plpp3 (plpp3,LOC103365633,LOC104959557)


Basic Information

Item Value
gene id plpp3
gene name plpp3,LOC103365633,LOC104959557
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 37532503 ~ 37565901 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039812190.1
ATGCAAAAGTACATGTATGAGAAAGCAATGGCACAAGAGACAAGGAACGGAGGAACCTCTACGTTAAATAACAACAATGGTGTTGACAACAGTAAGAAGAAGCTGCTGATAGCGCTCGACGTCTTCTGCCTTCTACTTGCTAGCCTGCCTTTCCTGATCATTGAGACTAGCACCATAAAGCCGTACCAGCGCGGGTTTTACTGTTCGGACGAGTCCATCCGCTTCCCCCGAAAAGAGGGAGACACCATTAGCGATGCCGTGCTTTGTGGTGTTGGCATTCTTATTGCCATCTTCTCTATTGTGATTGGAGAGTGCTTCAGGATTCACCAACTACATGAGGGAACCAAGTCTTTCGTTGGGAATCCCTATGTTGCAGCCCTCTACAAGCAGATGGGTGTGTTTCTCTTCGGATGTGCCGTCAGCCAGTCATTTACAGACATTGCCAAGGTGTCGGTGGGCCGTATGAGGCCCCACTTCTTAGATGTGTGTAAACCCGATTTCTCCACCATCAACTGTTCACTGGGATACATCACCAACTATACCTGCAGTGGCACAGAGAGCGATGTACAGGAGGCCAGGAAATCCTTCTTCTCAGGACATGCCTCTTTTTCAATGTTTACCATGCTTTACTTGGCTTTCTATCTCCAGTCCAGGTTTTCATGGCGTGGCGCTCGTCTCCTCCGCCCGTTGCTCCAGTTCACCCTGTTGATGATGGCCTTTTACACCGGCCTGTCCCGCATCTCCGACCACAAGCACCACCCGACCGATGTCCTTGCAGGCTTTGTGCAGGGAGCCCTGGTGGCCTACTGCATAGTGTTCTACGTGTCCGACCTGTTCAAGCCCAGGGTGAAGCCAGCCACGCCCCCGCCCTCCCCCATCAAGAAGGAGCTGCTCCCTTCGTCCGACATCATCGAGAGGAACAACCACCACAACATGGTGTGAGAGAAGGCCGCGACGTCGTCCCTGTGCCCGAGGAGCCAATCGCAGCGCTGCTCGCCTCCCATCGGACAGTAGAATGTAGCGACGAGAGACTGTAGCTGCGTCTCAAATGGCACCCTCCTCCCTTTTGCAATGCCGAGCAGGGGCGCTCACTCCATGGACTAGGGTGTCCGATTTGAGATTTTGCACAGCAGAGTCCACTCTCAATATCCAGACTTATTATTTACCATTATGTTAACTACTAATCAACATTTGAGCCCATCGTTTTTTGAGCACAAACCGATAAGAATTGGAAGACTAAACGacaaaatgatttaagaaattGATGACTTTGACAGGCAGAGCTAAAGGGTGTGGAGGTCTGATGGAAGTGTTGACAAGAAGTGAAAACACTTGTgaacaaaaatgaatgaatgaagaaaaaaaaagaaaagacaaacccCCTTGCCTGAGAGAGGGATTTCCAGTGATGCTTCCTCTCCGAACTCTCTGTGGCCTTGGAACACCGTAGGACAACAACTTCCTTAGCTACGGGAAGGATATTACTGCAATAACTAGCAGCATAGAAATATTAACAGTATAGAAAAATATAACTGATagcactgttttgttttttttaagttcattgTCCATTATCACCACTTGCTGCCTGAGACGTCTAACTGAAAGAAAACTTGATGAAGCTGACACCTGTGAGACAGAAGTATTGACTCACAGAAGCCAACCAAGCCTGTGGCGGTGGCTTCACAGGACGCCATGCGCCAGGCAGGATAAAGTTAGCATAGCATGGCTTCAATAACAAAAACCCCGTTAACCAGGAGGCCATTGTAAGGATCGCGTACTGATCTTTTCAACAGGTTTTAGAGCAGTCCTTTGGCTGTCTTTGTTCTTAACTGATAAGCAAGACGTCAGTATCCCAATAAGCTGTGTTTAGCAGTAGGAAGTGAAGCCCTCCAGCATGTACCTCTGTCTCCAGATCAGCATGTCAAGCTTTTTGTAGTGGACTCTCAGAGTGGCCCAAACCCGGGATGTTGCATTTTTCGAGGGTTAGATGTAGTAAAAGGGGGGATATTTCCTTGTGGAAGAAGGGAGGCAGATCTCCCAGCAGCTGTATAAGCGGCGTGGCTGTGCCATGCCACTTCCTGGTGTTGGTTGGCCATCTGTTTTGGCTTCCTAAACGGGAAGGGGGCGGGTGGACGGAGTGGAGGGGTGCGGGCTGTCACCGTGGAAAGAGGGTGATGAATTACAGCTAAGCTGGCACATTATTTTTGGGGATGATTTGGGCTCTTTCCGCTGGCAGGGAGGGGCTCTCACCCACCCAATCCCTCATTGgcaatggatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgtgtgtcctgTACACTCCTGTGCTTGTGGGTACACTTGTACATCTtgtgagtgtgaatgtgtgtgtacatatgtatGAGCGCTGTGAAAAGGAACCCCCTCTTGATAAACTCAGTGTGTGTCAAATGAGACACACTGTCAGCTgtgccaagtgtgtgtgtgtgtgtctgtgtgtctatgtgtgtgtgtgtgtgtgtgtgtgccactgtGTGTCAGATAGCGACAGAGCAGGTGAGCGTTACGAAAACTGTGGATctaatatttttattctcaGCTAAGAAGCATTTTTAACCTTGTATGTGTATAGCCTGTCCCGTATAATCACTAACAGTTGTACAGTACAGAAGCCCTTTTTTATTTACAGCCGACTCAGATATCCTTTAACAACACACTCCGCCATGTTGCACATCTTTCTCATCGTATAGTCCGTCCTATCATTTCACCAAGCCGTTTTCActctttttataaatatataaataatgtatagATCACTAAAGTTACTCTGTAAGATACTGTTTCTTAACATGTTTAGATATATCCACTATGATTACAGACCTGTGTTCTTTACAAAATGCTGCTTAAAAAGCATCGAATGATTTTTGTATCTAGATAACTATTGTAGATTGTTATAGTTACGTTTGTAATATGCATTCAAAAAAAAGTACACCCACAATTGTATTAAAAttcaatattaata
>XM_039812191.1
GCCGCTAGCAGAGAGGGAAGAGGGCTGAGCCTTGAAGCTGCCGGGGGAACTTGAAGAGagcagggggaggaggaggagaagaaggattGATATAACAAGAGCGGGCTGTCGATGCGCAGCGCAATTCTCACTCACTCCAAGTCTTTGAACCAAGAGCGATAAAAAGGGGAGCGGGCTTTCCATTCATTTCGAGCGGAGGCAACTTTTTCTTTCTTGAGTCCGTGGCGCGGGTCCGTTCACCAGATAATACTCAACAGCTtactatttaaaaatatatatgaaaGTGAACCACGAGACAACATCAGCAGATCTGAAACTTTACGAGACCTCCGAGTTGGGAAGTTTGTTTGTCGTTGCAtgacaatatttttatattttttttaaaaggacttGAGAACCTGACAGACTTTCTTCACCTACCGCGTGGTGTGGGATTTTTGAGCCGAATCGGGGGGGACTTCTCAAATGCAAAAGTACATGTATGAGAAAGCAATGGCACAAGAGACAAGGAACGGAGGAACCTCTACGTTAAATAACAACAATGGTGTTGACAACAGTAAGAAGAAGCTGCTGATAGCGCTCGACGTCTTCTGCCTTCTACTTGctatgCTGCCCAGCCTGGTTCTGCACCGTACCTCTGTTCGTCCATACCAGAGGGGTCTCTACTGCAGTGATTCCAGCCTCAGATACCCCTACAAGAAGAGCACAGTCCCCTCCTCAGTGCTCACTTGTGTTGGGTTGACACTGCCCGCGGTGTCCATTGTGATTGGAGAGTGCTTCAGGATTCACCAACTACATGAGGGAACCAAGTCTTTCGTTGGGAATCCCTATGTTGCAGCCCTCTACAAGCAGATGGGTGTGTTTCTCTTCGGATGTGCCGTCAGCCAGTCATTTACAGACATTGCCAAGGTGTCGGTGGGCCGTATGAGGCCCCACTTCTTAGATGTGTGTAAACCCGATTTCTCCACCATCAACTGTTCACTGGGATACATCACCAACTATACCTGCAGTGGCACAGAGAGCGATGTACAGGAGGCCAGGAAATCCTTCTTCTCAGGACATGCCTCTTTTTCAATGTTTACCATGCTTTACTTGGCTTTCTATCTCCAGTCCAGGTTTTCATGGCGTGGCGCTCGTCTCCTCCGCCCGTTGCTCCAGTTCACCCTGTTGATGATGGCCTTTTACACCGGCCTGTCCCGCATCTCCGACCACAAGCACCACCCGACCGATGTCCTTGCAGGCTTTGTGCAGGGAGCCCTGGTGGCCTACTGCATAGTGTTCTACGTGTCCGACCTGTTCAAGCCCAGGGTGAAGCCAGCCACGCCCCCGCCCTCCCCCATCAAGAAGGAGCTGCTCCCTTCGTCCGACATCATCGAGAGGAACAACCACCACAACATGGTGTGAGAGAAGGCCG

Function

symbol description
plpp3 Predicted to enable lipid phosphatase activity and phosphatidate phosphatase activity. Predicted to be involved in canonical Wnt signaling pathway; phospholipid dephosphorylation; and phospholipid metabolic process. Predicted to act upstream of or within regulation of Wnt signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane. Is expressed in somite and vasculature. Orthologous to human PLPP3 (phospholipid phosphatase 3).

NR:

description
PREDICTED: lipid phosphate phosphohydrolase 3 isoform X1

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0016020 membrane cellular_component
GO:0003824 catalytic activity molecular_function

KEGG:

id description
K01080 PLPP1_2_3; phosphatidate phosphatase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039812190.1 True 3106 mRNA 0.47 7 37532968 37565901
XM_039812191.1 False 1414 mRNA 0.51 7 37532503 37563747

Neighbor

gene id symbol gene type direction distance location
LOC120565974 NA coding upstream 19589 37491661 ~ 37512914 (+)
dab1a dab1,LOC106952591 coding upstream 44365 37156476 ~ 37488138 (+)
oma1 oma1 coding upstream 390911 37127785 ~ 37141592 (+)
LOC120566223 NA coding upstream 400198 37132169 ~ 37132305 (+)
mysm1 mysm1,LOC106613979 coding upstream 418279 37108573 ~ 37114224 (+)
usp24 usp24 coding downstream 133153 37699054 ~ 37750195 (+)
dhcr24 dhcr24,LOC102794897 coding downstream 216683 37782584 ~ 37791624 (+)
si:ch211-121a2.4 LOC100711177,LOC104919118,LOC102794329 coding downstream 227380 37793281 ~ 37796949 (+)
aqp12 LOC104962685,LOC103357409 coding downstream 248716 37814617 ~ 37816345 (+)
cep19 cep19,LOC102796355 coding downstream 270506 37836407 ~ 37838105 (+)
G100846 NA non-coding upstream 57426 37466174 ~ 37475077 (+)
G100847 NA non-coding upstream 333048 37199237 ~ 37199455 (+)
G100749 NA non-coding upstream 429614 37100787 ~ 37102889 (+)
G100747 NA non-coding upstream 485385 37046901 ~ 37047118 (+)
G100738 LOC103354147,LOC103137061,LOC106938442 non-coding upstream 488937 37039248 ~ 37043566 (+)
LOC120566005 NA non-coding downstream 3183 37569084 ~ 37574819 (+)
G100906 NA non-coding downstream 92940 37658841 ~ 37659093 (+)
G100917 NA non-coding downstream 184960 37750861 ~ 37752138 (+)
G100926 NA non-coding downstream 200290 37766191 ~ 37766776 (+)
LOC120565000 NA non-coding downstream 243367 37809268 ~ 37813410 (+)
G100843 NA other upstream 42431 37463914 ~ 37490072 (+)
prrc2c NA other upstream 574143 36932655 ~ 36958360 (+)
G100671 NA other upstream 833634 36695437 ~ 36698869 (+)
sass6 sass6,LOC102776185 other upstream 920757 36596041 ~ 36611746 (+)
smim24 NA other upstream 997921 36495484 ~ 36534582 (+)
usp46 usp46 other downstream 1300534 38866435 ~ 38880605 (+)
prdm5 prdm5 other downstream 1757683 39323584 ~ 39361733 (+)
LOC120565708 LOC103369944,LOC100698021,LOC101482931,LOC102791229,LOC102291415,LOC102212992 other downstream 1888219 39454120 ~ 39464450 (+)
reps2 reps2,LOC102792668 other downstream 1995160 39561061 ~ 39592762 (+)
LOC120565298 cdkl5,LOC103356958 other downstream 2128011 39693912 ~ 39740277 (+)

Expression


Co-expression Network