zmat3 (zmat3)


Basic Information

Item Value
gene id zmat3
gene name zmat3
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 10493529 ~ 10503066 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039812196.1
TagcattttatttcattgtatttGCCTATAGGCTATTAACTCATAGGCTATTAACAACATTATCATCACAATAGCAGCCTGGCTGTTTTCACTGCAGATTTGAGACTCATAGCCAGCCACGGGTGATCAGGGTCTACCACATAGGTGTAACATGTACACAATGTGTCATGATTGAAAACCATGCTGTTCAGCAGCGGTGGCATCGGAAATGGACTGTACCAACAAGGAGAGGGATGCTGGAGGATCCTCGGCaggacaaaaatgtaatttcgcGAGGGAAACATGTTTTTTGGTACTTAATGTGAAAATACTAACGCAATGTGTTTACATGTTGGCCATTTAAAACGTATTTTTGCTGGCTGGCGATTTCTGTATTTCGCTCTCATCTTTGAATCACCCCTCCGGTGAAAGCCTTAGTGTCTGAGCGTGTGCTAGGTACTGTCATCCTGCCTGACCGCCAGGTTTTTTGGAGAGAAGAAGTTGGAAAAGGGATGTGGCTGCGATGATGGCGCTGCAGCTGAAGAACGGGGATGCAGCGTACTACCAGACTGCGGATTACTGCAGAAATTACACTTCGCCGCCTGTCAGCTACGGTGACAGCAGCCATTATCTTGCCCGTTTGCCAGGCCCAGAGACCATGTTGAAGCCTCCACTGAGTCTCTTCCGCCATCCCCAGCAGCCTTTCCACCACATGGAATCTCTGCACCAGCTGGGACCTCCGCCAATGGCACCTACGCAGCCTCTCGGTCCACCACCCCTTGCCCCTGCTCAGGCGATTGGACCCCCAACAATGGTTCCAACCCAGACACTAGGCCCCCCTCCAATGACTGCTACTCACACGTTAAGACATCACCCCATTACCCAACCACACAGCTTAGGCCCGCCTCCAATGGCCCCATCTCAACCACTAGGGCCTCCACCAATGGCACACACCTTGGGTCCCCCACCTGTAGATCACACACAAGCAATAGTGCCTCCAACCATGGACCTCATACAACCGTTGGGGCGTCCACCTCTGAATCCTGCACAAACACTGGTGCCCCCACCTGTAGTGGCACACGGAGCCGGTCGATTCACCCTCCCTCCCAGCCCCATGTCCTCCCCTGTTGCTCCGGGCCCAGACCCTTCACACCTGCCCCCAATGCCCCGAGGACCGGCCCTCATCCAAGCCCCGATGTCCTGCCTCATTCCTGGTCCTCTCCCGGGTCAGGCAGCCCCAGCCAGCGAGCAGCCCCAGGATGAGGGCTCTCTGCTTGGGATGGAGGAGCAGGAAGACTCTCTGGGGTTGGGGGAACTGTGTAAACCACTGTACTGTAAACTCTGCAACGTTACCCTCAACTCTGCTCAGCAGGCACAGGCTCACTACCAGGGGAAAAACCACAGTAAAAAGTTGAGAAATTTCTATGCTGGCAGTCAACAGCCTCCAGCCATCAGGATTCCAGAAGTCCTTGAGGGGGCTGGCCAGACATCCCTCAGCTCAGGATCAAACGACAGTGACGGAGGCAGGCAGGCGCAGTATAAGGGGGCGACTCGGGTCATCTTGGCCACAGAGAACGACTATTGTAAGCTGTGTGACGCCTCCTTCAGTTCACTGGCAGTTGCACAGGCCCACTATCAGGGCAAGAACCACGCCAAGAAGCTACGGCTCGCTGAGGCCCAACAGAACTCCAATAACATGGAGGGCAGCAATGAGGCAGCCCCaagaagaaacagaaaagaTGGCAGTGAGTACAGACTGGTGAAAAACCGCCGCAGCCCACAGCTACCTGCTTCCATGCCagGGCCGTATTACAACCCCAGACCGAGGCAGCGCATCCCCAGGGACTTGGCCATGTGCGTGACCCCCAGCGGTCAGTTCTACTGCTCCATGTGCAACTGCGGAGCCGAGCAGGAGACAGACTTCAGGCAGCATCTGGAGAGTAAGCAGCACAAAGCAAAAGTGTCGGAGTTAAGATACCGCCACGAGATGGAGAACCTTGGCTACAGCTAAGAAACACAAGGGAGGATGGGGGAAGAGAAAAGACAGAGTGGGAAGGtgggaagacaaaaaaaaaa

Function

symbol description
zmat3 Predicted to enable nucleic acid binding activity and zinc ion binding activity. Orthologous to human ZMAT3 (zinc finger matrin-type 3).

NR:

description
PREDICTED: zinc finger matrin-type protein 3 isoform X1

GO: NA

KEGG:

id description
K10137 ZMAT3; zinc finger, matrin type 3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039812196.1 True 2055 mRNA 0.54 6 10493529 10503066

Neighbor

gene id symbol gene type direction distance location
kng1 NA coding upstream 42547 10440558 ~ 10450982 (+)
sox2 sox2 coding upstream 378207 10112982 ~ 10115322 (+)
fxr1 fxr1,LOC106531534 coding upstream 513787 9967354 ~ 9979742 (+)
LOC120565621 NA coding upstream 628074 9851125 ~ 9865455 (+)
LOC120565507 NA coding upstream 696540 9785792 ~ 9796989 (+)
LOC120565703 NA coding downstream 40642 10543708 ~ 10553852 (+)
LOC120565623 NA coding downstream 89771 10592837 ~ 10609226 (+)
henmt1 NA coding downstream 114309 10617375 ~ 10627039 (+)
slc25a24 slc25a24,LOC104951356,LOC104935995 coding downstream 150573 10653639 ~ 10668886 (+)
LOC120565966 LOC101466472,LOC102777579,LOC108238401,LOC101066382,LOC106527066 coding downstream 178473 10681539 ~ 10691086 (+)
G94426 NA non-coding upstream 88296 10339236 ~ 10405233 (+)
G94427 NA non-coding upstream 134741 10346197 ~ 10358788 (+)
LOC120565491 NA non-coding upstream 196271 10204140 ~ 10297258 (+)
G94405 NA non-coding upstream 310121 10183194 ~ 10183408 (+)
G94400 NA non-coding upstream 509685 9981422 ~ 9983844 (+)
G94450 NA non-coding downstream 4586 10507652 ~ 10509538 (+)
G94515 NA non-coding downstream 27630 10530696 ~ 10531381 (+)
G94587 NA non-coding downstream 208137 10711203 ~ 10711496 (+)
G94604 NA non-coding downstream 445437 10948503 ~ 10948822 (+)
G94609 NA non-coding downstream 460482 10963548 ~ 10977065 (+)
atp11b atp11b other upstream 78703 10363462 ~ 10414826 (+)
LOC120565490 NA other upstream 333648 9985719 ~ 10159881 (+)
ttc14 ttc14 other upstream 545292 9933613 ~ 9948237 (+)
G94376 NA other upstream 590340 9902285 ~ 9903189 (+)
LOC120565620 NA other upstream 647254 9844271 ~ 9846275 (+)
G94598 NA other downstream 413859 10916925 ~ 10941244 (+)
si:ch211-162e15.3 LOC103376230,LOC100712485,LOC108238459,LOC102795316,LOC102207055 other downstream 443866 10946932 ~ 10948316 (+)
LOC120565923 LOC103370579,LOC100695501,LOC102794561,LOC101470646,LOC102226407,LOC102291616 other downstream 856624 11359690 ~ 11458146 (+)
znhit6 znhit6,LOC102790327 other downstream 1286069 11789135 ~ 11821882 (+)
lrp8 LOC103355569 other downstream 1658572 12161638 ~ 12443080 (+)

Expression


Co-expression Network