACATGGTTGGACCTGAAATTCAGCATGTCACACAGACAGGAAAAGTCAACAAATGCTTATCCTTTGGGCCATTTAGCAGGGGGTGGTGCCTCAGCACTAGGCCGCTGACCTTTCTGAAGTGTAGAAGCAGAGTTAGAGTTTTTTGTACTCATTCATTCTCAATAAAGACAGACATGGAGCTTGGATCAATTGTTAGTGCTGTGAGGAGTAAGAGGGTACTGCTCGGTGACGAAGTCCGTCCTGCTGTCATCGTTATAAAGGATGGGAAGATCCATCAAATACTCTCAGACAGCGACTTTTCTGGAGATGTTGCTGGTGAGGTGTTGGATGTGGGTGACAGGCTGGTGATGCCAGGCATTGTAGATTGCCACGTTCATGTGAATGAACCAGGCCGCACCTCCTGGGAGGGTTTCTGGACTGCCACCAGGgctgctgcagctggagggGTGACAACCATTGTGGACATGCCGCTAAACAGCATCCCTCCAACGACCACACTAGGAAATTTTCACGAGAAGCTGCAGGAGGCAACAGGGAAGTGTTTTGTGGACACAGCCTTCTGGGGAGGTGTGATTCCTGGCAATCAGTTAGAACTTCGGCCCATGATCCAGGCTGGAGTGGCTGGCTTCAAGTGTTTCCTCATCCATAGTGGGGTAGAGGAGTTCCCTCATGTGAATGACTGGGATCTACACAGAACCATGAAGCAGCTGCAAGGCACAGGAAGTGTCCTGCTGTTTCATGCAGAGAGGGATGTTCAGCAGACAACAGAGGAGAATGACCCTTGTCAGTACTCCACCTTTCTGCAGTCCCGACCAGATGACATGGAGATAGAGGCAATACGCACCGTCACAGAACTCTGCCTCCAGTACCAGGTGCGGTGTCATATAGTTCACTTGTCCTCTGCAAAGCCATTGAAACTAATACAGGAAGCACGGCAGGCTGGAGCACCCCTGACAGTGGAGACTACTCACCACTACCTCAGCCTGTGTGCAGAGAACATACCCGCAGGGGCTACACAATTCAAGTGCTGCCCACCCATCAGAGGATCTGTTAACCAGGAGCAGTTATGGTCCGCACTGAAAGCTGGGCAGATTGACATGGTGGTGTCTGACCATTCCCCTTGCACCCCTGATCTGAAGAAACTGGATAATGGAGACTTCACTGAGGCTTGGGGAGGAATTTCTTCTCTACAATTTGGTTTGCCTCTGTTCTGGAGTTCAGCCAGTAAGAGAGGCTTTAAGCTGTCTGATGTGGTGAGACTCCTCAGCCAGAAAACAGCCCAGCTAAGTAGTCTTGACAACCAGAAGGGCAGCCTTGCCCCCGGCTATGATGCTGACTTGGTCATATGGGACCCAGAGAGAGAATTTGAAATAAAAGAAGCAAGCATTTATCATAAAAACAAGCTAACTCCTTACCTCGGTGTCACACTGCAAGGAGTGGTGTGTGTGACCATTGTCAGGGGCCTGCTGGTGTACAGAGAAGGCTCCTTCTGCCCCGAGCCTCTGGGGAAGCATCTCCTCATCCCAATCCAGCCCAACTGTGGAGCACAATAACAACAAGCTGGAAATGACCTCAACATATCTAGAGTTATTGTATTGTCTGAATCTGTGAAAGTGCCCCATGTCGTTTTCTTCATCTCTCTCACCTAATATATGCTTTACATTAGATTTTATCTGAACATTTTGAAATCACAATTTGCGAATTGCAGAATTCCCTACCTCCTCTATAGatggttaaaggggtgatagaatgattatatagggtatttcacaaagttccttatggtctcctaatggggtatgtaacattggttgggctgaaaat

Function

NR:

description
PREDICTED: allantoinase, mitochondrial-like

GO:

id name namespace
GO:0000256 allantoin catabolic process biological_process
GO:0050897 cobalt ion binding molecular_function
GO:0004038 allantoinase activity molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG:

id description
K01466 allB; allantoinase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039811878.1 True 1843 mRNA 0.49 11 41527401 41533655
XM_039811879.1 False 1840 mRNA 0.49 11 41527401 41533655

Neighbor

gene id symbol gene type direction distance location
im:7152348 NA coding upstream 299745 41226610 ~ 41227656 (+)
trnap-ugg_3 NA coding upstream 301696 41225634 ~ 41225705 (+)
trnap-cgg_3 NA coding upstream 302239 41225091 ~ 41225162 (+)
bcl6aa bcl6 coding upstream 421653 41086373 ~ 41105748 (+)
zbtb11 zbtb11 coding upstream 780024 40737734 ~ 40747377 (+)
G102189 NA non-coding upstream 15031 41511984 ~ 41512370 (+)
G102074 NA non-coding upstream 258745 41209660 ~ 41268656 (+)
G102081 NA non-coding upstream 292999 41231667 ~ 41234402 (+)
G102022 LOC106527457,LOC108240210,LOC103354232,LOC107088662 non-coding upstream 370361 41156552 ~ 41157040 (+)
G102021 NA non-coding upstream 370934 41154922 ~ 41156467 (+)
G102165 NA other upstream 74095 41452674 ~ 41453306 (+)
atp10a atp10a other upstream 967506 40515093 ~ 40559895 (+)
LOC120565298 cdkl5,LOC103356958 other upstream 1787124 39693912 ~ 39740277 (+)
reps2 reps2,LOC102792668 other upstream 1934639 39561061 ~ 39592762 (+)
LOC120565708 LOC103369944,LOC100698021,LOC101482931,LOC102791229,LOC102291415,LOC102212992 other upstream 2062951 39454120 ~ 39464450 (+)

Expression


Co-expression Network