LOC120565835


Basic Information

Item Value
gene id LOC120565835
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 24520634 ~ 24524358 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039811884.1
ATTAGAAAAACAAGGATTTAACTTAAGTAGAAAAGTTATTTCAATCAACTTAGAAAATATAGTTCTTCATATATTACCAATTCTGGGCAACAGGTGTTTGTGGGTCACTCACTGATGCAGTGGACATTAATCCTTTTCCTTGGTAGCTCCTTGGCTGTGACTACCTTGGGCTGGACATATCATTACTCAAAAACGACCATGAACTGGACCCAGGCCCGACGTTGGTGCCAAACCGATTACACAGACATGGTGGTTATCCAAAACCAGACAGAGAACGACTATCTGGTCTCCAAGTTGCCAAACAGAACTAGGAGTCCATATTATTGGATTGGAATCACTAAAAACCACATGAATGAAAATTGGACCTGGATTGGGAATAACAGCACGTGGGTTGGTGAGCAGTCATGGGCAGTAAATGAGCCCAATAACAACCACAGCAATGAGTTTTGTGTGGAGATCTATGTGAACACAGGACGAAACCGAGGGAAGTGGAATGATGAGAAATGTGCCCTACAAAAATACGCTGTTTGTTATAAAGCCCAATGTAATGCAACATCATGTGGCAGAGGAAGATGCCAGGAGATGATAGAAAACATAACCTGCCTCTGTGAACCTGGCTTTAAGGGAGATAGATGCCAAACAGCTATGGAATGCCCCCCTCTGTCTCAGCCTGATAACGGATACCTTAGCTGCTCGGGAGGAAACCTGACATTCAACTCAACCTGTCGATTTAAATGCTACCCAGGCTTCCTGATAATAGGCCCGCCAGATGTTACCTGTACTGTCACCGGGGTCTGGAGCGGCCCAAGACCTATTTGTACAAGCTATAAACAAGCTCTGTTAGCTGTCGTTGGGTGTGGAGCTCTCTCAGCCTTCTGCTGCATCTGCTTTTGCTGGATGAAACACAGAAAAAGAAAGAAACTTGCCCAAGTAAGGCAGCCTGAAGAAGCGACAAGTCCATCCACTGAGGCACAAGGATGAAGGACAACTGGGACCTCATTTATGTCTTATTAAAATATATCTATAATGACCCAAATGCAGTTACTCGTATTAACTTTAGTACATTGTTAAAGCCtctgaacaggtgttttcagttattctggctgattagactctTTTTAGgttgaaaattgaaattgtttCCACCAATAAGGATGACAAAGGTGTCATTAGTCCCGCCCAAACACGTGCAACAACACTAACAGTGGACTCAGAAAGATGTCAATCTATCCTGAAGGATTGGAAGAGTGTCATCCCCCCCAGCCAAAAACACTGGGCTAATGAACTCCTGTCGTACTGCACACCAGAAAAAATTAAATTGGGGAACTAGATGACTTTGAACTGATTTGGACTCCTTTTTTGAACATCCTGACCCAACTTGACATGACCTCAGACTAGATGTAAATCTATGCTTATTActgtttattctttattttatgattatttAATATCTTGCCTTGCGGAGAGagggtttttgttgtttgatttcgttgttttctttttgtttttgtgtcttgttaaatttaaactataaataaaatatataaaaaaaataaaagaaagatgTCAATCACTCAGTCTAACCACACCCACAAGAAAGGTCCAATCAGCCACATTAACAATAAACACCTGTGTAGGTGTTCAGGGCCTttttaatagacctttttcacggcagacatgttgacatgtc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039811884.1 True 1690 mRNA 0.41 8 24520634 24524358

Neighbor

gene id symbol gene type direction distance location
sele NA coding upstream 1094 24515434 ~ 24519540 (+)
scyl3 scyl3 coding upstream 31883 24481703 ~ 24488751 (+)
foxd2 LOC104918470,LOC103372816,LOC100707784 coding upstream 231945 24287104 ~ 24288689 (+)
foxe3 foxe3,LOC104952243,LOC102794361 coding upstream 239570 24278396 ~ 24281064 (+)
ankrd24 ankrd24,LOC106918341,LOC106947862,LOC102780339,LOC103142601 coding upstream 337606 24168358 ~ 24183028 (+)
LOC120566076 NA coding downstream 115 24524473 ~ 24531588 (+)
atf6 NA coding downstream 65968 24590326 ~ 24627700 (+)
LOC120565979 NA coding downstream 122512 24646870 ~ 24652453 (+)
fyco1a LOC103365712 coding downstream 144024 24668382 ~ 24684071 (+)
ghrhrl ghrhr,LOC102797970 coding downstream 167926 24692284 ~ 24709011 (+)
G97896 LOC104918463,LOC104952282 non-coding upstream 7601 24511971 ~ 24513033 (+)
LOC120565067 NA non-coding upstream 155459 24309609 ~ 24365175 (+)
G97807 sac3d1 non-coding upstream 264553 24254470 ~ 24256081 (+)
G97789 NA non-coding upstream 306775 24211860 ~ 24213859 (+)
G97788 odf3l2,LOC104949085 non-coding upstream 311344 24208229 ~ 24209290 (+)
G97938 NA non-coding downstream 114108 24638466 ~ 24642085 (+)
G98014 LOC106904844,LOC106963772,LOC102314236,LOC103463589,LOC106513892,LOC102207185,LOC100706092 non-coding downstream 260438 24784796 ~ 24785342 (+)
G98015 NA non-coding downstream 262973 24787331 ~ 24787540 (+)
G98019 mknk1 non-coding downstream 309079 24833437 ~ 24835517 (+)
G98021 NA non-coding downstream 313255 24837613 ~ 24875666 (+)
cks2 LOC104918474,LOC108230759,LOC102216377,LOC104949087,LOC105011584 other upstream 312493 24204341 ~ 24208141 (+)
cdc34a cdc34,LOC103368917,LOC104923648,LOC103397164,LOC107393183,LOC103156874 other upstream 870121 23631119 ~ 23650513 (+)
G97596 lpl,LOC108280930,LOC105906969 other upstream 1042816 23474782 ~ 23477818 (+)
LOC120565078 LOC104955513,LOC104923635,LOC103365215,LOC100690174 other upstream 1140259 23378731 ~ 23380375 (+)
pole4 NA other upstream 1197150 23321464 ~ 23323484 (+)
LOC120565649 LOC103373964,LOC107081966 other downstream 224659 24749017 ~ 24765225 (+)
G98012 dmbx1,LOC103373966,LOC108230579 other downstream 257560 24781918 ~ 24783881 (+)
elovl1b LOC106963699,LOC101078639 other downstream 327929 24852287 ~ 24873916 (+)
G98194 NA other downstream 1008467 25532825 ~ 25547089 (+)
slc35a3a slc35a3,LOC101471768,LOC102790943,LOC100705874,LOC108230529,LOC103354215,LOC106515047 other downstream 1205867 25730225 ~ 25738789 (+)

Expression


Co-expression Network