LOC120566076


Basic Information

Item Value
gene id LOC120566076
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 24524473 ~ 24531588 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039812319.1
tgagccatcgttaaggttatcaatttcagctgtgcttttcctactatgacaagtcaaaatgtctgctgtgaaaaaggcccatAAATAAACCTAAACAGTCCCTGCCTGCCCAGGCTGTGTGCCAGGATAATCAtgtgtgggtctgtgtgtgtgtgtttccagagaGGGTGGTAGAACGGTGCCCTTCCTGAGAGGAAGTTGCAGCAAAAGTGATATGACACAATTCGTCATTGACTCATTCCCTGAAGAACAATTAATACCAGTTTGCCATTGATTGTCTGTCTGCATAGTGGAGTAAATGCAACCACAAGATTGAGCGACTGACCATATAAAATGATGTTTCAAGAATTGGTTGATACTAGACAAAGCCTGCATCGCATGGTGCTGGTAGCTGCATTTATAGTATTCGTCCAAGACCTGAGCAGCGGAGGAGCAGTGCAGGCATGGACCTACAACTACAGCACCGTTCCCAGCCGTAGATGGCCTGATGCCCGCCAGTGGTGCCTGCAGCACTTTACAGACATGGTGCCCATCCGGAACCAGGAGGAGAGTGACTTCATCAATGATCTGCTGCCGTTAAACACAAGATATTACTGGATAGGCATAGTCAAAAAGGATGGCGAGTGGATCTGGCAAGAAACCTCTGAGAAGGTGCCTAAAGAGGCTCAGAATTGGGCACCAGAGGAGCCAGATAACATAATGAATCAGGACTGTGTGGAGATTTACAtaaagagggagaaagacacAGCCAAGTGGAACAACGAGAGCTGTCGGAAGAAGAAGGGAACCATCTGCTATGCTAcCTCTTGCAGACAGGATTCCTGCAGTGCCAATGCAGACTGTGTGGAGACCATTGGGAACTATACCTGCCAGTGCCATCCTGGTTTCCTGGGGTCACGCTGTGAAGAGGcAATCGCATGCAAACCCTTGCTGGATCCAGAACAGGGATCTCACTACTGTTTCCATCCCTATGGGTCCAATCGTTTCAACTCTTCCTGCCGTTTTGACTgtgaacttggctttcagttGGTAGGCGTGCCACAACTGCTTTGCCAAGCCAGCGGACGTTGGAACCACCATGTTCCTCTGTGTCAAGTAAAAAAGTGCTCCCCCGGTTTCTTTCCTGTTACGGGCAATGTGACATGTGTGGACCCTCTGGAGCCTTTCTCCTTTGGCTCACAGTGTAACTTCACCTGCCAAGAAGGCTACTACCTGACCGGAGACAACACATTCACCTGTCTGGCCTCGGGACAATGGAGCAACCCTACACCTACATGCACAGTGGTAAAGTGCAACAGTTTAAAGACTCCACCCAATGCCTTCATGCAATGTCAGGACCCTCGAGGAGTGTACAGCTATGGCTCAATATGTTCCGTGCTATGTGAAGAAGGATTTGATCTGATTGGCACAAACATGACAAAATGTTCTTCTCAGGGAAACTGGAGTCATGCACTTCCTGTTTGCCAGGCTAAGAGGTGTGAACCAATAAAGCCTCATCATGGCTCCCTATCGTGTTATGACCCAAATGGTTCCTTCAGTTTTGGTTCTTGGTGTACTACAACCTGTGATGAGGGCTTTCTACTGAATGGAACAGACAGCACTGAGTGCACCTCCCTGGGCATGTGGAGTGCAGACATACCACATTGTcttgCTAAGAGATGTCCAACTGTGAACTCCTCCTCTCATGGCTACTTGGTGTGCTCTGATCCTCATGGAGAATTCAGTTTTGGTTCTCTGTGTACATCAACCTGTGAGGAGGGTTTTCTCCTGAATGGGACGGCTGACATGCAGTGCACCTCTCTGGGCACATGGAGCACAGACATCCCTCATTGCAACGCTAAAAGATGTCCCGCTTTGGTCGCTCCCTCAAATGGCTCCCTAGTTTGCTCTGATCCTCATGGAGAGTTCAGTTTTGGTTCTCAATGCAAGTCAACATGTGAGGAGGGTTTTCTCCTGAATGGGACAGCTGACACAGAGTGTACCTCTCTGGGCATGTGGAGCACAGACATCCCAGGTTGCTTGGCTAAAAGATGTTCAACCCTGAGCTCTCCCTCTCATGGCTCCCTAGTTTGCTCTGATCCTTATGGCGAGTTCAGTTTTGGTTCTCAGTGCATGTCAACATGTGAGGAGGGCTTTCTCCTGAATGGGACAGCTGACACAGAGTGCACCTCTCTGGGCATGTGGACCTCGGACGTCCCAGGTTGCTTGGCTAAAAGATGTTCGACCCTGAGCTCTCCCTCTCATGGCTCCTTTTTCTGTGTTGATCCTCATGGAGAGTTCAGTTTTGGTTCTTGGTGTAAATCAACATGTGAGGAGGGTTTTCTCCTGAATGGGACAGCTGACACAGAGTGCACCTCTCTGGGCACGTGGAGCACAGACACCCCTCGTTGCTTGGCACAGCCATGCCCCCTACTGGCCAAGGCTCCACAACATGGTAAGATGAACTGCAGCCATCCATACTCTCCTTTCAGCTTTGGCTCCCACTGTGAATTTGAATGTGATGAGGGCTTCCGGCTGAGAGGAACACAGACTATGACATGCAACAACTCAGGCCACTGGAGTCAAGATCTACCCACCTGCCAGCCTGTACAGTGCGAGTCCATTCGTACCTTGTCTTTATCCCTGTCTATGAACTGCTCCCATCCTCTGGGGAACTTTAGCATTGGCTCCCAGTGTCTTTTCACCTGTGAGGAGGGATTCTCCCTGAATGGCACAGATGTGCTGATTTGCTCCTCCACTGGGTTCTGGAATGCCAGCCTGCCTACCTGCACAGGTATGCCAGTGGGGTGGACTGCCATGCTGCTGTCTCCAGGTTTAAGAGCAGTTTATGTTGTCCTGCTGCTTGTCCTGATAGGACTGGCTGTGGTGATTATAATGCGATTTAAGAAAAAAGGAAATACGATCATGGAACCGCATGCACCAGcatggggagacagagagaatcCAGCATTTGATTTTAAGACTTGATTTTTGCAGCAAATCATTTAAAACATACTGCACCCAAACACTTGCTGTTATTATATGAAACTTGGTAGTTGTTGTGGTATGATACTGGTAAGAAAAGAATACAGTAGGATTAGAGCTTCACTGGAACTGATTTAATGCACATTTTGCATGAAAACAGTTACCTTTTTGTTATTAAAGTCATAAAGCAaagtttgtttgctgcttttgcTGTGTCCTGCTTGTGTATTGCTTGATTGTCAATAAACTAGCAACAATTCTTAAA
>XM_039812320.1
caatttcagctgtgcttttcctactatgacaagtcaaaatgtctgctgtgaaaaaggcccatAAATAAACCTAAACAGTCCCTGCCTGCCCAGGCTGTGTGCCAGGATAATCAagaGGGTGGTAGAACGGTGCCCTTCCTGAGAGGAAGTTGCAGCAAAAGTGATATGACACAATTCGTCATTGACTCATTCCCTGAAGAACAATTAATACCAGTTTGCCATTGATTGTCTGTCTGCATAGTGGAGTAAATGCAACCACAAGATTGAGCGACTGACCATATAAAATGATGTTTCAAGAATTGGTTGATACTAGACAAAGCCTGCATCGCATGGTGCTGGTAGCTGCATTTATAGTATTCGTCCAAGACCTGAGCAGCGGAGGAGCAGTGCAGGCATGGACCTACAACTACAGCACCGTTCCCAGCCGTAGATGGCCTGATGCCCGCCAGTGGTGCCTGCAGCACTTTACAGACATGGTGCCCATCCGGAACCAGGAGGAGAGTGACTTCATCAATGATCTGCTGCCGTTAAACACAAGATATTACTGGATAGGCATAGTCAAAAAGGATGGCGAGTGGATCTGGCAAGAAACCTCTGAGAAGGTGCCTAAAGAGGCTCAGAATTGGGCACCAGAGGAGCCAGATAACATAATGAATCAGGACTGTGTGGAGATTTACAtaaagagggagaaagacacAGCCAAGTGGAACAACGAGAGCTGTCGGAAGAAGAAGGGAACCATCTGCTATGCTAcCTCTTGCAGACAGGATTCCTGCAGTGCCAATGCAGACTGTGTGGAGACCATTGGGAACTATACCTGCCAGTGCCATCCTGGTTTCCTGGGGTCACGCTGTGAAGAGGcAATCGCATGCAAACCCTTGCTGGATCCAGAACAGGGATCTCACTACTGTTTCCATCCCTATGGGTCCAATCGTTTCAACTCTTCCTGCCGTTTTGACTgtgaacttggctttcagttGGTAGGCGTGCCACAACTGCTTTGCCAAGCCAGCGGACGTTGGAACCACCATGTTCCTCTGTGTCAAGTAAAAAAGTGCTCCCCCGGTTTCTTTCCTGTTACGGGCAATGTGACATGTGTGGACCCTCTGGAGCCTTTCTCCTTTGGCTCACAGTGTAACTTCACCTGCCAAGAAGGCTACTACCTGACCGGAGACAACACATTCACCTGTCTGGCCTCGGGACAATGGAGCAACCCTACACCTACATGCACAGTGGTAAAGTGCAACAGTTTAAAGACTCCACCCAATGCCTTCATGCAATGTCAGGACCCTCGAGGAGTGTACAGCTATGGCTCAATATGTTCCGTGCTATGTGAAGAAGGATTTGATCTGATTGGCACAAACATGACAAAATGTTCTTCTCAGGGAAACTGGAGTCATGCACTTCCTGTTTGCCAGGCTAAGAGGTGTGAACCAATAAAGCCTCATCATGGCTCCCTATCGTGTTATGACCCAAATGGTTCCTTCAGTTTTGGTTCTTGGTGTACTACAACCTGTGATGAGGGCTTTCTACTGAATGGAACAGACAGCACTGAGTGCACCTCCCTGGGCATGTGGAGTGCAGACATACCACATTGTcttgCTAAGAGATGTCCAACTGTGAACTCCTCCTCTCATGGCTACTTGGTGTGCTCTGATCCTCATGGAGAATTCAGTTTTGGTTCTCTGTGTACATCAACCTGTGAGGAGGGTTTTCTCCTGAATGGGACGGCTGACATGCAGTGCACCTCTCTGGGCACATGGAGCACAGACATCCCTCATTGCAACGCTAAAAGATGTCCCGCTTTGGTCGCTCCCTCAAATGGCTCCCTAGTTTGCTCTGATCCTCATGGAGAGTTCAGTTTTGGTTCTCAATGCAAGTCAACATGTGAGGAGGGTTTTCTCCTGAATGGGACAGCTGACACAGAGTGTACCTCTCTGGGCATGTGGAGCACAGACATCCCAGGTTGCTTGGCTAAAAGATGTTCAACCCTGAGCTCTCCCTCTCATGGCTCCCTAGTTTGCTCTGATCCTTATGGCGAGTTCAGTTTTGGTTCTCAGTGCATGTCAACATGTGAGGAGGGCTTTCTCCTGAATGGGACAGCTGACACAGAGTGCACCTCTCTGGGCATGTGGACCTCGGACGTCCCAGGTTGCTTGGCTAAAAGATGTTCGACCCTGAGCTCTCCCTCTCATGGCTCCTTTTTCTGTGTTGATCCTCATGGAGAGTTCAGTTTTGGTTCTTGGTGTAAATCAACATGTGAGGAGGGTTTTCTCCTGAATGGGACAGCTGACACAGAGTGCACCTCTCTGGGCACGTGGAGCACAGACACCCCTCGTTGCTTGGCACAGCCATGCCCCCTACTGGCCAAGGCTCCACAACATGGTAAGATGAACTGCAGCCATCCATACTCTCCTTTCAGCTTTGGCTCCCACTGTGAATTTGAATGTGATGAGGGCTTCCGGCTGAGAGGAACACAGACTATGACATGCAACAACTCAGGCCACTGGAGTCAAGATCTACCCACCTGCCAGCCTGTACAGTGCGAGTCCATTCGTACCTTGTCTTTATCCCTGTCTATGAACTGCTCCCATCCTCTGGGGAACTTTAGCATTGGCTCCCAGTGTCTTTTCACCTGTGAGGAGGGATTCTCCCTGAATGGCACAGATGTGCTGATTTGCTCCTCCACTGGGTTCTGGAATGCCAGCCTGCCTACCTGCACAGGTATGCCAGTGGGGTGGACTGCCATGCTGCTGTCTCCAGGTTTAAGAGCAGTTTATGTTGTCCTGCTGCTTGTCCTGATAGGACTGGCTGTGGTGATTATAATGCGATTTAAGAAAAAAGGAAATACGATCATGGAACCGCATGCACCAGcatggggagacagagagaatcCAGCATTTGATTTTAAGACTTGATTTTTGCAGCAAATCATTTAAAACATACTGCACCCAAACACTTGCTGTTATTATATGAAACTTGGTAGTTGTTGTGGTATGATACTGGTAAGAAAAGAATACAGTAGGATTAGAGCTTCACTGGAACTGATTTAATGCACATTTTGCATGAAAACAGTTACCTTTTTGTTATTAAAGTCATAAAGCAaagtttgtttgctgcttttgcTGTGTCCTGCTTGTGTATTGCTTGATTGTCAATAAACTAGCAACAATTCTTAAA
>XM_039812321.1
tgagccatcgttaaggttatcaatttcagctgtgcttttcctactatgacaagtcaaaatgtctgctgtgaaaaaggcccatAAATAAACCTAAACAGTCCCTGCCTGCCCAGGCTGTGTGCCAGGATAATCAtgtgtgggtctgtgtgtgtgtgtttccagagaGGGTGGTAGAACGGTGCCCTTCCTGAGAGGAAGTTGCAGCAAAAGTGATATGACACAATTCGTCATTGACTCATTCCCTGAAGAACAATTAATACCAGTTTGCCATTGATTGTCTGTCTGCATAGTGGAGTAAATGCAACCACAAGATTGAGCGACTGACCATATAAAATGATGTTTCAAGAATTGGTTGATACTAGACAAAGCCTGCATCGCATGGTGCTGGTAGCTGCATTTATAGTATTCGTCCAAGACCTGAGCAGCGGAGGAGCAGTGCAGGCATGGACCTACAACTACAGCACCGTTCCCAGCCGTAGATGGCCTGATGCCCGCCAGTGGTGCCTGCAGCACTTTACAGACATGGTGCCCATCCGGAACCAGGAGGAGAGTGACTTCATCAATGATCTGCTGCCGTTAAACACAAGATATTACTGGATAGGCATAGTCAAAAAGGATGGCGAGTGGATCTGGCAAGAAACCTCTGAGAAGGTGCCTAAAGAGGCTCAGAATTGGGCACCAGAGGAGCCAGATAACATAATGAATCAGGACTGTGTGGAGATTTACAtaaagagggagaaagacacAGCCAAGTGGAACAACGAGAGCTGTCGGAAGAAGAAGGGAACCATCTGCTATGCTAcCTCTTGCAGACAGGATTCCTGCAGTGCCAATGCAGACTGTGTGGAGACCATTGGGAACTATACCTGCCAGTGCCATCCTGGTTTCCTGGGGTCACGCTGTGAAGAGGcAATCGCATGCAAACCCTTGCTGGATCCAGAACAGGGATCTCACTACTGTTTCCATCCCTATGGGTCCAATCGTTTCAACTCTTCCTGCCGTTTTGACTgtgaacttggctttcagttGGTAGGCGTGCCACAACTGCTTTGCCAAGCCAGCGGACGTTGGAACCACCATGTTCCTCTGTGTCAAGTAAAAAAGTGCTCCCCCGGTTTCTTTCCTGTTACGGGCAATGTGACATGTGTGGACCCTCTGGAGCCTTTCTCCTTTGGCTCACAGTGTAACTTCACCTGCCAAGAAGGCTACTACCTGACCGGAGACAACACATTCACCTGTCTGGCCTCGGGACAATGGAGCAACCCTACACCTACATGCACAGTGGTAAAGTGCAACAGTTTAAAGACTCCACCCAATGCCTTCATGCAATGTCAGGACCCTCGAGGAGTGTACAGCTATGGCTCAATATGTTCCGTGCTATGTGAAGAAGGATTTGATCTGATTGGCACAAACATGACAAAATGTTCTTCTCAGGGAAACTGGAGTCATGCACTTCCTGTTTGCCAGGCTAAGAGGTGTGAACCAATAAAGCCTCATCATGGCTCCCTATCGTGTTATGACCCAAATGGTTCCTTCAGTTTTGGTTCTTGGTGTACTACAACCTGTGATGAGGGCTTTCTACTGAATGGAACAGACAGCACTGAGTGCACCTCCCTGGGCATGTGGAGTGCAGACATACCACATTGTcttgCTAAGAGATGTCCAACTGTGAACTCCTCCTCTCATGGCTACTTGGTGTGCTCTGATCCTCATGGAGAATTCAGTTTTGGTTCTCTGTGTACATCAACCTGTGAGGAGGGTTTTCTCCTGAATGGGACGGCTGACATGCAGTGCACCTCTCTGGGCACATGGAGCACAGACATCCCTCATTGCAACGCTAAAAGATGTCCCGCTTTGGTCGCTCCCTCAAATGGCTCCCTAGTTTGCTCTGATCCTCATGGAGAGTTCAGTTTTGGTTCTCAATGCAAGTCAACATGTGAGGAGGGTTTTCTCCTGAATGGGACAGCTGACACAGAGTGTACCTCTCTGGGCATGTGGAGCACAGACATCCCAGGTTGCTTGGCTAAAAGATGTTCGACCCTGAGCTCTCCCTCTCATGGCTCCTTTTTCTGTGTTGATCCTCATGGAGAGTTCAGTTTTGGTTCTTGGTGTAAATCAACATGTGAGGAGGGTTTTCTCCTGAATGGGACAGCTGACACAGAGTGCACCTCTCTGGGCACGTGGAGCACAGACACCCCTCGTTGCTTGGCACAGCCATGCCCCCTACTGGCCAAGGCTCCACAACATGGTAAGATGAACTGCAGCCATCCATACTCTCCTTTCAGCTTTGGCTCCCACTGTGAATTTGAATGTGATGAGGGCTTCCGGCTGAGAGGAACACAGACTATGACATGCAACAACTCAGGCCACTGGAGTCAAGATCTACCCACCTGCCAGCCTGTACAGTGCGAGTCCATTCGTACCTTGTCTTTATCCCTGTCTATGAACTGCTCCCATCCTCTGGGGAACTTTAGCATTGGCTCCCAGTGTCTTTTCACCTGTGAGGAGGGATTCTCCCTGAATGGCACAGATGTGCTGATTTGCTCCTCCACTGGGTTCTGGAATGCCAGCCTGCCTACCTGCACAGGTATGCCAGTGGGGTGGACTGCCATGCTGCTGTCTCCAGGTTTAAGAGCAGTTTATGTTGTCCTGCTGCTTGTCCTGATAGGACTGGCTGTGGTGATTATAATGCGATTTAAGAAAAAAGGAAATACGATCATGGAACCGCATGCACCAGcatggggagacagagagaatcCAGCATTTGATTTTAAGACTTGATTTTTGCAGCAAATCATTTAAAACATACTGCACCCAAACACTTGCTGTTATTATATGAAACTTGGTAGTTGTTGTGGTATGATACTGGTAAGAAAAGAATACAGTAGGATTAGAGCTTCACTGGAACTGATTTAATGCACATTTTGCATGAAAACAGTTACCTTTTTGTTATTAAAGTCATAAAGCAaagtttgtttgctgcttttgcTGTGTCCTGCTTGTGTATTGCTTGATTGTCAATAAACTAGCAACAATTCTTAAA

Function

GO: NA

KEGG:

id description
K06496 SELP, CD62P; selectin, platelet

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039812319.1 True 3229 mRNA 0.48 17 24524473 24531588
XM_039812320.1 False 3180 mRNA 0.48 17 24524493 24531588
XM_039812321.1 False 3043 mRNA 0.48 16 24524473 24531588

Neighbor

gene id symbol gene type direction distance location
LOC120565835 NA coding upstream 115 24520634 ~ 24524358 (+)
sele NA coding upstream 4933 24515434 ~ 24519540 (+)
scyl3 scyl3 coding upstream 35722 24481703 ~ 24488751 (+)
foxd2 LOC104918470,LOC103372816,LOC100707784 coding upstream 235784 24287104 ~ 24288689 (+)
foxe3 foxe3,LOC104952243,LOC102794361 coding upstream 243409 24278396 ~ 24281064 (+)
atf6 NA coding downstream 58738 24590326 ~ 24627700 (+)
LOC120565979 NA coding downstream 115282 24646870 ~ 24652453 (+)
fyco1a LOC103365712 coding downstream 136794 24668382 ~ 24684071 (+)
ghrhrl ghrhr,LOC102797970 coding downstream 160696 24692284 ~ 24709011 (+)
si:ch211-221n20.8 LOC103365710 coding downstream 178939 24710527 ~ 24722098 (+)
G97896 LOC104918463,LOC104952282 non-coding upstream 11440 24511971 ~ 24513033 (+)
LOC120565067 NA non-coding upstream 159298 24309609 ~ 24365175 (+)
G97807 sac3d1 non-coding upstream 268392 24254470 ~ 24256081 (+)
G97789 NA non-coding upstream 310614 24211860 ~ 24213859 (+)
G97788 odf3l2,LOC104949085 non-coding upstream 315183 24208229 ~ 24209290 (+)
G97938 NA non-coding downstream 106878 24638466 ~ 24642085 (+)
G98014 LOC106904844,LOC106963772,LOC102314236,LOC103463589,LOC106513892,LOC102207185,LOC100706092 non-coding downstream 253208 24784796 ~ 24785342 (+)
G98015 NA non-coding downstream 255743 24787331 ~ 24787540 (+)
G98019 mknk1 non-coding downstream 301849 24833437 ~ 24835517 (+)
G98021 NA non-coding downstream 306025 24837613 ~ 24875666 (+)
cks2 LOC104918474,LOC108230759,LOC102216377,LOC104949087,LOC105011584 other upstream 316332 24204341 ~ 24208141 (+)
cdc34a cdc34,LOC103368917,LOC104923648,LOC103397164,LOC107393183,LOC103156874 other upstream 873960 23631119 ~ 23650513 (+)
G97596 lpl,LOC108280930,LOC105906969 other upstream 1046655 23474782 ~ 23477818 (+)
LOC120565078 LOC104955513,LOC104923635,LOC103365215,LOC100690174 other upstream 1144098 23378731 ~ 23380375 (+)
pole4 NA other upstream 1200989 23321464 ~ 23323484 (+)
LOC120565649 LOC103373964,LOC107081966 other downstream 217429 24749017 ~ 24765225 (+)
G98012 dmbx1,LOC103373966,LOC108230579 other downstream 250330 24781918 ~ 24783881 (+)
elovl1b LOC106963699,LOC101078639 other downstream 320699 24852287 ~ 24873916 (+)
G98194 NA other downstream 1001237 25532825 ~ 25547089 (+)
slc35a3a slc35a3,LOC101471768,LOC102790943,LOC100705874,LOC108230529,LOC103354215,LOC106515047 other downstream 1198637 25730225 ~ 25738789 (+)

Expression


Co-expression Network