LOC120565952


Basic Information

Item Value
gene id LOC120565952
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 18682070 ~ 18683397 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039812102.1
CTTATGGTCTCGCAACCTAGGCATGATGACTCATTCTCACAAGTTGTTTGTATACTGTGCAGAACAGCTGTCAGTGTTTTGTATCTTCCTGATCCACCAGCACTACTGGAACTGACAGGATGGCAGAGCCAGAGTGGACAAGTATCTTCCAGATTACAGCAAGGGATCTTAAAGACTCCTGGCGTCTGGAATTTGATGAAAGTATTGTGCCTAACCGCCAACAACCGGGCTGGAAGAAGTCTATTGTTTACACAAGTGCACGGTTCAACTGCAGCGAGTGTGGAAGACGCTGGTCTTCCAACAAGGTGATGGTGGTCTGCAACATGCGCCTGGCATACGGGCAGGGCGTTGTAAAGGTGAGGCCCTCCCGTCAGAACTGTAAGATTTGCAGCGACGCTCCGATGGAGAAGCCAAGCATCACCTCAGAGAACATCAAACCCCTCCTGCAGAATCTGGTGGAGAAGATAAGAATCAAATGCTACAATGAAGACCTGGGCAGAAAGAAGAAGCCCTTTAGAAGCTTTGATGCCAAAAGTCCCCATGAGCCTGCTCATTGTGAGGCCTGTATGCAAGGCATCTGTCCAAAGACAAAGTTATATTAGCAAAGCGTCAGTTGTATTAGACTTTCCCTCCTGTCATTATGTTACATTGTATTGCTTGCATCTTTTTATATGATAAAGTGCATGTAAGCTTTCATAAATGATTtattcttgttgttttttttcctgttttttgtcTTCTCAAAAGCATTAAACAAGCCTTCTCTTAAACAGAAATGTGTTAGATAATCAAAGGTTATGCAAGCAATaaactaaatgtatttgtgtt

Function

GO:

id name namespace
GO:0005576 extracellular region cellular_component
GO:0005507 copper ion binding molecular_function

KEGG:

id description
ko04610 Complement and coagulation cascades
ko05020 Prion disease

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039812102.1 True 828 mRNA 0.43 2 18682070 18683397

Neighbor

gene id symbol gene type direction distance location
mfsd8l1 mfsd8 coding upstream 740335 17928603 ~ 17941735 (+)
polr2h polr2h coding upstream 755434 17920839 ~ 17926636 (+)
LOC120566214 NA coding upstream 809659 17872278 ~ 17872411 (+)
LOC120566229 NA coding upstream 810223 17871710 ~ 17871847 (+)
LOC120566228 NA coding upstream 813268 17868666 ~ 17868802 (+)
LOC120565951 NA coding downstream 801 18684198 ~ 18685748 (+)
LOC120565634 NA coding downstream 5822 18689219 ~ 18701367 (+)
LOC120565635 LOC103364550,LOC102304031,LOC101475589 coding downstream 18497 18701894 ~ 18712465 (+)
LOC120565156 NA coding downstream 32357 18715754 ~ 18733910 (+)
LOC120566166 pfn2,LOC102788235,LOC101065608 coding downstream 164840 18848237 ~ 18857894 (+)
G96372 NA non-coding upstream 22189 18659642 ~ 18659881 (+)
G96361 NA non-coding upstream 60728 18619558 ~ 18621342 (+)
G96353 NA non-coding upstream 68810 18613029 ~ 18613260 (+)
G96341 NA non-coding upstream 95105 18586628 ~ 18586965 (+)
G96273 NA non-coding upstream 789672 17891652 ~ 17892398 (+)
G96398 NA non-coding downstream 61119 18744516 ~ 18744857 (+)
G96399 NA non-coding downstream 65723 18749120 ~ 18751861 (+)
G96417 NA non-coding downstream 98797 18782194 ~ 18859921 (+)
G96438 psmd1,LOC107550672,LOC106613492 non-coding downstream 340886 19024283 ~ 19029464 (+)
G96445 psmd1 non-coding downstream 372944 19056341 ~ 19057812 (+)
nmur1a LOC103368681,LOC104952433 other upstream 16957 18646703 ~ 18665113 (+)
nppc nppc,LOC104932751,LOC103372810 other upstream 822659 17855631 ~ 17859411 (+)
kdm4b kdm4b,LOC104945107,LOC108234360,LOC108412081 other upstream 2305621 16320494 ~ 16376449 (+)
kcnn1b LOC104945110,LOC103355562 other upstream 2381070 16289823 ~ 16301000 (+)
LOC120564959 LOC104946909,LOC103360792,LOC102294988,LOC101486556,LOC102197099 other upstream 3049258 15523929 ~ 15632812 (+)
G96418 tsc22d2 other downstream 99203 18782600 ~ 18785636 (+)
G96513 NA other downstream 847370 19530767 ~ 19531677 (+)
prkacba prkacb other downstream 1865602 20548999 ~ 20564824 (+)
LOC120565275 ctxn1,LOC108166259,LOC106954365,LOC103138526,LOC104947303,LOC105353898 other downstream 2727939 21411336 ~ 21441558 (+)
lsm7 lsm7,LOC102793261 other downstream 2871497 21554894 ~ 21557731 (+)

Expression


Co-expression Network