ebna1bp2


Basic Information

Item Value
gene id ebna1bp2
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 12056138 ~ 12061625 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039812334.1
CGGCGGACCATGTTGGTACACCGTTACACTCCGTCACTTCCTTCCCACGTGAAAAGCTCCATGCGTGAGGAGCCGTACATCCACATTGGATTTATTCGCGTTTCGAACAACTAGATCACATATTGTCATCTTATGATTATCGATAGCAGGACGATGGAgtcagcagaggaggaggaaatgcTCGGACAGGACTCTGAGGAAGACAGCGAGTTATCAGACGACGAGctTCAAGAAGCCTTTGCAAAGGGGTTGTTGAAACCAGGGATGAACGTTCTGGTGGATAAACCCAAAAAGTTTGTCAACAATTTGGAGGGTTTGAAACAGTGCCTTGCTGGTTTCCGCAAAGAGCTTCCCTGGGTGGAAAGGTTGGATATGACCAACCTGCCGGCTGAAGACGTCATTTCCAAAGCTGAAGGGAAAGTTCCAAGTGCGGCCAACGGAGATGTCAATGCAGATGATGATTTCCAAAGAGAGATGTTCTTCTACCGTCAAGCTCAAGCTACAGTTCTAGATGCATTGCCTCTCCTAAACAAGCATGGCATAGCCACCAAGAGGCCTGACGATTACTTTGCAGAGATGGCCAAGTCCGATCAGCACATGCAGAAGATCAGGAAAAAGCTGATCTCAAAGCAGCTGATACTGGAGAAGTCAGAGAAGGCCAAGAAACTGCGTGAGCAAAGAAAGTTCGGCAAAAAGGTCCAAATAGAAGTTATCCAGAAGAggcagaaagagaagaaggcTATGATGACTTCTGTAAAGAAATACCAGAAAGGAATGACCGACAAATTGGATTTCTTGGAAGGAGACAAGAAGAAGGGTAAAGACTCTGCTCAGGGCCCCAAAAATGCAGCAAACAAGAAGGGCCTCAATGCCAAGAGAAAATACAAAGACCAGCGGTTTGGCTTTGGAGGCAAGAAGAGTGGTAAGAAGTGGAACACCAAGGAGAGCCACAACGATGTTTCCAGTTTCCGCGCCAAAGTGGCTAATGCAAAGGGCGGCAAGGGAGGGAAGAAAGGCGGCAAAGGAGGAAAACAAAAtAAACGCCCGGGCAAGTCTGTGCGCAAGAAGATGAAGTCTCGCTCGTAAAAACTGACTGAGGCTGGTCAATAGGCTGGACTTGGACATTGTTTCTAGGCAGAGTTTCCCTCACCTGCTCCCCAGTCTCTCCCCCATATACACCAGGAGACATTTAGGAGAACATGGGcttttcttctgctctttttgTACAACATGCCTTCCGTTGATTGATATGGAGGACGCTTCAAGCCTCATAGAGAGTGGGACGTCCTGCCCTATTGCTAAGGAAGCTTGTGTGAAGGACATGACTGGTGAAGAAAAGGTCTCTCCTTGCAGAAATGGTTAACCCAAAAGTGTACCACATAGAGCTACCCACACCACAAAgtctttttttccaaaaagaGAAACGATTTGAATGTTAAGAAAATGTCTTTTCTTCTCTGTTAGTTGATATAGACCAGTTTTATTGTCTATGGACATATAATTGTCTCTCCATATGCGCATTTGATAAGGTGCTAACTACACCAGCCTCCTTGCCGTCTAATTTTACATTGTGTGCTCTTTGGAGTTTGGtgtattctgttttatttttttctaactcCGCTCCTTGAGCTATGGATTGTCTACCATGTGACATGACATTTTATAATATTGAGCAGCTGTTAGTTTTGCCCTTTCCTATAATAAGATTAGTATGTGATGGCCAAGTCTGCTTTGTATAGACATGTGCAAATGTTGCCCCTTCAAGTGTTTTTCTTAGCTTGCTAAGATGAAAATGCAAAAGGGCAGTTTTGGCGATGACACCTGTATGTTTGTATGATCAACAAATAAATCTGGACATAGGTTGCTCA

Function

NR:

description
probable rRNA-processing protein EBP2

GO: NA

KEGG:

id description
K14823 EBP2, EBNA1BP2; rRNA-processing protein EBP2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039812334.1 True 1868 mRNA 0.45 9 12056138 12061625

Neighbor

gene id symbol gene type direction distance location
ap1m3 LOC104919037,LOC103355575,LOC103463064,LOC107392936,LOC106528254 coding upstream 41704 11981529 ~ 12014434 (+)
c9h1orf210 LOC104958367 coding upstream 75852 11970363 ~ 11980286 (+)
ddah1 ddah1 coding upstream 139565 11834555 ~ 11916573 (+)
LOC120565976 col24a1 coding upstream 269205 11684362 ~ 11786933 (+)
dnai3 wdr63 coding upstream 479504 11556357 ~ 11576634 (+)
usp1 NA coding downstream 388427 12450052 ~ 12459145 (+)
angptl3 angptl3 coding downstream 433129 12494754 ~ 12499047 (+)
atg4c atg4c coding downstream 450981 12512606 ~ 12522434 (+)
foxd3 foxd3,LOC102785247 coding downstream 600294 12661919 ~ 12663893 (+)
alg6 alg6,LOC102784959 coding downstream 608596 12670221 ~ 12690258 (+)
G94813 NA non-coding upstream 136101 11916631 ~ 11920037 (+)
G94779 clg17h1orf52,LOC104926352,LOC103370521,LOC101473273,LOC102790030,LOC102310746 non-coding upstream 397066 11651522 ~ 11659072 (+)
G94747 NA non-coding upstream 478877 11576788 ~ 11577261 (+)
G94706 NA non-coding upstream 815901 11238444 ~ 11240237 (+)
G94691 NA non-coding upstream 861208 11194647 ~ 11194930 (+)
G94997 NA non-coding downstream 804287 12865912 ~ 12866251 (+)
G95002 NA non-coding downstream 933610 12995235 ~ 12995654 (+)
G95027 jak1,LOC102785183 non-coding downstream 1046064 13107689 ~ 13112320 (+)
G95040 NA non-coding downstream 1084680 13146305 ~ 13146795 (+)
LOC120564967 NA non-coding downstream 1310819 13372444 ~ 13375668 (+)
znhit6 znhit6,LOC102790327 other upstream 234256 11789135 ~ 11821882 (+)
LOC120565923 LOC103370579,LOC100695501,LOC102794561,LOC101470646,LOC102226407,LOC102291616 other upstream 597992 11359690 ~ 11458146 (+)
si:ch211-162e15.3 LOC103376230,LOC100712485,LOC108238459,LOC102795316,LOC102207055 other upstream 1107822 10946932 ~ 10948316 (+)
G94598 NA other upstream 1114894 10916925 ~ 10941244 (+)
atp11b atp11b other upstream 1641312 10363462 ~ 10414826 (+)
lrp8 LOC103355569 other downstream 100013 12161638 ~ 12443080 (+)
ror1 ror1 other downstream 681180 12742805 ~ 12865842 (+)
raver2 raver2 other downstream 943943 13005568 ~ 13100445 (+)
G95046 NA other downstream 1111400 13173025 ~ 13220372 (+)
LOC120565776 NA other downstream 1274109 13335734 ~ 13342098 (+)

Expression


Co-expression Network