LOC120565951


Basic Information

Item Value
gene id LOC120565951
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 18684198 ~ 18685748 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039812101.1
GTGGGTCAGAATCTAACCCGGCCCGCTgcagcaaggactgagcctaTGTACATGGGCGCATGCTCAACCCGGTTGAGCTACCAAGGTGCCCCCAAACACAAACAAGCAAGTTACATTTTCATTGCATAAGCTTTCCCTCTCTTTATTTCTGTGTATAAACAAAACTTAAGGAAACAAGGTTTACACTTTTAAGTTTCATTTTCCCCAGAATCTATAGTCATGATGAGTCATTTTACAAGCTGTTTGTATACTGTGCAGATCAGCTGTTGTCTCATCTCTTCCTCAGCCACCAGCAACACTGACACTGACAGGATGGCACAGCCAGAGTGGACATGTATCTTCCAGATGAAAACAAAAGATCTTAAACAAGGAGACACCTGGCGTCTGGAGTTTGATGAAATTATTGTACCTGACTGCCCAAACCCAGGCTGGGAGCAGTACATCAGGAACACATGTGCAAGGTTCAAATGCACCAAGTGTGGAAGAGGCTGGCCTTCCAACCGGGTGATGGTGGTCTTTCACATGCGCCTGACATCCGGGCATGGCGTTGTCAAGGTGAGGCCCTTCTGTCAGAATTGCAAGCAGTGCAGCGATGCTCCAATGGAGAAGCCCAAAATCACCTCAGAGAACATCGACATCCTCCTGGAGAATCTGGTGGAGAAGATAAGAATCAAATGCTACCATGAAGACCTGGGCAAAGGACACAGGCCTTTTATTAGCCTGGATGTCAAAAGTCCCCATGAGCCTGCTCATTGTGAGGCCTGCATAGCAGGCATCTGTACAAGGAATTGAGCTTGTGTGGCTTTTAAGACAGCCTTGTTAATAACTTAAAAGaataattattatttgttaGCTCATATTAACAAAGCATTATAAGACTTCCTCCTGTTATTCTGTTTCATTGCATTGTgccctttatatatatatacagtgccttgcgaaagtattcggcccccttgaacgtttcgacc

Function

GO: NA

KEGG:

id description
ko04141 Protein processing in endoplasmic reticulum

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039812101.1 True 971 mRNA 0.45 2 18684198 18685748

Neighbor

gene id symbol gene type direction distance location
LOC120565952 NA coding upstream 801 18682070 ~ 18683397 (+)
mfsd8l1 mfsd8 coding upstream 742463 17928603 ~ 17941735 (+)
polr2h polr2h coding upstream 757562 17920839 ~ 17926636 (+)
LOC120566214 NA coding upstream 811787 17872278 ~ 17872411 (+)
LOC120566229 NA coding upstream 812351 17871710 ~ 17871847 (+)
LOC120565634 NA coding downstream 3471 18689219 ~ 18701367 (+)
LOC120565635 LOC103364550,LOC102304031,LOC101475589 coding downstream 16146 18701894 ~ 18712465 (+)
LOC120565156 NA coding downstream 30006 18715754 ~ 18733910 (+)
LOC120566166 pfn2,LOC102788235,LOC101065608 coding downstream 162489 18848237 ~ 18857894 (+)
LOC120565637 ankub1 coding downstream 226139 18911887 ~ 18917474 (+)
G96372 NA non-coding upstream 24317 18659642 ~ 18659881 (+)
G96361 NA non-coding upstream 62856 18619558 ~ 18621342 (+)
G96353 NA non-coding upstream 70938 18613029 ~ 18613260 (+)
G96341 NA non-coding upstream 97233 18586628 ~ 18586965 (+)
G96273 NA non-coding upstream 791800 17891652 ~ 17892398 (+)
G96398 NA non-coding downstream 58768 18744516 ~ 18744857 (+)
G96399 NA non-coding downstream 63372 18749120 ~ 18751861 (+)
G96417 NA non-coding downstream 96446 18782194 ~ 18859921 (+)
G96438 psmd1,LOC107550672,LOC106613492 non-coding downstream 338535 19024283 ~ 19029464 (+)
G96445 psmd1 non-coding downstream 370593 19056341 ~ 19057812 (+)
nmur1a LOC103368681,LOC104952433 other upstream 19085 18646703 ~ 18665113 (+)
nppc nppc,LOC104932751,LOC103372810 other upstream 824787 17855631 ~ 17859411 (+)
kdm4b kdm4b,LOC104945107,LOC108234360,LOC108412081 other upstream 2307749 16320494 ~ 16376449 (+)
kcnn1b LOC104945110,LOC103355562 other upstream 2383198 16289823 ~ 16301000 (+)
LOC120564959 LOC104946909,LOC103360792,LOC102294988,LOC101486556,LOC102197099 other upstream 3051386 15523929 ~ 15632812 (+)
G96418 tsc22d2 other downstream 96852 18782600 ~ 18785636 (+)
G96513 NA other downstream 845019 19530767 ~ 19531677 (+)
prkacba prkacb other downstream 1863251 20548999 ~ 20564824 (+)
LOC120565275 ctxn1,LOC108166259,LOC106954365,LOC103138526,LOC104947303,LOC105353898 other downstream 2725588 21411336 ~ 21441558 (+)
lsm7 lsm7,LOC102793261 other downstream 2869146 21554894 ~ 21557731 (+)

Expression


Co-expression Network