LOC120566014


Basic Information

Item Value
gene id LOC120566014
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 9462445 ~ 9473374 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039812213.1
CAGAGCATGCAGACTTATCCTCCACTTTAACTGTGaacattataataaaatatacttgatctctgtctctgttctgcCTCCACATATGTAACCTACCATATTATGAGTACAACTCaacatttctttgtttgaagattattttttgggcttctgggcctttatttgataggacagatgaagacaggaaaggtggtagaaagaggggtgggggggggacgacgacatgcagcaaaggggccAAAACCAGACTGAAACCTGGGCCGCTGCAGGGAGGACTGAGCCTAAGTATATGGCGGCACATGCTTAACCAGACAGACTTCAATCTGAATAACTCTAAGAGGAAAAACCTTACCTCAGTCTCAAAGAGTGGAGTTCCTAAATGCAGCCattcctggatcttcacaatgagACTCTTTCACCTTCTTTGGCTTTTGATCCTGTTACTGAACAGTGATTCATCTTTACAACAGAATGTAATAACATGTAAACTGATACTGCCGCCACCCGAGGGAACCAGATATGAATCTGCTtctagaaatgtgtttttacctGGTGACACATTGAGGGTCATTTGTGGAGAGAAGTACGGGATTTCTAACAATCAGGAATCAGCAGTAACTACATGCAATGAGGATGGAGAGTGGACTATCATACCAGTATGCACAGAGGTCGTATGCAACAATCAAAGACCGCAAAATGTGTATTCCTTGGAATACAATTggtggcaacaaaaaaaaattggtgaGACTACAAGATATTGGTGTAAGATAGGCTACATGAGCACAGATGGTGCTACCCGGGCCACATGCACCAGAGATGGATGGACACCAAATCCACTCTGTCGAGAGATTGTAGGCTGTGGAAGTCCACCACCTCTCACAGATGGAGACATCAAGTACACTTTGAAAACTAATTACAGCCATCAAGAAAGGGTTGAATTCATGTGTCAAAATTACTACACCATGGAGGGTGGGCCTAACAGAACCTGCATCAATGGTGAATGGATTGGACAGATGAAATGCCTCAAACCTTGTATTGTGGATAGAGAGCTCATGAACAGATATAATATTGCCTTCAGATATACTAATTCTGATGAGCTGTATTTTGCCCATAATGATTTTATTGAGTTCACTTGTACTAAAGGAAGACACACCGGCACATTGTCCATGCGTCAGAAATGTATTGATGGTGTGTTGAGCCTGCCCACTTGTCAGTAAAGGTTTTTAGTTAACTGGATGTGATAAACATGATCTGGCTGGACAAACATGTAAACGATTAACGAGAAGTTAAGTTATTAACTGATCTTCTGTACCTACTGCAGCAGTTtgaataaaacatacatgttctcatgtttttttcttcataaatgttttattaaaggtacaatatgtaacatttctgcattaaaatgtctaaaaacga

Function

GO: NA

KEGG:

id description
K23815 CFHR1_2_3; complement factor H-related protein 1/2/3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039812213.1 True 1422 mRNA 0.41 6 9462445 9473374

Neighbor

gene id symbol gene type direction distance location
LOC120564889 rgs2,LOC103367537 coding upstream 378588 9080859 ~ 9083857 (+)
LOC120566074 LOC104935955,LOC103367504 coding upstream 391769 9067178 ~ 9070676 (+)
LOC120564878 NA coding upstream 400409 9057341 ~ 9062036 (+)
LOC120564973 LOC103367494,LOC104965670,LOC104935957 coding upstream 428765 9021517 ~ 9033680 (+)
rgs4 NA coding upstream 1247945 8208453 ~ 8214500 (+)
trnah-gug_12 NA coding downstream 98924 9572298 ~ 9572369 (+)
depdc1a depdc1 coding downstream 101884 9575258 ~ 9587669 (+)
LOC120566020 LOC103374322,LOC104940880,LOC103131468,LOC106964853 coding downstream 115782 9589156 ~ 9603575 (+)
fnbp1l fnbp1l,LOC102783810 coding downstream 141421 9614795 ~ 9671788 (+)
hps3 hps3 coding downstream 292702 9766076 ~ 9785140 (+)
LOC120566015 NA non-coding upstream 24824 9434721 ~ 9437621 (+)
G94201 NA non-coding upstream 292688 9169319 ~ 9169757 (+)
G94192 uchl5 non-coding upstream 366153 9089828 ~ 9096292 (+)
G94169 NA non-coding upstream 460739 9001456 ~ 9001706 (+)
G94167 NA non-coding upstream 461985 9000163 ~ 9000460 (+)
G94232 NA non-coding downstream 10629 9484003 ~ 9485965 (+)
LOC120566016 NA non-coding downstream 20607 9493981 ~ 9495357 (+)
G94231 NA non-coding downstream 67163 9540537 ~ 9541059 (+)
G94238 NA non-coding downstream 74340 9547714 ~ 9551691 (+)
G94259 NA non-coding downstream 188758 9662132 ~ 9679737 (+)
G94199 LOC103367571,LOC102312400,LOC100710958,LOC101467655 other upstream 293568 9147162 ~ 9168877 (+)
G94073 rgs5,LOC107393027,LOC104951458,LOC100708109,LOC105932873 other upstream 1176009 8237370 ~ 8286436 (+)
LOC120565614 NA other upstream 1557198 7896145 ~ 7905247 (+)
LOC120565294 pycrl other upstream 1572268 7878919 ~ 7890177 (+)
G93938 NA other upstream 2111858 7349810 ~ 7350587 (+)
G94239 NA other downstream 78922 9552296 ~ 9557568 (+)
G94281 NA other downstream 344247 9817621 ~ 9879198 (+)
LOC120565620 NA other downstream 370897 9844271 ~ 9846275 (+)
G94376 NA other downstream 428911 9902285 ~ 9903189 (+)
ttc14 ttc14 other downstream 460239 9933613 ~ 9948237 (+)

Expression


Co-expression Network