LOC120566074 (LOC104935955,LOC103367504)


Basic Information

Item Value
gene id LOC120566074
gene name LOC104935955,LOC103367504
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 9067178 ~ 9070676 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039812315.1
ATGTCTTCAACAGGCTTCCATTTTCAGTTTCAGGGGCTATCAAAACACACAGTGTGCAAAGGTCACAATTTGCCTATCACAGTAAACTGTTACTGTCATTTGCATCTGTGCTGCCACACTAAAAATAATGTGAACACAGCATGCTTTCAGCCTGTCTGTTTGGCTTATCCAGTCAGGAGGAGGCAAGGATCTGCAATAgcagaagggggaaaaaaaagcagagagaCATAATAGGGAGTAAGGCATCAAAAGGGGGGAGGCATACATGCAGTACAGTGTGAGTATGTGTTGTTTCTAACAGCGAGGTAGGTGGAGAGGAGgaacaggagaaggaggaggaaggggtgCTTCCTCTTCAGGCTGAGCTGAGCTGCTGATGTATCCCAGCAGCCCTGGTCAATAGCAACAGGAAACCTTAGTATAAAACTCCGCGTCGTGGGGGGAACCCTCCTAAGTATCTCTCAGCCGCAGCATGACCAGGACCGAGAGCCTGAGAGTGTGGACTTAATAAGACAATGCCCAGCCTAATCGTCGAACCACTCAACACACAGCACTTCATCATGGACCAAGATGACAGGAAGAGAAACAAGAACATTGGAAAGAACTTCATGTGCCGTCTCCAGTGCATGTTCTCACACTCGTCGAGCTCTGAGAGCAGGCTAAGTTTAGAAGATACCCAACAATGGTCACAGTCACTGGAAAGGCTTCTCGAGTCTAAATATGGAATGGCCACTTTTCGCAACTTTCTCAAATCCGAATACAGCGATGAGAATATTGAGTTCTGGCTCACCTGTGAGGACTACAAGAAGATCAAGTCTTCATTCAGAATGTCTTCAAGAGCCAAGAAGATTTATGAGCAGTTCATCAAAGCAGAATCTCCTAAAGAGATCAACATCGACTATCACACCCGAGAGCAGATCAAAAGGAACGTCAAGACTCCCACCATACACTGCTTTGACGACGCTCAGAAGATAGTTTACGGGCTGATGGAAAGAGACTCGTACCCGCGGTTCCTCCGCTCGGACATTTATAGAACTCTCCTGGAAAACCTTGCCGCCGAAGCCACGAAGGGATGAAAGCACgctcagggagagagagagagagagagagagagagagagagagaaaaagaacataaaaccCTTAACTGGAATGTTTGAGCTCCTTCAGGAGGAaggaccgacaacaaagaaggaaggagggtCGACCCAGCGCGCTACACGGACACATACAGAGGCCTCGCACCTCCGCCGTTGTCACTCCAGAAGCTAATTGTGCCTTAGTCCCGTCATGGGAGGATCCCAACACTGAGCATGTCACACCTTAAGGACTGTGTGAGAAGAAGACAAAATAAACACGACCCtttagtgtgtgtttgcactGGATAAGTCTATATACGCGGGAGAATGAGCCACTTTTTGACAATGAATGAATCAGTGAGGTGACTGACGCCCGCTCTGACTGTGGAGCTGCGTAAGCAAACTATGCAGCAGACCTCCTTTGGCCTTCTTTGCAGaagtgtttcctgtttcctgtgcaGATTGAGATAGAGGATGTAAGATACAACGGTCACACTCGATTAGTTGCGTGTGTCTGGGttcgcgcatgtgtgtgtgtgtgtgtctgagagagtGCAAGTGAGTATTTAGTTGTAGCTTTTAACTGCCATTGAGACAGGGTAGGCTGTCCCAAAAAGAGTTGGACAATTATCTAATGACAGCACTAAGGCAGACAACAAATCCATAGTGGACAGAGGACTTAATAGCGATATGTCATCCTTAGTAAAGGGTTGCAGAAGGCCGCTTGGTTCTGCAAGAGGCATTCTGGGACACTTTAAAAGGagatttttctccttttttatgATTGgaccgttgttgtttttttcttttgttttttttggttttaaacTGATGTAGATTTAAACTTCTATGGGTGACATTTTGTGCCACTATTCAATATCTTTATCCTtctcaaagaaaaaaatagtagcagtttattttatttcaatagAAATATGgattacatttctttctttttttttaactaaaaacaTAATCTTGCACATTTTTTTGCGTGGAATCTGAACCAGAAGTTCCCTGTTTACGGCCAGTGGATTCTAATTGAATTCCTCAGCACAAGACTACTGGCCGTTAACTTAGTCAAAACCAAATTCTTACAGCACTGAAGTGTCAAGAGTTGTGATTTAATGTATTTAACTATATGAGTGGAATTATTATAGAGATAGGATGTTTCACGTTGCATGATAGGATGGTAAAACTCCTTGTATAGCTTGAGAATATGCCTTATTACTGCTTTCCAAAGAAATGTTGTTTGAATGTATTCTTTGGGGTTTATAGTTAAGTTAACTTAAAAGTTAGACAGTgtattatttattgttatttgtcaCCATTTGAGTACAACATTTGTTGCAGTGTTGAAGTGCTTGTTAAAATGTTAGTGATTTGAATGACATTAAATTATTGTATTAATAATTGC
>XM_039812316.1
CCATATGTCTTCAACAGGCTTCCATTTTCAGTTTCAGGGGCTATCAAAACACACAGTGTGCAAAGGTCACAATTTGCCTATCACAGTAAACTGTTACTGTCATTTGCATCTGTGCTGCCACACTAAAAATAATGTGAACACAGCATGCTTTCAGCCTGTCTGTTTGGCTTATCCAGTCAGGAGGAGGCAAGGATCTGCAATAgcagaagggggaaaaaaaagcagagagaCATAATAGGGAGTAAGGCATCAAAAGGGGGGAGGCATACATGCAGTACAGTGTGAGTATGTGTTGTTTCTAACAGCGAGGTAGGTGGAGAGGAGgaacaggagaaggaggaggaaggggtgCTTCCTCTTCAGGCTGAGCTGAGCTGCTGATGTATCCCAGCAGCCCTGGTCAATAGCAACAGGAAACCTTAGTATAAAACTCCGCGTCGTGGGGGGAACCCTCCTAAGTATCTCTCAGCCGCAGCATGACCAGGACCGAGAGCCTGAGAGTGTGGACTTAATAAGACAATGCCCAGCCTAATCGTCGAACCACTCAACACACAGCACTTCATCATGGACCAAGATGACAGGAAGAGAAACAAGAACATTGGAAAGAACTTCATGTGCCGTCTCCAGTGCATGTTCTCACACTCGTCGAGCTCTGAGAGGCTAAGTTTAGAAGATACCCAACAATGGTCACAGTCACTGGAAAGGCTTCTCGAGTCTAAATATGGAATGGCCACTTTTCGCAACTTTCTCAAATCCGAATACAGCGATGAGAATATTGAGTTCTGGCTCACCTGTGAGGACTACAAGAAGATCAAGTCTTCATTCAGAATGTCTTCAAGAGCCAAGAAGATTTATGAGCAGTTCATCAAAGCAGAATCTCCTAAAGAGATCAACATCGACTATCACACCCGAGAGCAGATCAAAAGGAACGTCAAGACTCCCACCATACACTGCTTTGACGACGCTCAGAAGATAGTTTACGGGCTGATGGAAAGAGACTCGTACCCGCGGTTCCTCCGCTCGGACATTTATAGAACTCTCCTGGAAAACCTTGCCGCCGAAGCCACGAAGGGATGAAAGCACgctcagggagagagagagagagagagagagagagagagagagaaaaagaacataaaaccCTTAACTGGAATGTTTGAGCTCCTTCAGGAGGAaggaccgacaacaaagaaggaaggagggtCGACCCAGCGCGCTACACGGACACATACAGAGGCCTCGCACCTCCGCCGTTGTCACTCCAGAAGCTAATTGTGCCTTAGTCCCGTCATGGGAGGATCCCAACACTGAGCATGTCACACCTTAAGGACTGTGTGAGAAGAAGACAAAATAAACACGACCCtttagtgtgtgtttgcactGGATAAGTCTATATACGCGGGAGAATGAGCCACTTTTTGACAATGAATGAATCAGTGAGGTGACTGACGCCCGCTCTGACTGTGGAGCTGCGTAAGCAAACTATGCAGCAGACCTCCTTTGGCCTTCTTTGCAGaagtgtttcctgtttcctgtgcaGATTGAGATAGAGGATGTAAGATACAACGGTCACACTCGATTAGTTGCGTGTGTCTGGGttcgcgcatgtgtgtgtgtgtgtgtctgagagagtGCAAGTGAGTATTTAGTTGTAGCTTTTAACTGCCATTGAGACAGGGTAGGCTGTCCCAAAAAGAGTTGGACAATTATCTAATGACAGCACTAAGGCAGACAACAAATCCATAGTGGACAGAGGACTTAATAGCGATATGTCATCCTTAGTAAAGGGTTGCAGAAGGCCGCTTGGTTCTGCAAGAGGCATTCTGGGACACTTTAAAAGGagatttttctccttttttatgATTGgaccgttgttgtttttttcttttgttttttttggttttaaacTGATGTAGATTTAAACTTCTATGGGTGACATTTTGTGCCACTATTCAATATCTTTATCCTtctcaaagaaaaaaatagtagcagtttattttatttcaatagAAATATGgattacatttctttctttttttttaactaaaaacaTAATCTTGCACATTTTTTTGCGTGGAATCTGAACCAGAAGTTCCCTGTTTACGGCCAGTGGATTCTAATTGAATTCCTCAGCACAAGACTACTGGCCGTTAACTTAGTCAAAACCAAATTCTTACAGCACTGAAGTGTCAAGAGTTGTGATTTAATGTATTTAACTATATGAGTGGAATTATTATAGAGATAGGATGTTTCACGTTGCATGATAGGATGGTAAAACTCCTTGTATAGCTTGAGAATATGCCTTATTACTGCTTTCCAAAGAAATGTTGTTTGAATGTATTCTTTGGGGTTTATAGTTAAGTTAACTTAAAAGTTAGACAGTgtattatttattgttatttgtcaCCATTTGAGTACAACATTTGTTGCAGTGTTGAAGTGCTTGTTAAAATGTTAGTGATTTGAATGACATTAAATTATTGTATTAATAATTGC

Function

NR:

description
PREDICTED: regulator of G-protein signaling 13-like isoform X2

GO: NA

KEGG:

id description
K16449 RGS; regulator of G-protein signaling

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039812315.1 False 2495 mRNA 0.43 5 9067182 9070676
XM_039812316.1 True 2496 mRNA 0.43 5 9067178 9070676

Neighbor

gene id symbol gene type direction distance location
LOC120564878 NA coding upstream 5142 9057341 ~ 9062036 (+)
LOC120564973 LOC103367494,LOC104965670,LOC104935957 coding upstream 33498 9021517 ~ 9033680 (+)
rgs4 NA coding upstream 852678 8208453 ~ 8214500 (+)
LOC120565295 tsta3,LOC104953080 coding upstream 1193192 7868591 ~ 7873986 (+)
LOC120565646 LOC103354728,LOC102290039,LOC107394705 coding upstream 1199450 7862214 ~ 7867728 (+)
LOC120564889 rgs2,LOC103367537 coding downstream 10183 9080859 ~ 9083857 (+)
LOC120566012 NA coding downstream 336034 9406710 ~ 9505927 (+)
LOC120566014 NA coding downstream 391769 9462445 ~ 9473374 (+)
trnah-gug_12 NA coding downstream 501622 9572298 ~ 9572369 (+)
depdc1a depdc1 coding downstream 504582 9575258 ~ 9587669 (+)
G94169 NA non-coding upstream 65472 9001456 ~ 9001706 (+)
G94167 NA non-coding upstream 66718 9000163 ~ 9000460 (+)
G94153 NA non-coding upstream 413754 8653056 ~ 8653424 (+)
G94151 NA non-coding upstream 451544 8614911 ~ 8615634 (+)
G94075 LOC104926357,LOC103367455,LOC102788643 non-coding upstream 787206 8278804 ~ 8279972 (+)
G94192 uchl5 non-coding downstream 19152 9089828 ~ 9096292 (+)
G94201 NA non-coding downstream 98643 9169319 ~ 9169757 (+)
LOC120566015 NA non-coding downstream 364045 9434721 ~ 9437621 (+)
G94232 NA non-coding downstream 413327 9484003 ~ 9485965 (+)
LOC120566016 NA non-coding downstream 423305 9493981 ~ 9495357 (+)
G94073 rgs5,LOC107393027,LOC104951458,LOC100708109,LOC105932873 other upstream 780742 8237370 ~ 8286436 (+)
LOC120565614 NA other upstream 1161931 7896145 ~ 7905247 (+)
LOC120565294 pycrl other upstream 1177001 7878919 ~ 7890177 (+)
G93938 NA other upstream 1716591 7349810 ~ 7350587 (+)
rhpn1 rhpn1 other upstream 2685580 6354892 ~ 6381598 (+)
G94199 LOC103367571,LOC102312400,LOC100710958,LOC101467655 other downstream 76486 9147162 ~ 9168877 (+)
LOC120566011 NA other downstream 313829 9384505 ~ 9543535 (+)
G94239 NA other downstream 481620 9552296 ~ 9557568 (+)
G94281 NA other downstream 746945 9817621 ~ 9879198 (+)
LOC120565620 NA other downstream 773595 9844271 ~ 9846275 (+)

Expression


Co-expression Network