LOC120566056 (LOC103374891,LOC100702684,LOC101467020,LOC102305063)


Basic Information

Item Value
gene id LOC120566056
gene name LOC103374891,LOC100702684,LOC101467020,LOC102305063
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 10748929 ~ 10759929 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039812278.1
ATGCATCGGTTGTGGTTAAGTGGAGCGTTGCTGCTGTGTTGGGCAGCAGTATGTGTGTCTGGGATGAGGAGAGAATACTTCCTTAGGATAGAAGAGGTGTCTTGGAACTATGCCCCAAGCGGGATGAACTTAATTCAAAACCGTACTCTGCAGGAGGATGAAGAAGCCGCAGTGTTTTTAAAGAGTGGGCCCCAGCGTATCGGCTCCACCTACAAGAAGGCTGTGTATAAGCAGTACAGCGACGCCACCTACAGGACTGAGGTGATAAAACCGAACTGGCTGGGCTACCTTGGACCCCTGTTGATGGCTGAGGAGGGAGACACATTGATTGTCCACCTGAAGAACATGGCTACCAGACCTTACAGCATCCACCCGCATGGATTGAACTATAGCAAGGGCAATGAGGGAGCCCTATATCCAGATGGTACTGGTCCAGAGCTGAAGCGTGACGACTCAGTGCCTACTGGTACAACAGTGACCTATGAGTGGACCCTCCCAGAGAGCCACAGCCCAGCATCAGATGACAGCAACTGCTTGACCAGATTCTACCACTCCCACGTGAGCCCACCAAAAGACATCGCTGCAGGACTGATAGGACCCCTCATCACCTGTAAGACAGGAACTCTGGACTTGCATGGAGACAGGTCAGGAGACTATCTGTACGCTCTGCTCTTCATGGTGTCAGATGAGAACTTCAGCTGGTACTTGGATGACAACATCAGGACGTACATTAGGGCTCCTGCTGCAGGCCTGAAGGAGGATGAAGATTTCATTGAGAGCAACAAAATGCACGGTATAAACGGTTTTCTGTATGGTAACCTGCCTGGACTGAGCATGTGCCAAGGCAACAAGATCCACTGGCACTTGATTGGCTTAGGCAATGAGGTGGACATGCATTCAGTTCATTTCCATGGCCAGATTCTGACCCTTCAGAaccaccacacagacacagtcagtCTTTTCCCCGCCTCCAGcactacagctgaaatgatggCTGACAATCCTGGAAACTGGCTGCTGACGTGCAACGTTAATGACCATTTCATGGCTGGAATGCAGGCTATATTTGAGATCAAGAAGTGTTTCCCCAACGTCCATAAGCCCCGGCCACACGGTGAGCTCAGACCGTTCTTTATTGCTGCTGAAGAAGAAGTCTGGGACTACGCTCCTACGCCGCCTACTGATGGtgaagCAGACAAGTTTGTAACCAGAGGACCAAACCGTATTGGAAGCCGCTATAAGAAGGTCCGCTATGTGGAATACACTGACATCACCTTCACAACAAAGATGCTACGCAGCCCAGAGGAGGAACACCTTGGAATTCTGGGTCCTGTGCTGCGAGCTGAAGAGAAAGACACCATCAAGGTGGTGTTTAAGAACAAAGCCAGCCGGCCTTATAGTATACAACCCCATGGTGTTCAGTACAGTATTGAACAGGATGGGACGCTCTATCACAATGAACTAGAAGAGACCCATACAGCGAAGAAACTGCGTGAGCTAAAGAAGGAACCAAGAGTGGTGACCCCTCCCCCAGCTGCTCTGGTCAGACCTGGGACGATGCACACCTATGAGTGGACGGTGCCAGTGGGTGCTGGTCCAGTAGAAGGGGAGGCTGACTGTCTGTCCTATCTGTACTACTCTGGAGTGGACCCTGTTAAAGACACCAACTCTGGACTGGTTGGACCGCTCCTTATCTGTCGACCTCGATCACTTAAAAAAGGACAACAGAAAAACTACGACAAAGAGTTCCACCTCATGGCCACAATATTTGATGAGAACCTGAGCTGGTATCTGGACGACAACATTAAGTCCCTAAGCACTGTTCCCTCTGCTGTTAACAAGGAAGATGAGGGCTTTATAGAAAGCAACAAGATGCATGCCATCAATGGCTTTGTGTATAGGAACCTCCCAGGCCTGACCATGTGTAAGGGGGATAAAGTATCGTGGCACGTGTCAGGACTGGGTTCAGAGACGGACATCATCAGCCTTTACTTTGAGGGAAACCGCTTCATCTACCGCCAGAACAGACGAGACACCATTAACGTCTTCCCTCACATCTCACACACTGTCACTATGGAGCCAGACAGCATGGgtcaGTTTGAAGTGGTGTCAGCCACAGTGAACCATTATCAGGGTGGGATGAGAGCCAACTACACGGTAAAGAAATGCAGCATGCTTCAGCGTCAGGGTGAGATTATGCTTCACTCAAAAACCTATTACATCGCTGCCATGGAAATGGACTGGGACTACTCTCCAAACCGCACTTGGGAGGCTGAGATGTTCCGCGGTCAGGAGAAccctGCTCATGTCTTCCTGGACCAGCAGGGTGGGTTTATAGGCTCCCGTTACAAGAAGGTGCTCTACCGCCAGTTCACCAATAACAAGTTCACCAAGCAGGTGGAAAGAACAGCCGATATGGAACACCTCGGCATTATGGGTCCAATGATTCATGCTGATGTGGGAGACAAGGTGACAGTGGTTTTTAAAAACATGGCATCCAGGCCTTATTCTATCCACGCACATGGAGTCAAGACAGAAAACCCAGATGTTCATCTCACCCAACCAGGTGAGACTCACTCCTACTACTGGTACGTTAATAAGAATACAGGACCAACCCCAGAGCAGGAAGAGTGCTCTGTGTCAGCGTACTACTCCACTGCTGATGTTACCAAGGACCTGTACAGCGGTCTGATTGGTCCGTTGGTGATCTGTCGTCGTAGTTGGGGCAGGACTCTTGGTATGAAGAAGGAAGTAGAAGAGTTTGCGCTGCTTTTCCTGGTTTTTGATGAGAATGAAAGCTGgTATCTGGATGAAAATATCAGGACCTACATCAGGAACCCTCGCACAAACTTGAAGGATGATGAAACTTTTATAGAGAGCAACAAAATGCACTCCATTAATGGTTATGTGTATGGCAATCTGAATAGTTTGAATATGGAGGTGGGTGATAAGGTGTACTGGTACCTGATGGGAATGGGCAATGATGTGGAcatacacactgcacactggcatgGACACAGTGTGGAATACAAGCTGGGCGGAGGTCCTCATCGAACTGATGTGTATGAGCTGTTTCCAGCTACCTTCCAGACAGTAAAGATGCGCGCTACGTATCCTGGTACCTGGCTGCTCCACTGTCACGTCATTGACCACATTAAAGCTGGCATGGAGACGACGTATACTGTTACTGAGAAAGAAAAGAAGAAGGGATTATTTGGCTGAACAGTTGAGAAAACTCCAGAAAGACAACAGCGGAGAAATTGAATTTTAGTACCTAATTCACTAAACGTTGTTTGTAAAATCTGCTAAATATGATAAGTTACTAAGATAATTACAGCTCAGAATAAAACACAACCACCCAAGAGCCATGTAATATAAAAATCTGCATTTGAAACTGTCtaactgcttttatattttcCAAATGACACTGAAGAATGTAAGAATACAAATTTAACAGTTTTATAATGACAGCAGGCAGGCAGCAGGGGGCTCTGTAGCCTGACAGGACATTGTCACTGCATAATAAATAATTTGTCACACTAGTGAACATT

Function

NR:

description
PREDICTED: ceruloplasmin-like

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0005507 copper ion binding molecular_function
GO:0016491 oxidoreductase activity molecular_function

KEGG:

id description
K13624 CP; ceruloplasmin

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039812278.1 True 3551 mRNA 0.48 24 10748929 10759929

Neighbor

gene id symbol gene type direction distance location
LOC120566058 LOC103374891,LOC102305063,LOC100702684,LOC101467020 coding upstream 14968 10722902 ~ 10733961 (+)
tm4sf18 LOC100702951,LOC102305373,LOC101466751,LOC102228636,LOC103155263,LOC104936000,LOC103374892,LOC105936905 coding upstream 34047 10696023 ~ 10714882 (+)
LOC120565966 LOC101466472,LOC102777579,LOC108238401,LOC101066382,LOC106527066 coding upstream 57843 10681539 ~ 10691086 (+)
slc25a24 slc25a24,LOC104951356,LOC104935995 coding upstream 80043 10653639 ~ 10668886 (+)
henmt1 NA coding upstream 121890 10617375 ~ 10627039 (+)
LOC120565506 NA coding downstream 345212 11105141 ~ 11107198 (+)
ccdc17 NA coding downstream 462593 11222522 ~ 11237901 (+)
LOC120565497 LOC103370597 coding downstream 488505 11248434 ~ 11304093 (+)
trnam-cau_8 NA coding downstream 488646 11248575 ~ 11248647 (+)
LOC120566075 LOC101470345,LOC102300495,LOC102205443,LOC103370586 coding downstream 551809 11311738 ~ 11356871 (+)
G94587 NA non-coding upstream 37433 10711203 ~ 10711496 (+)
G94515 NA non-coding upstream 217548 10530696 ~ 10531381 (+)
G94450 NA non-coding upstream 239391 10507652 ~ 10509538 (+)
G94426 NA non-coding upstream 343696 10339236 ~ 10405233 (+)
G94604 NA non-coding downstream 188574 10948503 ~ 10948822 (+)
G94609 NA non-coding downstream 203619 10963548 ~ 10977065 (+)
G94613 NA non-coding downstream 236548 10996477 ~ 10997201 (+)
G94674 NA non-coding downstream 341399 11101328 ~ 11101569 (+)
G94676 NA non-coding downstream 342547 11102476 ~ 11102815 (+)
atp11b atp11b other upstream 334103 10363462 ~ 10414826 (+)
LOC120565490 NA other upstream 589048 9985719 ~ 10159881 (+)
ttc14 ttc14 other upstream 800692 9933613 ~ 9948237 (+)
G94376 NA other upstream 845740 9902285 ~ 9903189 (+)
LOC120565620 NA other upstream 902654 9844271 ~ 9846275 (+)
G94598 NA other downstream 156996 10916925 ~ 10941244 (+)
si:ch211-162e15.3 LOC103376230,LOC100712485,LOC108238459,LOC102795316,LOC102207055 other downstream 187003 10946932 ~ 10948316 (+)
LOC120565923 LOC103370579,LOC100695501,LOC102794561,LOC101470646,LOC102226407,LOC102291616 other downstream 599761 11359690 ~ 11458146 (+)
znhit6 znhit6,LOC102790327 other downstream 1029206 11789135 ~ 11821882 (+)
lrp8 LOC103355569 other downstream 1401709 12161638 ~ 12443080 (+)

Expression


Co-expression Network