LOC120565966 (LOC101466472,LOC102777579,LOC108238401,LOC101066382,LOC106527066)


Basic Information

Item Value
gene id LOC120565966
gene name LOC101466472,LOC102777579,LOC108238401,LOC101066382,LOC106527066
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 10681539 ~ 10691086 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039812123.1
actctgtgataataaaaacaactggagactgtgcaGCAGAtttatgggtctgataacattttattaaatcagaatcgGACCATAGGCTAGTGTTTCTGTCACtccctgttcagcctgaaggctgctggaatcggctggaaaactgtccgacttgacagcggatttttttcttcagttcatctcgaacgagcctattttgccttgttgttgttattgttgccaACTACAGTCGCTAAAGCGTAATGGAGACCGACTTGCCTTTCTCATCTCGTCGGTCACCTGTGGTGTGTTTACACGGCTGCGTGGCGTCCAGTCAGCGGCTAGCTTCTAGTATAGGAGTCGacATCCTGAAGCGTGGGGGTAATGCAGCAGATGCAGCGGTTGCCATTGCAGCAGCGCTCGCGGTAACCGAGCCGTTCAGCACCGGTCCGGGCGGAGACGCCTTCTGCTTGTTCTACAACGGAAACACTGGAGAGATCAGAGGGATTAACGGCAGTGGTCGTTCGCCCAGAGCTCAGACCCTGGACTTCCTGGAAGGACTTGGTTACACTGCGGAGACCCCCCCTTCACCTTCCGATGCCTTGAATGTCACAGTACCAGGGGCCCCTGCATGCTGGTGCGACACCGTACAGCTGTTTGGTAGTCAcaagCTGTCCTTGCAGGAGGTGCTGAGCGGGGCGGCAGAGCTTGCAGAGGTGGGGTTTCCTGTTGCCGAGGTAACAGCTCACCACTGGGAAAAATTGGTGGCTGCTCTGAGAGATGCTGGGAAGGAACTAAATAGAGACCTGCTGATTGATGGTCATGCGCCAAAATGTGGACAAGTATTCAGAAACCCTTCCCTGGCCAAGACTCTGAAGGAACTGGGTGAGCGGGGGAAACCAGCTTTCTACCAGGGCAGAGTGGCCGAAGCCATCGTCGATATCATTAACCAAAATGGAGGAGTCATGACTCTGGATGACCTCAGCAGCCATGAAAGTGAGGTCGTCACCCCCATAAGCACAGAATACAAGGGTGTGTGTCTATGGGAGCCTCCTCCGAACAGCCAGGGATTGGTTGCCCTGCTACTGCTCAACATTCTGGAGAACTTTCCTCTCAGAGCTGCAGGCCACAACAGCTCTGACTACATCCATGTACTGGTGGAGGCCGTGCGCTTGGCACAAATAGACGCCCTGTGTTACCTGGGCGATCCAGACCATGTTACCATCCCTCTGGAAACCTTACTGGACAAGAGCTACAGTCACCAGCGAGCGCAGCACATCAGCatggacagGACCATGGAAGGAGTGCAGCCTGGCTTGACCGGAGGATGTGACACAGTCTATTTCTGTGTGATTGACAGTCAGGGCAATGCCTGTTCTTTCATCAACAGCATATATGCTGGCTTTGGAACTGGGCTGGTCCCTAAGGATTGTGGATTCTCACTCCAGAATCGTGGTGCCAACTTTTCTCTGCATCGTAACCATGTTAATTGTGTTGCTGGGGGGAAGCGGCCATATCACACCATAATACCTGCACTTCTCACTGACTCTGCAACCACATCACAAAAACCACGACTCCTCGCTGCACTGGGGGTGATGGGGGCTTTTATGCAACCTCAAGGACACGTCCAGGTGTTGTTAAACATGTTGGAGTTTGGGATGAATCCTCAACAAGCTCTGGATGCACCAAGAGTCTATGTACAGTATGACCGCACAACTGATGAGTGGTCTGTTAATCTGGAGGAGGGGGTCCGCCAGGAGGTAGCCGAGGAGCTGAGAAGACGGGGCCACAAAGTCagctggccaatcacagGTCACAAGAGGTCTCAGTTTGGGCGGGGACAGATCATCACAGTAGGGGATTGGTGGAACCCATCTGTCAATCAAGCCGATGGTCCATGCAGGGTGCTGTGGGCGGGATCAGACCCCAGAGCGGATGGATGTGCTCAGGGATATTAAACATACctgacctcctctcctcttccctgcAGATGTAATATTCTGATAAACTGATTACAAAACTTTCTGAAGGCAAAATCCTTTATGTGTAGAGCAAAAGTACTATACATATTTGGTGGTAATTTACAGTAACCTTTTTCCTTTGGTTTCTTTAATTAGAGGATTGGTTTTATGACAACAACTTAGGTTTATAACACAGTCATAGCACCGCATCATAGCATAGCACATAAGTGTCTTTATTCATCATATGTCCCTCCACATCCTCTTAAGTCCAAATTGAAAAACAAATCTTTGTGTGACATTACATGACATACCAAAGATGCCCTTCTTCAACCCTGGTTGAGATAATGATCTGTTTCAATGTCTTTAATTAGTTGCTGCCGGTCTAGAAACGACAACAATATCATATACATATAACCCTCTTTCCTCAATGAAATGATGATCAAAtcataggctatatatataatCTTTTCTCTGGATGactttttacaaaacaaattgAATTTAGATAATGTAATGTGATTCAATTCAATCAGTGTTATATCTTCATTCAAGTTCCCTTTGCATCATTTTCTTGCActttaaactaaaatatatttacagattTAACAGTCTGCATTTCAAGTGATGCTGAATCTATTCATGATTTTGTAAATCTTTTAACATtgacaaataaatgtaatttattttcaa

Function

NR:

description
uncharacterized protein LOC101466472

GO: NA

KEGG:

id description
K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039812123.1 True 2630 mRNA 0.47 12 10681539 10691086

Neighbor

gene id symbol gene type direction distance location
slc25a24 slc25a24,LOC104951356,LOC104935995 coding upstream 12653 10653639 ~ 10668886 (+)
henmt1 NA coding upstream 54500 10617375 ~ 10627039 (+)
LOC120565623 NA coding upstream 72313 10592837 ~ 10609226 (+)
LOC120565703 NA coding upstream 127687 10543708 ~ 10553852 (+)
zmat3 zmat3 coding upstream 178473 10493529 ~ 10503066 (+)
tm4sf18 LOC100702951,LOC102305373,LOC101466751,LOC102228636,LOC103155263,LOC104936000,LOC103374892,LOC105936905 coding downstream 4937 10696023 ~ 10714882 (+)
LOC120566058 LOC103374891,LOC102305063,LOC100702684,LOC101467020 coding downstream 31816 10722902 ~ 10733961 (+)
LOC120566056 LOC103374891,LOC100702684,LOC101467020,LOC102305063 coding downstream 57843 10748929 ~ 10759929 (+)
LOC120565506 NA coding downstream 414055 11105141 ~ 11107198 (+)
ccdc17 NA coding downstream 531436 11222522 ~ 11237901 (+)
G94515 NA non-coding upstream 150158 10530696 ~ 10531381 (+)
G94450 NA non-coding upstream 172001 10507652 ~ 10509538 (+)
G94426 NA non-coding upstream 276306 10339236 ~ 10405233 (+)
G94427 NA non-coding upstream 322751 10346197 ~ 10358788 (+)
LOC120565491 NA non-coding upstream 384281 10204140 ~ 10297258 (+)
G94587 NA non-coding downstream 20117 10711203 ~ 10711496 (+)
G94604 NA non-coding downstream 257417 10948503 ~ 10948822 (+)
G94609 NA non-coding downstream 272462 10963548 ~ 10977065 (+)
G94613 NA non-coding downstream 305391 10996477 ~ 10997201 (+)
G94674 NA non-coding downstream 410242 11101328 ~ 11101569 (+)
atp11b atp11b other upstream 266713 10363462 ~ 10414826 (+)
LOC120565490 NA other upstream 521658 9985719 ~ 10159881 (+)
ttc14 ttc14 other upstream 733302 9933613 ~ 9948237 (+)
G94376 NA other upstream 778350 9902285 ~ 9903189 (+)
LOC120565620 NA other upstream 835264 9844271 ~ 9846275 (+)
G94598 NA other downstream 225839 10916925 ~ 10941244 (+)
si:ch211-162e15.3 LOC103376230,LOC100712485,LOC108238459,LOC102795316,LOC102207055 other downstream 255846 10946932 ~ 10948316 (+)
LOC120565923 LOC103370579,LOC100695501,LOC102794561,LOC101470646,LOC102226407,LOC102291616 other downstream 668604 11359690 ~ 11458146 (+)
znhit6 znhit6,LOC102790327 other downstream 1098049 11789135 ~ 11821882 (+)
lrp8 LOC103355569 other downstream 1470552 12161638 ~ 12443080 (+)

Expression


Co-expression Network