uck2a (uck2,LOC100698935,LOC102786757)


Basic Information

Item Value
gene id uck2a
gene name uck2,LOC100698935,LOC102786757
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 30824223 ~ 30829271 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039812378.1
TCATCGTCACCATCATCAAATGGGAGGAGCGCAGGCACCCTAGTGTGTTGTAGGTTGTAGAGGGCCGCATCGCGCTGCAGATGAAGCATGACAGGCGATTGCGAGACAAAGCCAGGTGACCAAGACGAAAATGAAAGTATTAATCGGCATCCTTTCCTCATTGGCGTGGCTGGAGGGACAGCTAGTGGCAAGTCGTCGGTGTGCAGCAAGATCATGGAGCTGCTGGGCCAGAACAAGATTGACCACCACCAGCGGCAAGTTGCCATCCTCAGCCAAGACAGCTTCTACAAGGTCCTCACCCTAGAGCAGAAGGCCAAGGCACTCAAGGGCCAGTTCAACTTCGACCACCCAGATGCATTTGACAATGACCTCATAATCGCGACTTTGTGGAACATCAAGGAGGGAAAAACTGTACACATCCCTGTTTATGACTTTGTTTCCCATTCCAGGAAGGAAGAGACGGTGACAGTGTACCCTGCTGATGTGGTGTTGTTTGAGGGCATCCTGATGTTCTATTCTCAGGAGATCCGAGACTTATTCCAAATGAAGCTGTTTGTAGACACCGATGCAGATACACGTCTATCTCGAAGAGtgCTGCGTGATATAAGTGAACGTGGACGAGACTTGGAAAGCGTTCTAGCACAGTACATTACTTTTGTCAAGCCTGCATTTGAGGAGTTCTGTCTGCCAACAAAGAAATATGCTGATGTGATCATACCGAGAGGAGTTGACAATCTTGTTGCCATAAATCTCATAGTTCAGCACATCCAGGATATTTTAAACAGTGGTTTGACCAAACGGCTGAACGGGTGGATTAATGGTCATGGAACAACAAAGAACCAGCCAAATGATTCCAGCAGTCGGCTCCAATGAGTGCAGCTCTCCccaaagagaggaaggagggttTACCTGTACATGCCACATTTGCTCTACCTTGTGGCTAACAAAGCAGGAGTAATTTGCCAGGGAATCAAAAGGCCTCTTTTTGGTATCCTTTGTGGAGCTGGTTTAAAGTGTTTGTATTCAGTTCTAGTTTTCTCTATAGCTTGTGTACTGTATGACATGGAAGGTTTAGAAATACAAAGAGACTAActtgtaatttaatttaaaactgctgtttgcCTTTACCACAACACTGAAACTAATTAAAGAAGTTTTTGTGTCTAAAAAAGTTTCAACACATGACAGCCTTTAACCATACAATAAATGGAGTGTAGCAACATACTGTTTTACAGCCTTACCCTATCTTACTACCGTTAAAGGCTAATTCCCTTTATCAATGCAACTTGACAATTTCTTTTTCAAGCGCTGTATGACACATATTTTGACTTGTACAAATAGATTTTTGAAATAATGTACTTTGGATTGAAATTTTTGATGTTTGTTTCACGTTGCCCCAAGCTACACTTGCTTTGTCTTGTCTAAAACTAACAAACTAAATACATTAGTCAAATAAAACAACAGATTCCCACCTCAAATCATCTTGATGTATGACATCACAAAAAATGTGTACCGTCTTTGTGgactaatgattttttttttatttcaatgtgATACTGAcattacattaattcatttaataAGATTTTGGTAACAAAGAACTTATGTTATGAAATTACCACAAAGTATTACTTTTCTTTGATTCCCATAAACTTGAGTCTTCAGATACTAATGTATGCAATGTTCATGTGAAATAGTGTTACTAAATGCATTGAACTATAAAATGTGAAGTTAAAGATCCCCAATGTTGATCTGTAAATTATGTTTAATGGAGTTTTCTTCCTGTATACTTTTTTCACATGATAAAGTTCTCAGGTACTGTTTGCCCCAAGTGA

Function

symbol description
uck2 Enables identical protein binding activity. Predicted to be involved in CTP salvage; UMP salvage; and phosphorylation. Predicted to be active in cytosol. Biomarker of pancreatic cancer.

NR:

description
PREDICTED: uridine-cytidine kinase 2-A isoform X1

GO:

id name namespace
GO:0044206 UMP salvage biological_process
GO:0044211 CTP salvage biological_process
GO:0016310 phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0016773 phosphotransferase activity, alcohol group as acceptor molecular_function
GO:0004849 uridine kinase activity molecular_function

KEGG:

id description
K00876 udk, UCK; uridine kinase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039812378.1 True 1835 mRNA 0.40 7 30824223 30829271

Neighbor

gene id symbol gene type direction distance location
LOC120566104 pbx1,LOC104964292,LOC108272157,LOC103479586 coding upstream 29394 30727013 ~ 30794829 (+)
sec16b LOC104942848 coding upstream 265069 30541357 ~ 30559154 (+)
gng12b NA coding upstream 288350 30529968 ~ 30535873 (+)
LOC120565046 LOC103368800,LOC102778977,LOC102199240,LOC101469842,LOC100700999 coding upstream 338401 30481514 ~ 30485822 (+)
dr1 dr1 coding upstream 342843 30477831 ~ 30481380 (+)
magoh magoh,mgn,LOC106560432,LOC107387361,LOC101074452,LOC107731141,LOC107549138 coding downstream 3530 30832801 ~ 30836627 (+)
akr1a1b akr1a1,LOC102789595 coding downstream 104637 30933908 ~ 30945625 (+)
uhmk1 uhmk1 coding downstream 574502 31403773 ~ 31513916 (+)
mcf2l2 NA coding downstream 953955 31783226 ~ 32159445 (+)
ect2 ect2,LOC102798372 coding downstream 1391762 32221033 ~ 32411447 (+)
G99530 NA non-coding upstream 103363 30720621 ~ 30720860 (+)
G99528 NA non-coding upstream 130218 30693639 ~ 30694005 (+)
G99527 NA non-coding upstream 143507 30680506 ~ 30680716 (+)
G99494 NA non-coding upstream 294403 30529609 ~ 30529820 (+)
G99493 NA non-coding upstream 295135 30528826 ~ 30529088 (+)
G99567 NA non-coding downstream 35629 30864900 ~ 30866452 (+)
G99573 NA non-coding downstream 39718 30868989 ~ 30869251 (+)
G99576 NA non-coding downstream 53107 30882378 ~ 30883266 (+)
G99577 NA non-coding downstream 54993 30884264 ~ 30885185 (+)
G99578 NA non-coding downstream 56414 30885685 ~ 30885971 (+)
G99545 NA other upstream 12987 30810518 ~ 30811236 (+)
si:ch73-389b16.1 ccdc18 other upstream 394932 30427503 ~ 30429291 (+)
G99297 NA other upstream 1159133 29663633 ~ 29665090 (+)
ralgps2 ralgps2 other upstream 1958736 28775375 ~ 28865487 (+)
LOC120565530 LOC100702602,LOC101154857,LOC107096371,LOC105928898,LOC101076602,LOC108230771 other upstream 2049670 28772362 ~ 28774553 (+)
slc1a7b LOC103368436,LOC102788729,LOC102303821 other downstream 266610 31095881 ~ 31302827 (+)
LOC120564930 NA other downstream 784618 31613889 ~ 31643446 (+)
G99791 NA other downstream 793427 31622698 ~ 31625796 (+)
G99803 NA other downstream 800545 31629816 ~ 31631501 (+)
LOC120565823 NA other downstream 932721 31761992 ~ 31767539 (+)

Expression


Co-expression Network