dpt (dpt)


Basic Information

Item Value
gene id dpt
gene name dpt
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 40715933 ~ 40722835 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039812404.1
ccagaccttcctccacagagctgtggagatagggctggcaatgccagactacTGCACAAGAAAACTTACTTGGACAAGCAACACAAAGGTTAACCCGTATCTACGGTGAGACTATGTGACTGCTCTGTCTCAGAGTCTACCTTAAAATGTCAAGTGAGGTCCACTTTTGGATTTGTCCCAAGAGCAGCAAATTACACATCACTCCTGGTTACAAAACATCTGGATAACAAAAGACCTGGAGGAGCTTAAAGGGAGGCAGCTGCAAAGAAGCGCAGCAGACGGACTGATTTCTTCAACATGAATCCTGCTCTGTTGGTGTTGGCGTTGTCTTCGCTGGCCACAGTGGCAGCTCAGTCTCACGACCATCATGACATGGGCTGGGTCAACGGCTACCGTCAGAGCTTCAACTTCCAGTGTCCCCACGGAGAGGTCCTCGTGGCCGTCAGGAGCTACTTCAGCGAGACGGACGGCTCGGACCGCCTGTGGACGTTTGAGTGCCAGCCCACGCCTGAGGGTCTGGGGGAGCCCAGTGACTGCTGGTGGGACGACATCAACCGTGCTGGGATGGAGTGGACTTCAACATGCACTCGTAACGGCCTGGTAGCAGGCGTACAAAGCAAGTACTTTGAATCTGTTCTTGACCGGGAATGGCAGTTCTACTGCTGCTATTACAAACGCCGCTGTCCCTACTCCTGCATGAAGACCAATGACATTCCTGAACACTTCAGAGAGGAGGCGGAAATGGTGATCCCTTCTTATGGCTACTTCATTCGTGGTGCACTGACACCATTTTGTCTTGTACTCTGTTTCAGAGATCGGCAGTGGAAGTACATCCTGTGCAGAATGACAGACTTTGACTGTGAATTTGAAAATTTATAGACTTGTAATCATCattttgatgttgtgtttttttaatgaaacatacatatttactcttacatttaaacaaaaacatagtACTGGCATTATACATAACTGATATGATTCATGTTTTCATTCATGTATTTacttttgttgaatgaatgaacCACAGGCATGTGATGTATGCCTGTATAATCACTGTTTTTTAGTTTAGCATgcaaaaatgacatataaagATAAATGTCataataaacataaacacagagGGTCTAAAGGGGATTTGGGCTTGAGCAGATACTTTAGAAAGCTTTGGAAAGGGTTTTAATTCAGAGACCGGAGGAACTGGAAGTCATTTGGCAGCATGTGAAAGTGTTTTTCCACCAACAAAAGTCAATTATGTGATGCTGTGGTTATGGTGGTAGAAAACACTGCATCAGGCTCTGCTCCAAGATCTCTTAGTTGAGCTGAGTTGATGGTCAAACAAAGTGGTTTTATTTGGACCATTTTCACAGTTATAAAAGCATTCCGTGAGCTACAGGGTGTGAATGATTAGGATATTGTCTTGGAGGTAACACTTGGAACAATTGTGTATGTGTTGCAAGTAATGAGACACTTCTTTCAGAATCACTGCCAACATGAGCTTTGCATGCAATTAAGAGTGTCCCACTTGCTTTCAATTGCATCTCTCCTTAATTGAAGTCTCTTGTTCAGTTTGGCAATTACagccatacagtatattgtactGGAACTCATGTAATACTGTTTGGAAATGGGCTTAAAACCatctatttcttttatttattactttgtaAAGTCATTTATTTGGTGTGTATCTGGTGTGTTCGTCCATTCGACATGAtggaaaaaagcatcaaataaCAGAGTATATTATGTTTGAAATGAAATTCAAGAATATGAATTTTGAGTATTGAGATAACTGAAAAACAATAGGCTACACTCGTCGAGGGAAAAGGTTGTGGGAGAAAGGATCATTTAGCTGGTAATCCCTAATGTCAGACCCTTCCAGCAGCATGTTATGGCAATATAAAGCCGTGTTGAGTTTGCCTTCAGCCAAGTTAAGCCCAAATGAGCTGTTGATATCGTCATGACTGACTACATCCTCTGTGTTTTTGGAAGGCTTACACCCTGACATATCAACAGcaaatcagtttttttattcacaTGGTAGTTTGTGGAATGGAGAAAAAATTATAAACGAATGTATCTCAAGCAACTTGAAGTTATTATTGAAGATTttcaaaggaatagtttgacattttgggaaagttGAAGTTCTGCTACGGAGAGTTAGAAGAGACAATCAATACTACTCTTATATCTGTCTGTTAtatacagccagcagccacttAGTTAATCTTAGAATAAAGACTCaaggtaataaaataaaagcacttctaAAGTGAA

Function

symbol description
dpt Predicted to be involved in collagen fibril organization. Predicted to be located in extracellular region. Is expressed in several structures, including central nervous system; digestive system; eye; fin; and heart. Orthologous to human DPT (dermatopontin).

NR:

description
dermatopontin

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039812404.1 True 2286 mRNA 0.41 5 40715933 40722835

Neighbor

gene id symbol gene type direction distance location
nme7 nme7 coding upstream 32691 40657846 ~ 40683242 (+)
LOC120564870 bivm coding upstream 65103 40643959 ~ 40650830 (+)
tmem131 NA coding upstream 78249 40603534 ~ 40637684 (+)
ube3a ube3a,LOC103365788 coding upstream 133869 40567947 ~ 40582064 (+)
gabrb3 gabrb3,LOC106914751,LOC103365202 coding upstream 229324 40417993 ~ 40486609 (+)
zbtb11 zbtb11 coding downstream 14899 40737734 ~ 40747377 (+)
bcl6aa bcl6 coding downstream 363538 41086373 ~ 41105748 (+)
trnap-cgg_3 NA coding downstream 502256 41225091 ~ 41225162 (+)
trnap-ugg_3 NA coding downstream 502799 41225634 ~ 41225705 (+)
im:7152348 NA coding downstream 503775 41226610 ~ 41227656 (+)
G101832 NA non-coding upstream 206566 40508891 ~ 40509367 (+)
G101831 NA non-coding upstream 208174 40507500 ~ 40507759 (+)
G101823 NA non-coding upstream 228912 40486791 ~ 40487021 (+)
G101796 NA non-coding upstream 455324 40260363 ~ 40260609 (+)
G101688 NA non-coding upstream 580433 40135207 ~ 40135500 (+)
G101990 NA non-coding downstream 137202 40860037 ~ 40940317 (+)
G102006 NA non-coding downstream 388738 41111573 ~ 41114235 (+)
G102021 NA non-coding downstream 432087 41154922 ~ 41156467 (+)
G102022 LOC106527457,LOC108240210,LOC103354232,LOC107088662 non-coding downstream 433717 41156552 ~ 41157040 (+)
G102074 NA non-coding downstream 486825 41209660 ~ 41268656 (+)
atp10a atp10a other upstream 156038 40515093 ~ 40559895 (+)
LOC120565298 cdkl5,LOC103356958 other upstream 975656 39693912 ~ 39740277 (+)
reps2 reps2,LOC102792668 other upstream 1123171 39561061 ~ 39592762 (+)
LOC120565708 LOC103369944,LOC100698021,LOC101482931,LOC102791229,LOC102291415,LOC102212992 other upstream 1251483 39454120 ~ 39464450 (+)
prdm5 prdm5 other upstream 1354200 39323584 ~ 39361733 (+)
G102165 NA other downstream 729839 41452674 ~ 41453306 (+)

Expression


Co-expression Network