sele


Basic Information

Item Value
gene id sele
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 24515434 ~ 24519540 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039812307.1
CAGGAAAAGTGGAGCAGGCTGATATAAAAGCAGCACACTCAGCACATGCAACTCTCAGAATCCTCTCTTCCTCAGATGTGTTGAGACCAAAGAAATACTAAGAGTCTTCAGTAGGTTATCACACATACAACTTAAAATGAAGTTCTGCTTTGGATTACTTCAGACCCGTGGATTTAAGTCCTCATGGATCAGCTTGACCTTTCTTTGCTCAATGCTGTGCATGTGGACTAGTGTAGAGAGCTGGTCCTACTACTACTCTAACACCACCATGAATTGGCCGGAAGCTAGAACCTGGTGCCAGAAGCACTACACAGACATGGTGGCCATCCAGAACCAGGAGGAGATCGGGCATCTCAACAGCTGGCTGCCCAGGAAATCCACTTACTACTGGATCGGGATCCGCAAGGTCAATAATGTCTGGACCTGGGTAGGAACCAACAAGGCTCTGACAGCAGAAGCAACCAACTGGGCTCTGGGCGAACCAAACAATGGCAAACGGAAACAGAGAGTGAGGACGAATGAGGACTGTGTGGAGATGTACATTAAAAGCGATAAGCATCCAGGCAAATGGAATGATGAGAGGTGCGAGAAGTTGAAGACCGCTCTGTGCTACGCAGCTGCCTGTAAGAACAACTCATGCCGCTATGGAGACTGTGTCGAAACCATCAACAGCCACAAGTGTGCTTGCTTTGAAGGCTTTTATGGAGAGGAGTGTGAGCACGTTGTCAAGTGTAACAAAGAGCAGGTGACCGTTCCATATAAAGGAAGTGTGAATTGCATTCACAAGCATGGAAACTTCTCCTACGACTCCTTGTGCCAGTATTCCTGCGAGGAAGGATACAAGCTGAGTATGTCAAGACCCATGAAATGCACTGCCTCGACACAGTGGTCAGAGCGGCCACCTACATGTGAATTGGTCCAGTGTCAGGAGCTGTCTAGTCCAACAAGAGGATCCATGAAGTGCTCCGATCCTCTGGGCccctccagctaccagtccacctgtgtgtttacctgtgatGAAGGCTATGTACTCGCTGATTCCCCGTCTGACACTCTGCAATGTAAAGCGTCAGGATTTTGGAATGCCTCCCAGCCGCTTTGTGTTGCTGTCCAGTGCCCTGCTCTCCCCGAGCTAGACAATGGCACTGTCAGCTGTGGAGACGATGCAGATGTGAGGTTTAGCTACGGAAACACCTGCAGCGTCAGCTGTGCTCCCGGCTACCACCTGGTGGGACCAAGCAGGGTGACATGCACATCAGCAGCTGAGTGGAGTGAGAGTATGCCTCGCTGTGAAGCCATCACATGCCAGAATCCAGAGGGAGAAGCTCACCTCATCACCCAGTGCAGCCGACCTTCGACCGAACTGCGGCCAGACTCCACCTGCAGCTTCAGCTGTGAAGCAGGCTTTGAACTGCAGGGAGCGCACACCACTCAGTGTTCTGAGGACGGACAGTGGAGTAAAGCCATACCTACCTGCAAAGcaATAGGATGTCCTGCTCCTGAGATCCCAACAAATGCCCAGATCAGCTGCATCCCTTCTCTGTCTTCACTTGTTTCTACCGTGACCCCCAATCCACTTGGTATGGTCTGCATTTTCAGCTGTGATGAAGGCCATGAGCTGCAAGGTGCCCTAAGCATGGAGTGTGCAAATCCAGGCCAGTGGACCTCCACCCCACCAAACTGCTCAGCGGTGAGATGCCCATTGCTCGAGGCTCCTGAAAACGGTCATATCAACTGCTCAAACAGGGAGTCAGTGTACAACTCACAGTGCTCCTTCACATGCAAACAAGATTACTCTTTAGACGGCCACGAGCTGCTGATCTGTGATCGTCATGGCAATTGGACTGGAGAGAAACCCTCCTGCCAAGCTCCCCCATCTCCGATTACTGCCATTGCTTCTGTAGCGGCAACAGGGGGCGCTGTTTTATTATCTGGTGTGTCTCTGGCTATGTGGATCCTGAAACGACTGAAGCAGAAAGCAAACAAGTTTGAGCTAAACAGCAACTCTGACATCGAGGCCCCTCCACAGGTCTACAAAAACAGCATTGACAGCCTCATCTAGTCATATTCTTCAGAGACAGCAAAGGATAATTATATATATCTCTAACATAACTGTATGCCAGTCACTCGTCATAGTAATGTGAACAATAtgaatactttacattgtataaCACTTGTTAACAGGAAAACTCAATATGTCAGAGCTATCTATGGTGAGGGGAGAGTTTTTTCAGACCTTTGCATTTGATTGCTGCATTACGTTTTGTTGAATTTCATGATTTTCTTTGTAATGTTATTCAGACATGTATTTCCTCCCAATGGGAGTTTTATATTGAGCACATTGTTCTACAGCTTTATGAACATGCTGGAAAGGGGGCTCGAATCATgttgttgtaatgtaatgttatatAATGTCGTAGGTGGATTGCCATGTCATTGCAGAACTGTGAATCATTTCAGTATTTATGTACTATTTATTTAACAGATGGTTATTGCATTTGAAATGCTCATTCATATTTCTGTATGTTTAAAGCACTGCTGcttttaattcataataaaacttcaaaatataa

Function

GO: NA

KEGG:

id description
K06494 SELE, CD62E; selectin, endothelial cell

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039812307.1 True 2573 mRNA 0.47 12 24515434 24519540

Neighbor

gene id symbol gene type direction distance location
scyl3 scyl3 coding upstream 26683 24481703 ~ 24488751 (+)
foxd2 LOC104918470,LOC103372816,LOC100707784 coding upstream 226745 24287104 ~ 24288689 (+)
foxe3 foxe3,LOC104952243,LOC102794361 coding upstream 234370 24278396 ~ 24281064 (+)
ankrd24 ankrd24,LOC106918341,LOC106947862,LOC102780339,LOC103142601 coding upstream 332406 24168358 ~ 24183028 (+)
s1pr3a LOC104942240,LOC103398206 coding upstream 377920 24133664 ~ 24137514 (+)
LOC120565835 NA coding downstream 1094 24520634 ~ 24524358 (+)
LOC120566076 NA coding downstream 4933 24524473 ~ 24531588 (+)
atf6 NA coding downstream 70786 24590326 ~ 24627700 (+)
LOC120565979 NA coding downstream 127330 24646870 ~ 24652453 (+)
fyco1a LOC103365712 coding downstream 148842 24668382 ~ 24684071 (+)
G97896 LOC104918463,LOC104952282 non-coding upstream 2401 24511971 ~ 24513033 (+)
LOC120565067 NA non-coding upstream 150259 24309609 ~ 24365175 (+)
G97807 sac3d1 non-coding upstream 259353 24254470 ~ 24256081 (+)
G97789 NA non-coding upstream 301575 24211860 ~ 24213859 (+)
G97788 odf3l2,LOC104949085 non-coding upstream 306144 24208229 ~ 24209290 (+)
G97938 NA non-coding downstream 118926 24638466 ~ 24642085 (+)
G98014 LOC106904844,LOC106963772,LOC102314236,LOC103463589,LOC106513892,LOC102207185,LOC100706092 non-coding downstream 265256 24784796 ~ 24785342 (+)
G98015 NA non-coding downstream 267791 24787331 ~ 24787540 (+)
G98019 mknk1 non-coding downstream 313897 24833437 ~ 24835517 (+)
G98021 NA non-coding downstream 318073 24837613 ~ 24875666 (+)
cks2 LOC104918474,LOC108230759,LOC102216377,LOC104949087,LOC105011584 other upstream 307293 24204341 ~ 24208141 (+)
cdc34a cdc34,LOC103368917,LOC104923648,LOC103397164,LOC107393183,LOC103156874 other upstream 864921 23631119 ~ 23650513 (+)
G97596 lpl,LOC108280930,LOC105906969 other upstream 1037616 23474782 ~ 23477818 (+)
LOC120565078 LOC104955513,LOC104923635,LOC103365215,LOC100690174 other upstream 1135059 23378731 ~ 23380375 (+)
pole4 NA other upstream 1191950 23321464 ~ 23323484 (+)
LOC120565649 LOC103373964,LOC107081966 other downstream 229477 24749017 ~ 24765225 (+)
G98012 dmbx1,LOC103373966,LOC108230579 other downstream 262378 24781918 ~ 24783881 (+)
elovl1b LOC106963699,LOC101078639 other downstream 332747 24852287 ~ 24873916 (+)
G98194 NA other downstream 1013285 25532825 ~ 25547089 (+)
slc35a3a slc35a3,LOC101471768,LOC102790943,LOC100705874,LOC108230529,LOC103354215,LOC106515047 other downstream 1210685 25730225 ~ 25738789 (+)

Expression


Co-expression Network