usp1


Basic Information

Item Value
gene id usp1
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 12450052 ~ 12459145 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039812104.1
TTTCTGCTTATATAATTTAACGCAAGTCTACGCACATTTGCAAGCATTACGTTTAAGTTTAATATTAGATGTGACCGTTATTCGAACATTTTTTGCCggatgttttgttgttgtgtgtcggTGTTTCACTGGCAATGTAGCCACCAGCCACCATTAGTGGGTCTTCCAATAGGAAAAAGCGCCAACTGCTTTTTCTACACCGTCTGAATCGTCAAACAAGTAAATGGCTCAAAAACTGGATATTTCGTGAAATATATGAAACTTCAAAGTGGATTAACTCATTCAGGTACCGGAAAAAGGATGCCAGGTCTGCAGGGGGAAAATGTTGTGGCTGCGCTAGGGAGCCCCATCAAGAGGAGTAAACTGTCTCTGAAGTTCCTCCAGAAGAAAGAAACCAAACGGGCTCTGGATTTCTCTGAACCTCAAGCAGATGAACCCAAAGCAGATGAACAAGAGGAGCCTGAGGCAAGCAGCTGCGATCAGGTGGTCCCTGGTCCTTCTCCATGTCCAACCTCACCTGGCCTTCTGCTCCCATCTGAGAAGAGAGAGACCTTGGTGCCATTTGTGGGGCTCAACAACTTGGGCAACACCTGCTATTTGAACAGCATCTTACAGGTGCTGTACTACTGCCCAGGGCTCAGAGACGGTGTTAAGAAACTGTACAACCTGtctaaaagaaaagacaaaccaAAGGAAGAAACTGATAAAAGCGAAGAGCAGTCAGAAGTTGTGGCTGAAGATGTGTCTGCTCAAATTGAGCTCCTTGGGAGCTTCAGCGGTCTGATAGCATCAGTGGAGCAGCTGCAGTCCAGCTTTCTGTTAAACCCCGACAGCTTCAGTGATGGAGAACTCGCCACTCCGCCTCGAAAAATACTCCACACACTCAGGCAGCTGAACCCCATGTATGAGGGCTATCTTCAGCATGACGCCCAGGAGGTGCTGCAGTGCATcctgggaaatatccaggagGCTTGTGTCACCATCAGAAAGGAGTTGGATCGGGAGGATGCCGACGAGACTGAGGTTAAACTTGAGGCTGGTGTCCATTTGGGTTCAAGCAGCCCTGCGACAGAATCCAAAACTCCCCCAGAAGAGGACGGCCAAGTCAGTGGCAAGAGAAAGAGTGACACTGAAGTGGGAAATGCTAAAAAGAAGCCAAAATCTGTCAAGTCTGATGAAGAGGATAATAGACCCTTCACACGCTCCAAAAGGAAGTCCTCCAGTGACATCACAATGGACAGCACCCGGGACAAAGATAAAGAGAAGGCGGAGAATGAAGGGATGAAGAAACTGAATGGGGAGGAGGACAAAGGGAGTGACAGTGAAGGGAAAGGTGAACATGCACCTAAAGAGTCTGatgggaaaagaaagaagagatcTAAGCTGAGCTGGCTGAGGCCTTCTGGGAAACAGCCGAGTATTTTCTCCAAGTTCCTCAGCGTGGGGAAGATCAGCTCCGCGAGTGTGAAGAACCAAAACAAACCAGAGCAGGAGAATGGACTGAGCGACGACCAAAGTCCGAAGGAGAAGACCAGTGTGGAGAGTTCACCACACAACGTGGCTGAAGACAAGAAGGCAGGAAAACTTCACGAGGGCCTGGACCTGATGGAGCACTTGTTCCAGGGCCGGCTGGTTCTTAGGACTCGCTGTCTGGAGTGCGAGAGCttcacagagaggagagaagacttCCAGGACATCAGCGTCCCAGTGCTCGATGACGAACCCAGCAGCCCAGACGACCTTTCTGATGTCTCTCCTGATCCCAAACCAGAGGTGAAGACACTGAAATGGGCCATCGCCCAGTTTGCTTCAGTGGAGCGCATCGTTGGGGAGGACAAATACTTCTGCGAGACGTGTCACCATTACACCGAGGCTGAGAGAAGTCTGCTGTTTGACAAAACTCCTGAAGTGATCACCATTCACCTGAAGCGCTTCTCTGCCAACAGTCTGGACCTGGACCCATATGCAGGTCTGTCCAAAGTGAACACTCCCTTGCAAACCCCGCTGACCTTGTCTCTGGAGGAGTGGTGCACCCGGCCCTCGTCCACCGATGGCCAACGCTATCAGCTGTTTGCCGTGGTCATGCATAGTGGTGTCACCATCAGCAGCGGCCACTACACCGCCTTCGTCCGCATGTCTGATCTGAAAGAAGCGAAGCTCCTGCTGCAGGACAGAAAAGAAAccgaggaagaggagagggagagtaaAGAGGAAACGCGGGTGAAAGACAAAGCCCTGGACTACGATGATGGGGAGGTGTCTTTCAGCCTGAATGCGAGGGGTCAGAGGGGCGCAAGTTTGGCTAGCAGCAAAACACGAGGAAAGAAGCTGTCGGAGGGCGGGGTTGGACTCCTGGGGGGCCAGAGGAGTCTGTCTAGCTGTGCGCTTGGCAGCAGCAAACGCACGGAAAAAGCCGCCAGCAGTGGATCAACCGAGGGATCCAAACGGAGGAAACCCGTCAACCGCACGGGCCAAAACACTGAAGCAGGACTAAACAAGGAGGCTAGGGTAGGAGAGGAGGAATTAACTCCTTCCCGTGGCGGCGTGGAGGCCACCGAGCAGCAGGCTTTGAACAGCCTCCTTGAATATGAGGGCAAATGGCTGCTGTTTGATGACTCGGAGGTGCGTTTGTTTGAGGAAGAGGATTTCCTGCAAGCCTGCTCTCCTGAGACGTCCTCGTCATCGACGCCGTACCTGCTGTTCTACAGAAGGATGCCCGAACGCGGACGCTAACGTGAACACTGTGCACGCTGTTGACTGACTGGGGGTGTTGTTGTGCCAGACTGCTCTTTGGCAGCTGGACACCCAGACAGTCTATTTGCAATACTAGAACGACTGCCAAGAATACTGTGGCAGTGATATTAGCAACTGGACTGAAGAGACCTTTCACAGAGCAAACAGTCTGGTCTCCGTGTGGGACCAAGGCTGTTTAGAGCTGTTAGTGGACTCTCACCTCAGTCTGTCTGTTAATTTAGGTTCAAAGTCATATTTTAGAAATACTCCCGACAACTTTCTACGTACTGGGATTACTTCACCTTTTGagaggatttttctttttttatgtgacCCTTGCCTTTTGTAAACTTTAAGTACAGTGAGCTGCCTTTTTCCTGTCTGTACTAATATTTCTTGGACACTGGCTTTGATACTTTCTCTGTCATCTACACATGTcacgt
>XM_039812105.1
TTTCTGCTTATATAATTTAACGCAAGTCTACGCACATTTGCAAGCATTACGTTTAAGTTTAATATTAGATGTGACCGTTATTCGAACATTTTTTGCCggatgttttgttgttgtgtgtcggTGTTTCACTGGCAATGTAGCCACCAGCCACCATTAGTGGGTCTTCCAATAGGAAAAAGCGCCAACTGCTTTTTCTACACCGTCTGAATCGTCAAACAAGTAAATGGCTCAAAAACTGGATATTTCGTGAAATATATGAAACTTCAAAGTGGATTAACTCATTCAGGTACCGGAAAAAGGATGCCAGGTCTGCAGGGGGAAAATGTTGTGGCTGCGCTAGGGAGCCCCATCAAGAGGAGTAAACTGTCTCTGAAGTTCCTCCAGAAGAAAGAAACCAAACGGGCTCTGGATTTCTCTGAACCTCAAGCAGATGAACCCAAAGCAGATGAACAAGAGGAGCCTGAGGCAAGCTGCGATCAGGTGGTCCCTGGTCCTTCTCCATGTCCAACCTCACCTGGCCTTCTGCTCCCATCTGAGAAGAGAGAGACCTTGGTGCCATTTGTGGGGCTCAACAACTTGGGCAACACCTGCTATTTGAACAGCATCTTACAGGTGCTGTACTACTGCCCAGGGCTCAGAGACGGTGTTAAGAAACTGTACAACCTGtctaaaagaaaagacaaaccaAAGGAAGAAACTGATAAAAGCGAAGAGCAGTCAGAAGTTGTGGCTGAAGATGTGTCTGCTCAAATTGAGCTCCTTGGGAGCTTCAGCGGTCTGATAGCATCAGTGGAGCAGCTGCAGTCCAGCTTTCTGTTAAACCCCGACAGCTTCAGTGATGGAGAACTCGCCACTCCGCCTCGAAAAATACTCCACACACTCAGGCAGCTGAACCCCATGTATGAGGGCTATCTTCAGCATGACGCCCAGGAGGTGCTGCAGTGCATcctgggaaatatccaggagGCTTGTGTCACCATCAGAAAGGAGTTGGATCGGGAGGATGCCGACGAGACTGAGGTTAAACTTGAGGCTGGTGTCCATTTGGGTTCAAGCAGCCCTGCGACAGAATCCAAAACTCCCCCAGAAGAGGACGGCCAAGTCAGTGGCAAGAGAAAGAGTGACACTGAAGTGGGAAATGCTAAAAAGAAGCCAAAATCTGTCAAGTCTGATGAAGAGGATAATAGACCCTTCACACGCTCCAAAAGGAAGTCCTCCAGTGACATCACAATGGACAGCACCCGGGACAAAGATAAAGAGAAGGCGGAGAATGAAGGGATGAAGAAACTGAATGGGGAGGAGGACAAAGGGAGTGACAGTGAAGGGAAAGGTGAACATGCACCTAAAGAGTCTGatgggaaaagaaagaagagatcTAAGCTGAGCTGGCTGAGGCCTTCTGGGAAACAGCCGAGTATTTTCTCCAAGTTCCTCAGCGTGGGGAAGATCAGCTCCGCGAGTGTGAAGAACCAAAACAAACCAGAGCAGGAGAATGGACTGAGCGACGACCAAAGTCCGAAGGAGAAGACCAGTGTGGAGAGTTCACCACACAACGTGGCTGAAGACAAGAAGGCAGGAAAACTTCACGAGGGCCTGGACCTGATGGAGCACTTGTTCCAGGGCCGGCTGGTTCTTAGGACTCGCTGTCTGGAGTGCGAGAGCttcacagagaggagagaagacttCCAGGACATCAGCGTCCCAGTGCTCGATGACGAACCCAGCAGCCCAGACGACCTTTCTGATGTCTCTCCTGATCCCAAACCAGAGGTGAAGACACTGAAATGGGCCATCGCCCAGTTTGCTTCAGTGGAGCGCATCGTTGGGGAGGACAAATACTTCTGCGAGACGTGTCACCATTACACCGAGGCTGAGAGAAGTCTGCTGTTTGACAAAACTCCTGAAGTGATCACCATTCACCTGAAGCGCTTCTCTGCCAACAGTCTGGACCTGGACCCATATGCAGGTCTGTCCAAAGTGAACACTCCCTTGCAAACCCCGCTGACCTTGTCTCTGGAGGAGTGGTGCACCCGGCCCTCGTCCACCGATGGCCAACGCTATCAGCTGTTTGCCGTGGTCATGCATAGTGGTGTCACCATCAGCAGCGGCCACTACACCGCCTTCGTCCGCATGTCTGATCTGAAAGAAGCGAAGCTCCTGCTGCAGGACAGAAAAGAAAccgaggaagaggagagggagagtaaAGAGGAAACGCGGGTGAAAGACAAAGCCCTGGACTACGATGATGGGGAGGTGTCTTTCAGCCTGAATGCGAGGGGTCAGAGGGGCGCAAGTTTGGCTAGCAGCAAAACACGAGGAAAGAAGCTGTCGGAGGGCGGGGTTGGACTCCTGGGGGGCCAGAGGAGTCTGTCTAGCTGTGCGCTTGGCAGCAGCAAACGCACGGAAAAAGCCGCCAGCAGTGGATCAACCGAGGGATCCAAACGGAGGAAACCCGTCAACCGCACGGGCCAAAACACTGAAGCAGGACTAAACAAGGAGGCTAGGGTAGGAGAGGAGGAATTAACTCCTTCCCGTGGCGGCGTGGAGGCCACCGAGCAGCAGGCTTTGAACAGCCTCCTTGAATATGAGGGCAAATGGCTGCTGTTTGATGACTCGGAGGTGCGTTTGTTTGAGGAAGAGGATTTCCTGCAAGCCTGCTCTCCTGAGACGTCCTCGTCATCGACGCCGTACCTGCTGTTCTACAGAAGGATGCCCGAACGCGGACGCTAACGTGAACACTGTGCACGCTGTTGACTGACTGGGGGTGTTGTTGTGCCAGACTGCTCTTTGGCAGCTGGACACCCAGACAGTCTATTTGCAATACTAGAACGACTGCCAAGAATACTGTGGCAGTGATATTAGCAACTGGACTGAAGAGACCTTTCACAGAGCAAACAGTCTGGTCTCCGTGTGGGACCAAGGCTGTTTAGAGCTGTTAGTGGACTCTCACCTCAGTCTGTCTGTTAATTTAGGTTCAAAGTCATATTTTAGAAATACTCCCGACAACTTTCTACGTACTGGGATTACTTCACCTTTTGagaggatttttctttttttatgtgacCCTTGCCTTTTGTAAACTTTAAGTACAGTGAGCTGCCTTTTTCCTGTCTGTACTAATATTTCTTGGACACTGGCTTTGATACTTTCTCTGTCATCTACACATGTcacgt

Function

NR:

description
ubiquitin carboxyl-terminal hydrolase 1-like isoform X2

GO: NA

KEGG:

id description
K11832 USP1; ubiquitin carboxyl-terminal hydrolase 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039812104.1 True 3176 mRNA 0.51 9 12450052 12459145
XM_039812105.1 False 3173 mRNA 0.50 9 12450052 12459145

Neighbor

gene id symbol gene type direction distance location
ebna1bp2 NA coding upstream 388427 12056138 ~ 12061625 (+)
ap1m3 LOC104919037,LOC103355575,LOC103463064,LOC107392936,LOC106528254 coding upstream 435618 11981529 ~ 12014434 (+)
c9h1orf210 LOC104958367 coding upstream 469766 11970363 ~ 11980286 (+)
ddah1 ddah1 coding upstream 533479 11834555 ~ 11916573 (+)
LOC120565976 col24a1 coding upstream 663119 11684362 ~ 11786933 (+)
angptl3 angptl3 coding downstream 35609 12494754 ~ 12499047 (+)
atg4c atg4c coding downstream 53461 12512606 ~ 12522434 (+)
foxd3 foxd3,LOC102785247 coding downstream 202774 12661919 ~ 12663893 (+)
alg6 alg6,LOC102784959 coding downstream 211076 12670221 ~ 12690258 (+)
efcab7 efcab7 coding downstream 243999 12703144 ~ 12717685 (+)
G94813 NA non-coding upstream 530015 11916631 ~ 11920037 (+)
G94779 clg17h1orf52,LOC104926352,LOC103370521,LOC101473273,LOC102790030,LOC102310746 non-coding upstream 790980 11651522 ~ 11659072 (+)
G94747 NA non-coding upstream 872791 11576788 ~ 11577261 (+)
G94706 NA non-coding upstream 1209815 11238444 ~ 11240237 (+)
G94691 NA non-coding upstream 1255122 11194647 ~ 11194930 (+)
G94997 NA non-coding downstream 406767 12865912 ~ 12866251 (+)
G95002 NA non-coding downstream 536090 12995235 ~ 12995654 (+)
G95027 jak1,LOC102785183 non-coding downstream 648544 13107689 ~ 13112320 (+)
G95040 NA non-coding downstream 687160 13146305 ~ 13146795 (+)
LOC120564967 NA non-coding downstream 913299 13372444 ~ 13375668 (+)
lrp8 LOC103355569 other upstream 6972 12161638 ~ 12443080 (+)
znhit6 znhit6,LOC102790327 other upstream 628170 11789135 ~ 11821882 (+)
LOC120565923 LOC103370579,LOC100695501,LOC102794561,LOC101470646,LOC102226407,LOC102291616 other upstream 991906 11359690 ~ 11458146 (+)
si:ch211-162e15.3 LOC103376230,LOC100712485,LOC108238459,LOC102795316,LOC102207055 other upstream 1501736 10946932 ~ 10948316 (+)
G94598 NA other upstream 1508808 10916925 ~ 10941244 (+)
ror1 ror1 other downstream 283660 12742805 ~ 12865842 (+)
raver2 raver2 other downstream 546423 13005568 ~ 13100445 (+)
G95046 NA other downstream 713880 13173025 ~ 13220372 (+)
LOC120565776 NA other downstream 876589 13335734 ~ 13342098 (+)
LOC120564964 LOC102797871,LOC101481459,LOC102301033,LOC106675533,LOC102797273,LOC102300313,LOC102200286 other downstream 920253 13379398 ~ 13382747 (+)

Expression


Co-expression Network