cep19 (cep19,LOC102796355)


Basic Information

Item Value
gene id cep19
gene name cep19,LOC102796355
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 37836407 ~ 37838105 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039812427.1
TCAGATATCAATCATCACCGTCATTCTGAGTGAAACAATATGATTTTAAAGCATTTACTAGAAATGTAGGCAGGCTTCGGCCAAGACAGAAAGGTTGGAGACCGACAAGCAGCACCCAGGCAACGCTAGCGCCATAGACAGGTTAGCGCGTATCATCcttttactgtctatgctaTTATCTCTGAAACTCGCTCGTCAAATGCCCATTGAAAATATATTAATTATGGTTCAAAAGTGTTAGCCTTTTACCGCTGTACTTCAAGGGGAGACCAGTTAAAACTAGATTGCTGTGGACATTTAACAGAAGATGAGTTTCGAGGCAAAGCGATGTGGAGTGCAGTTCACTCCTCCCTCTATAGTTTTAATTTATGAACACAAGGAAACTAAACATGTGCGAAAAAGAATAATACCCGTGCGGAACTTCTCAAAATATTCTGACTACAGCATGGCTGCAGAAAGTCTGAAGAATCACCCTCGACACAGGGACTACCTGGAGGGCGTGTCCCAGAGCCAGTTGGAGAAGCTTCACATCATCCTGCGCGATCACATGCAAGGCTTCAGCTTGGAGCACAGCCTGGCTTCGTTCAGCCTGGACCCCGACGAAGACCTCAACAAACTCGACGACGACGAGCTGGCTCGCAAGAAGGGCCAAATGGACGAACTGTTCGAAAAGAACCGGAAGCGCAAAGACGATCCTGACTTTGTTTACGATGTAGAAATGGATTTCACCAAGACCGCCGAAGAAAACTGCAGCTGGGACGACGAGTCTGATGATGGATTTTGAAACTGTTATTCCAAAACTTTCTCCGACCTTTCTGACTGAAAATCAGCCAACACGCTGATGTTCTATTAGATAACAGGGAAATCTGACGGATGTTTTGTCCATCCCGGGGCCATTTCCATCAACAAGGGACGTAGCAACATggctttgcgtaaacatacacgccactttcctaaagccaaatggcgtgttatctgtatgcattttgagctatccccatgtatgtctacgctgtatacag

Function

symbol description
cep19 Predicted to be involved in microtubule anchoring at centrosome and vesicle targeting, trans-Golgi to periciliary membrane compartment. Predicted to act upstream of or within cell projection organization. Predicted to be located in cilium; cytoplasm; and cytoskeleton. Predicted to be active in microtubule cytoskeleton. Orthologous to human CEP19 (centrosomal protein 19).

NR:

description
centrosomal protein of 19 kDa

GO: NA

KEGG:

id description
K16801 CEP19; centrosomal protein CEP19

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039812427.1 True 1022 mRNA 0.46 2 37836407 37838105

Neighbor

gene id symbol gene type direction distance location
aqp12 LOC104962685,LOC103357409 coding upstream 20062 37814617 ~ 37816345 (+)
si:ch211-121a2.4 LOC100711177,LOC104919118,LOC102794329 coding upstream 39458 37793281 ~ 37796949 (+)
dhcr24 dhcr24,LOC102794897 coding upstream 44783 37782584 ~ 37791624 (+)
usp24 usp24 coding upstream 86212 37699054 ~ 37750195 (+)
plpp3 plpp3,LOC103365633,LOC104959557 coding upstream 270506 37532503 ~ 37565901 (+)
LOC120566156 plekhb2,LOC106613863 coding downstream 5621 37843726 ~ 37849600 (+)
LOC120566157 plekhb2 coding downstream 11968 37850073 ~ 37854359 (+)
cts12 LOC104962698,LOC103357414 coding downstream 45770 37883875 ~ 37889889 (+)
lama3 NA coding downstream 52187 37890292 ~ 37915047 (+)
impact hrh4,impact,LOC100712525,LOC102292561,LOC101478323,LOC102218847,LOC105928845,LOC103137092,LOC103376683 coding downstream 113053 37951158 ~ 37990276 (+)
G100940 NA non-coding upstream 18650 37817373 ~ 37817757 (+)
G100938 NA non-coding upstream 22367 37813783 ~ 37814040 (+)
LOC120565000 NA non-coding upstream 22997 37809268 ~ 37813410 (+)
G100926 NA non-coding upstream 69631 37766191 ~ 37766776 (+)
G100917 NA non-coding upstream 84269 37750861 ~ 37752138 (+)
G100956 NA non-coding downstream 797 37838902 ~ 37839531 (+)
G100963 NA non-coding downstream 33351 37871456 ~ 37873735 (+)
G100978 NA non-coding downstream 118499 37956604 ~ 37973191 (+)
G101066 LOC108281047 non-coding downstream 160350 37998455 ~ 37998703 (+)
LOC120565003 NA non-coding downstream 175084 38013189 ~ 38015274 (+)
G100843 NA other upstream 346335 37463914 ~ 37490072 (+)
prrc2c NA other upstream 878047 36932655 ~ 36958360 (+)
G100671 NA other upstream 1137538 36695437 ~ 36698869 (+)
sass6 sass6,LOC102776185 other upstream 1224661 36596041 ~ 36611746 (+)
smim24 NA other upstream 1301825 36495484 ~ 36534582 (+)
usp46 usp46 other downstream 1028330 38866435 ~ 38880605 (+)
prdm5 prdm5 other downstream 1485479 39323584 ~ 39361733 (+)
LOC120565708 LOC103369944,LOC100698021,LOC101482931,LOC102791229,LOC102291415,LOC102212992 other downstream 1616015 39454120 ~ 39464450 (+)
reps2 reps2,LOC102792668 other downstream 1722956 39561061 ~ 39592762 (+)
LOC120565298 cdkl5,LOC103356958 other downstream 1855807 39693912 ~ 39740277 (+)

Expression


Co-expression Network