LOC120565974


Basic Information

Item Value
gene id LOC120565974
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 37491661 ~ 37512914 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039812140.1
CCAGACCCGTTTAACGAGACGGAccgtttttttagttttttttatgatgaGTGTGAGTATTCCTACTCGACCTCATTCCTCCACCGAATCCATCTCCTGTGCGCATGGGACGCACCGAGTTGGCACGGGGTTTTTTGTTACTTGAATCGGACACATGAAGAGGAGCTGATGAAGAAACTCGCTGCAGTTATTGACTATCTTGACTAAGAAGGCTTTTGTCGTTTCGGTGGATACATAAACACGCAATGGATCAGGAGGAAACAATGGACTTCAAGGCCCTGAGGGCCAGGTTCCAGGAGGAAGAACTCTTCCCGAAGCAACCCAAGACCAAACCTGCTACACTGGAGAAACCAAAGTTTGTCCCACCTCCCCCCCAGAGCCCCCCACACTACCTCCCTGCTGGATCACGCACCTCCCTGCTCACCGCCATCAACCAGAACCTGGAAGCGCAGACAGCGGGGGCCCCCAGAGTGGTCTTCAAGGAGGACAAGAAGGAGAGCAAAAAGCCTCTCATCCAGATTAACTCTAAGGGAAAAGACAAGAGTGAAGGGAAGCTGAAAAAAGCGAAAGACAAGacaacaaaaggaaacaaagagaAGCTTGAGGACTCTTCCGCAGatcagaagaaagagaagaggctCCCACTGCTCCCCGGAGCTCCTAAGGAGAGCACTGCAGAGCTGGTGCCAGCCACGCCTCCTCCCAAACCCACGccacagaagaagaagggcTTCCTGGGTTTCAAGAGGTCATCAAAAAGAGATTCAGTGGTGCTCCCAGCAGAACCCTTCTTAGACACCCCCAGCTCAGACGTTCCTGGACCTGCTCCACTTATCCCAGTACCTTCAGACTTTGGTGATGCACCACCAGGGGCTGAAATCGCCCCACCAAAGGCCCTTCAACCAAAGGCCCTTCTACCCAACATTCCCACCTTTCCTGACTCGAGCGCTGCAGTGGAAATTACCCCGCCCTCCACTATCCCGGCCCCTCTGGACTTCACCCCACCTCCTGCCTTTATTCCTGATATCCCAGCTCCCGAAGTTCCAACCCCAGAGAGGAAAACTCCACTTGAACTACAAGCTCCCGCCCTGGCCGTTTCCAGGCCTCCCAGCCAAAATGAAATCATTCCCGATCCACCCAGCGCTCCCCCGACCCCTCCGCCCAGACGTGCCGTCTCGGCTTCTCCTCCGGCGACCTCCACTCCCTCTACGTCACCTCCTGAGCCTGAGATTGCAGCTGAGGCTGGTATAGAGGCTGCAAACATAGCTGCGGTGGCgacgcctcctcctcctcctcctcctccagtaaCAGACCCTGCGTCCATTCCGCCGTCTCCCAAAGCTGAGCGTCCCATCTCGGCGCTCTCAGCCCTCTCCAGGGCGGAGGACATGGGCCCAGTGAAaaggatgtctgtgtgtgaccaGAGGATCTTCAATGCTCTGGAGAAGGCCCGCAGGAAGATCAGCCCGCCGACAAACCCCTCCCCATCCTACTCCATCACCCCACCTCCCAAAGAGCTCCCCCCGAGTCCCACCGGCTCTCTCCCGGACCTCCCCCCCGTTGATTATAGGGGGAAGGCCCTCCCACCGAAACCAGTCAACGGCCTTGACCACGGAGTCCCTGAGGAGGGGTCCGACACTTTGCCAGAGCTGTTGGTGGTTCCGCCTCCTCTCCCCAAGAAGGTCCTCCCGAGCCCTCCGTCTCTGGGTCCCGCTCCAGAGAAGCCAGTCAGACCTCCCTCTGTCAGCCCGGGTGCAttcatctctcctcctcctctggaaGAAAATGAGATCCTTGATCCTTCTGAATTCTCAGAGACGGACGCCACAGACCTCCCAGAGTTTGACGATGTGACCTCAGATGCCTATTCCCCAGAGCCGcgggtgtcggactgggggaACACCGGTCCAGATAATCCAGACGGACAGAACCTGCCAGAGTTTGACAGTAACGGGCTAACTCCTCCAGGAGCCGAGGCCCATGCAGCACCAGCATCTGGGGACGAATACCAAGATAACCCACTACCTGaatcctctttccctctctctcaggaATCTCCACCACTGGCGGGGCTCCAAGCTGAAGTCGGCAACGGTGTCTATGAGAGTACAAACAACCTCTATGAGGACGTCACCTCGTCTGCCGCCAAAAAGAAAGCAAAGGCTGACGGTGGCAAGAAACGCAAAGGACAGCCAAAGAATCCATATGGCGAGGCACAACAGGAAACGaATGAAGAGAAAAGCAAGCTGGGCCGGTTCAGCAAGTCCGAAAAGAAAGACGGGCCGGATGAGAAAGAgctgaaaaagaaagagaagcagcgcctggaaaaggagaagaaggagCTAAAGGAGAAACAAGAGCGGGAAAAGAAagagcagaaagagagggaaaagaaGGAAATCGATATGAAGAAGAAATTCAAAATCACAGGACAGGAGCGGGCCATGTACCAGGCAAAAGCAACTGTGACGACCAAGGCACGTAAGAACGATCTGCCCCTCAACAGCGGTGACATCCTCAGCATCATCCGGACAACCAACTGTCCCAAAGGGAAATGGCTGGCCAAGGACAGCAGCAACAACTATGGATATATTGCAGTGGATCATGTGGAGCTGGACATCAAGGAGATGTTGGAGCTGGGAAAGAAGGCTGCCATCACTCGTAAGAGCGTTCTAGAGGAGGAGGTTACCAGCCCGGGCAGCAGGGCCTCAAACCACTATCCAATTTCAGCAGAAAGTTTCTCAGATGACAGTGAGGAGTGGACCGGTGACGATGACGACCCTATCTCGCCTACCTCTGAAACGGCAGACCCACTGGCTCCAATGGGCCACACCAGGACACTCTCAATGCCAGACATGGgAAACAAAAACCTTAGTGTAAACCACCAGCACAGTCAAAGTGACCTCGCAGATGGCACCCATGTCCAAGCAAGACATGAAGCACTTCAGAAGTTGACCACGTTTTTCCATTCACCTAAACCTGTTGAGCCAGCTGCCAGCAGCACTGAACCAGAGACAAGTCCGGTGCTTGTAAAGGAGAAAGCAGTTTCCTCGTCTGAACCTAGTTCAACACAGGAAATGGATTTTGATCAAACTGATATGCCCATTTTACCCCCTCCTGACCTGTATGCTTGACTTGACTGCTGAGAAATTATCATAAAACAAGGACAAAAAGCAGCCAGGCAGAGGAAACAGGATTtgcctgctgttgttgtttcttcacaCTGTGACCCGTGTCAGTCGCCTAATACTGTGACAGTCACTTCATCTTCACGACTATGACCTTATTTACCTGGGGACTGCATTTATGGATCAGTACGATGATGTAGAAGAGCAAGATAAGGAGATTTGTCGACGAGCGTTACACTATCCCAGCTCTCAGAACtctttgtttttcactttttttttgaagCACTCGCTGTGAAACCAGAGAGGGACAGTTTGCCCGGTGGCTCTGAGTGACTTTGAAACTGCTGATCCCAGGAAAGAACTTACAAACTgtcgcagaaacacacacaccctggaGGCTCTTGTAGGGAAAATTACACAGTCCGTGTGTGAATACCAGAAATCGTTTTTTGGTGGTGGATATAAGGGGAGGACAATGGAAAATCTTGAGAATCTGAGAAAATGTCTCAGGTTGAGACACCATCCTGAGAAAATACACAGCGGACACAGGCAGTGAAAATCAGGGGGAATACACTTAATGGTACACTATACACTCGTTACCCGTTTACAGTGTATTGCGAACAGAAATATAGCTGACAAACTGACAAATGAACAAAGACTTCATAGACTTTTAGGTCAGGTCATCAGCAATAATTAAAAATATCTGTGTGGCCAGCTCTACGCCACAGATGATGTGATCtattttcattaatttcatACTGCATACATTTTAGGACTCTGATTTACCTGATTTGTATTCCAAGTGTTTGGGTTACTGGGTTTACCCTCATTATTTAGTTAAAGATCATTACAGATTATGGAAGTGCTTATGTAACTACTCGCGTCATAGTACTGTATTTAAATGCTGACATATTAGGTATAGTTATGATCTTTAATGGCGTACCAATAAACAACAACATGGAGCTTGAtctaaaatatacaattttaagAATTCTAGTACCAGATGCTAAGTGTTGGTCACAGTTGAACCTTGTGGAGGGAAGCACCATCCAtgaactttattttctttctttttgtcacttttatgtcCCTTCTTTTTTCTACGACTTTCCTCCAGCTGATGAATAAGTGTTACAGAAAGTAGTGTAATGATCACCTGAGgtcattttcaatgtaaaatattattattattatctgagGGTGCTTTTTTGTCTGGAtagaaaaagacaaaactaaTCCTCTGTgatgggtgtctgtgtgtgtattgacaAAAGCCTttaggacaaaaaaaaacaaaaaacagttttccttttttaaagttttgtttattgtttttcaataaataCTCATTAAAGTGCAAATCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039812140.1 True 4492 mRNA 0.49 20 37491661 37512914

Neighbor

gene id symbol gene type direction distance location
dab1a dab1,LOC106952591 coding upstream 3523 37156476 ~ 37488138 (+)
oma1 oma1 coding upstream 350069 37127785 ~ 37141592 (+)
LOC120566223 NA coding upstream 359356 37132169 ~ 37132305 (+)
mysm1 mysm1,LOC106613979 coding upstream 377437 37108573 ~ 37114224 (+)
suco suco coding upstream 384569 37047277 ~ 37107092 (+)
plpp3 plpp3,LOC103365633,LOC104959557 coding downstream 19589 37532503 ~ 37565901 (+)
usp24 usp24 coding downstream 186140 37699054 ~ 37750195 (+)
dhcr24 dhcr24,LOC102794897 coding downstream 269670 37782584 ~ 37791624 (+)
si:ch211-121a2.4 LOC100711177,LOC104919118,LOC102794329 coding downstream 280367 37793281 ~ 37796949 (+)
aqp12 LOC104962685,LOC103357409 coding downstream 301703 37814617 ~ 37816345 (+)
G100846 NA non-coding upstream 16584 37466174 ~ 37475077 (+)
G100847 NA non-coding upstream 292206 37199237 ~ 37199455 (+)
G100749 NA non-coding upstream 388772 37100787 ~ 37102889 (+)
G100747 NA non-coding upstream 444543 37046901 ~ 37047118 (+)
G100738 LOC103354147,LOC103137061,LOC106938442 non-coding upstream 448095 37039248 ~ 37043566 (+)
LOC120566005 NA non-coding downstream 56170 37569084 ~ 37574819 (+)
G100906 NA non-coding downstream 145927 37658841 ~ 37659093 (+)
G100917 NA non-coding downstream 237947 37750861 ~ 37752138 (+)
G100926 NA non-coding downstream 253277 37766191 ~ 37766776 (+)
LOC120565000 NA non-coding downstream 296354 37809268 ~ 37813410 (+)
G100843 NA other upstream 1589 37463914 ~ 37490072 (+)
prrc2c NA other upstream 533301 36932655 ~ 36958360 (+)
G100671 NA other upstream 792792 36695437 ~ 36698869 (+)
sass6 sass6,LOC102776185 other upstream 879915 36596041 ~ 36611746 (+)
smim24 NA other upstream 957079 36495484 ~ 36534582 (+)
usp46 usp46 other downstream 1353521 38866435 ~ 38880605 (+)
prdm5 prdm5 other downstream 1810670 39323584 ~ 39361733 (+)
LOC120565708 LOC103369944,LOC100698021,LOC101482931,LOC102791229,LOC102291415,LOC102212992 other downstream 1941206 39454120 ~ 39464450 (+)
reps2 reps2,LOC102792668 other downstream 2048147 39561061 ~ 39592762 (+)
LOC120565298 cdkl5,LOC103356958 other downstream 2180998 39693912 ~ 39740277 (+)

Expression


Co-expression Network