lama3


Basic Information

Item Value
gene id lama3
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 37890292 ~ 37915047 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039812428.1
TTGCTCCGGTTTGTAACTCTACTGAGAAAAGCTCAGAGTTTAGGCCTGACGGACACAGTCAGATCCATGAGAAGACACACAGCACGAAAAAGTTCTGTGATCCTTCCTTCAATAACCAGACAGCAGCCGCTATCACTCAGAACTGTCAGTTCAACACCTCGGGGGGCCGCTGTGAATACTGTAAAGAGGGTTACTATGGAAACGCAGCCAACAGGACCTGTCGTGCCTGTCCATGTCCCTTTACATGGAACAATTTTGCGTTGGCCTGTCTGGACATCGCCTCAGGAGGGGTTGAATGCTTGTGTAAACGCGGTTACCGTGGAGCCACATGTGAGAGATGTGCATTGGGTTACTACGGCAATCCAATGGTGCACGGAGGCAGCTGCAAGCCCTGCAATTGCAAGGATGGCTCGAACATTTGTGATTCTCTGACTggagAGTGCATCACATCTGGTAACAGCAGCTGTGGTGCTCACTGCCATGAATGTGACGGCTCTACTGTCTCCTTACTGGTTGACTTGGAAAAGATGGACGATGCCTTGGCtcggctgcagcagcagctggagaATGTCTCTAATGGCCCTGGTTTACTCTCCAGGCTGGAGGCTAACATCTCTGAAACCAAGAGTCTGGTTGGGAGCTACAGCGCTGCTGTGAGGCACCTGGATCCAACGGTTGAACAGCTGGAAGTAGATGTGGATGTTGGCAGAGATGACTTGAGTCAACTGACTGACAAGACACTTAAATCTGTATCAGATCTGGAGAAGGTCTTGCAGAATGTGAATGGAAGAAAGTTAAAGGCAGAGGATCTTCTCTCTGAAGCGTTCCTTATAGCAACACAAGATTTGATAAAGCAGAAACCTGGAGAGTCAGTTGCTGTTTCTGAAAACAACAAAGCCAGGATGATGGAGGAGGCTCAGTGCATTGTGCAGGAAATGAGAGGCTGCACtgctcagagagacagagctgGCAGGGAGcaggaggacacacacaaatTGTTGGACATAATCAGGAACAACATGGCAGATCCTTTGGAAACCAAGCCGACTGGAGACTCTCTGATGGCCTCAGACTCTTCTCTGAGCGAGGCAGCTGAGCTGCTGACAGACGCAGGGGACAGAGTCGACAGGACACAGGCCCTTAACCTGAACGCTTGTACCGCACTACAACATCTGGAGCATCTTCAAACACAGCTGGAGAGAGAACAAAGTACGCTTCTTCCTGTGACTGAAATTACCAAAGATCTGCTAATGAATAtcactgacatttttttaatgcttgaggaaataaaaaaaGAATTTGAAAATCATGCAGCTCAGCTAGATGGTGCCAAGCGGGAACTCTTTAAGAAGTTAAATAACATGCAGATTACGGCATTGGTGGATATAGTAACCAAAGCTGAGAAGCATGCAGAGGAGCTCAACAGAGTGACAGCAGAACTTCAAGTGGTTCATAATGCTACCAACAGTACTGAGCTGCTCAGTGTGCTGGGTATAGGTGTGTATGACAGCATCCGAAATGCCGTAGAAAAGGCAGAGTCAGCAGCAAATCAGTCCAGAGAGGCTGCGGATGAAGCCTTAAAGGATGTGAAGGAGGGAGGCCTGGTCAACGGGGCCGCAGGACTCAACGATAATTCAACTCGTTTACGGACAGAAGCCAACGAGACTCAGAGTGACTTCAAAATGCTGTCACGTAAAGTGAACACCCTCAGAGGCCGCATGAATATGCAGAAGGAAAAAGGAGAATTGCTGAGAATGGGCATCCCAAACGTTAGTGGCAACCTCAAAATGATCAGAAGAGATGACACAGACGTTCTGATAGAGTCCGCGAAAACAACTGCAGCTGCCTCTAACTCCACAATCAGTAATATAACAGAGAGACTGAGAAATATCAGTCAGAAAGTGGAGAGAATACCTCTGACCAAAGTCAGTGTGAATATAGATGATATGTTGGTTGATGCAGACCAGGCATTGAAGAACTTGAACACAGCCCTTCCTGTGCTGAAAGACAAAATCACACAAGTTGAGGCTCTCAGTGGGAAGACGCCTCCTACTGCCAACATGACAGAAAGCATCAGGAGAATCAAGGATGTGATAGAGGAGACAAGAAACTTTGTTAATAGGCTCCCAGTTGCCACCACTTTCAACGGAAAAGGTCACGTTGAGCTTCGTCCTCCGAGAAACCCTGAAGACATAAAATCGTTTACAGCCGTCGATATGCTTCTCAATCGCCATCAAAACAATCCCTCCAAGGTTGACTTCAGACGAATGCGACGCCAGAACAGCGTCTTCGTTTTCTACCTGGGCAACAAGAATGCCTCTGGAGACTACATTGGGATGGCTATCAGAAGCAATGTGTTGATTTGTGTCTACAAGCTGGGTGGAGTTGTCCATGAGGTGGAAACCAgccaaataaaaacaaccacCAATGTGAACTCCTCAGACTTTGACAGGGTTGTCTTCCACAGAGTTTACCAAGATGCTGAAGTTAACATCACACAGAACTTCACATCACAGAAGCCAGTCAGCCTCACTCCTAAACGTAACCTTCCAAACACGACGACCGGCATCTACCAACTGGATCCAGACAGTCTTGTTTTCTACGTGGGAGGCTATCCTGAGGACTTTACACCTCCAGTGGAGCTGCATTACCCCAAGTACAAAGGAGCGATGAAACTTTCCTACATAAATGACAATCCTGTTTGTCTGTTCAACTACAAGCATGCAGTCAATATGGATGCAAAGCAGCCTATTGTGAAGATTCCCCAGTCAGAGGTGTCTGATTATTATGAGGGAACAGGTTACCGCATGGCATTCATAAAGGACCCGgacaagagaaagagaagatggTTCAAATTTCACACAAACAGCCGAGAGACAAACGCCTTGCTATTCTACATCGGAAATGAAGAgtcttttttctgtgtgtttgtggagagAGGCTTCCTGGTGCTTCAAGGACAGCAAGCAGGCCGGGAGCTCAGAGTTCAGAGTGCTGAAAAAGTGTCTCTGTTTGACGAACACTTTGCAATCACTATTGCAGACAGGTTTATTGTGCACTACGGACCACAGAAGGTCTCCACAGATCACAATCGAACAAACTTCATGAGTTATTACATCGGGGGTGTACCGTCACAGCTCAGACAGAGACACAACATCACAGCTCCACCGCTGAGAGGATGCGTGGATCACCTGACAGCAGACGCTGAGATCGTAAAGTACAACAGAACGATTGGCGTCAGCGATGGATGTCCAGTCTCACTACTGGGTGTTCGTTCAGCTACGTTGTATTCAGCTCTGTCTGTTGATTCCCCGTCTGTCTGGGGTGTACAGCCAGCCAGAGTCTCTCTGGGCTTCAGGAGCACAGACGGACACGGTGCTCTTCTCAGGAGCAGCTCTCAGGGCTCCATCTCTGTCCATGACCTGCAGCTGTCCCTGGCTGATGGCTACGTAGTATTTAATAGTGATAATTATACCTTGAGGTCGGATAAAAGGTACAATGATGGAAGCTGGCACTACTTGTCTGCAGTATGCAGGCCAACAGGGCTGGAGCTCAGCATCGATAATGTAAAAGTGATTCAGGGACAATCACCCCATAGCAGGCCAGTGGATCAACATTTGCAAGGAGGGAAATTTAAAGGCTGCATCGCTAACCTCTACACAAGGAGGCCTGAGCAGAGCTTTATACCTGCCGATCTAAGCTCATTTTCACAAACGGTAGACGTAGTCCTTGGCCTGTGCAGTCTCCATCCGCCACCACATACCGAGCTGCTACCACCACCCGTGGTGAAAAAGCCCAAGAAACACAAACCCATTCAGGCTCCGGCAGGCAGCCAGTGTAAACCCCGGCGGGCACACCGGCGTGAATGGCAGCTCTCTGGGGAGCACAGCTGGCTCAGTTACACCCTGCCACAAGAGGACCTCAATCACAGGCCTCACTTCTCCCTCGACGTAAAGACCAAGACGTCCAAAGGGCTGATCCTCCATGTAGCCGGGAGAGGAGTCATCCCCCTGCTGGCTCTGTACATGGCCAATGGCAAGATCAAGATGTCACTCGGACAAAACCGAATCATCCAGCACAAGCAGAAGAGCAACGACGGGAACTGGCACAGAGTTGAGTTCAGTGTGGAGAGGAGCACTTTTCATCTGCTGGTTGACGGGTTCCGTGTGACTGATGGACATCTGCCAAACAACGAGGGATCATCTTTAGACCTGCACAACCCCGTGTATCTGGGAGCTGATCCCAAAAGCAAAACCACAAAAGGACACAACATTCCCACGAACAGTGTTATTGGTTGTATACGGGACTTCAAAATGAATGAGGTCGTTATGGTGGACCTTGAGGCAAGCTACAAAACTTTACCCTGCTTCGATGGGCTCGCAGAGATCGGGACATACTTTGGCGGCGGTCACATCGTCTTGGAGAATTATTTCACCATTGGCTCGGAGTTTGTGTTGGCCTTCGAGCTGCGTCCTCAATACCTGACAGGTCTTCTCTTCCATGTGCAAAGTCGCAAGTCCAGCCTTAATGTCTTTCTAAAGGAAAACAAGGTGGGTGTCGGCGTGAGTGACGGTAACAGGGCTGCCAGTGCCTCAGTGACTCCTCGTGTAAGCCTCTGTGATGGAAAGTTTCACCAGGTTACAGTGTCCAAACAACGTGACGTTATCAAACTAGTGGTGGACTCCATTTCTCAGCAGAAAGCCGTCCTCTTCACCTCCACCTCAACAACACTGGATACACTTTACATAGGAGGGACAAGAAAGCAGAACCGAGCCCCCGTGCGCTCACCATTTGTAGGCTGCTTACGAAATGTGAAGCTTAATGGAAGACCGGTTGCATTTGAGAAAGGATCCAGGGTGGTTGACCCTGTCAGCATTAATAGTTGCCCTGCAGACTAAGGCTGTGTCATTAATGGGTGACGCACCAACTTCTTTAACCGCACAGACCCTTTGgcatcattaaaaagtcatattatgcaGACAGGCTTAGGTAAAAACCCACAGAAATTAATTAGAAATTCTATTAGGCAAGCACAGTCCCCCGTAAGATAATGTTGCTACACCTGTCAACTTTTCCATTTTTGCACAGCACATGTGCAGTTTATAATGATTACAGGTCAGATTTACCACTCAGAGTAACTAAGCCTTAGTCAAACTAAATTTAGAAACAAAGGTCCTGAATTCAGTCACAGTCATTTCTTGCCGGCGACCGTTTAATGTGTCAGCGGAAATAACATCTATTGCTAGTAAATTTAACCAACTGTAGCCAGCTAATTAAGCTAATGTTAACTTAATGAGTTGGTTGA

Function

NR:

description
laminin subunit alpha-3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039812428.1 True 5305 mRNA 0.48 37 37890292 37915047

Neighbor

gene id symbol gene type direction distance location
cts12 LOC104962698,LOC103357414 coding upstream 403 37883875 ~ 37889889 (+)
LOC120566157 plekhb2 coding upstream 35933 37850073 ~ 37854359 (+)
LOC120566156 plekhb2,LOC106613863 coding upstream 40692 37843726 ~ 37849600 (+)
cep19 cep19,LOC102796355 coding upstream 52187 37836407 ~ 37838105 (+)
aqp12 LOC104962685,LOC103357409 coding upstream 73947 37814617 ~ 37816345 (+)
impact hrh4,impact,LOC100712525,LOC102292561,LOC101478323,LOC102218847,LOC105928845,LOC103137092,LOC103376683 coding downstream 36111 37951158 ~ 37990276 (+)
LOC120565667 hrh4,LOC104967234,LOC100712525,LOC102292561,LOC101478323 coding downstream 68287 37983334 ~ 37984742 (+)
LOC120565755 LOC103357426,LOC102194044,LOC102293839,LOC102798827 coding downstream 177979 38093026 ~ 38136180 (+)
nrl LOC104947091,LOC103357430,LOC105353878 coding downstream 253414 38168461 ~ 38178363 (+)
LOC120564983 LOC100690982,LOC103357424,LOC102799593,LOC101477196,LOC104919101 coding downstream 263984 38179031 ~ 38188686 (+)
G100963 NA non-coding upstream 16557 37871456 ~ 37873735 (+)
G100956 NA non-coding upstream 50761 37838902 ~ 37839531 (+)
G100940 NA non-coding upstream 72535 37817373 ~ 37817757 (+)
G100938 NA non-coding upstream 76252 37813783 ~ 37814040 (+)
LOC120565000 NA non-coding upstream 76882 37809268 ~ 37813410 (+)
G100978 NA non-coding downstream 41557 37956604 ~ 37973191 (+)
G101066 LOC108281047 non-coding downstream 83408 37998455 ~ 37998703 (+)
LOC120565003 NA non-coding downstream 98142 38013189 ~ 38015274 (+)
G101080 NA non-coding downstream 130997 38046044 ~ 38046823 (+)
G101081 NA non-coding downstream 142541 38057588 ~ 38062672 (+)
G100843 NA other upstream 400220 37463914 ~ 37490072 (+)
prrc2c NA other upstream 931932 36932655 ~ 36958360 (+)
G100671 NA other upstream 1191423 36695437 ~ 36698869 (+)
sass6 sass6,LOC102776185 other upstream 1278546 36596041 ~ 36611746 (+)
smim24 NA other upstream 1355710 36495484 ~ 36534582 (+)
usp46 usp46 other downstream 951388 38866435 ~ 38880605 (+)
prdm5 prdm5 other downstream 1408537 39323584 ~ 39361733 (+)
LOC120565708 LOC103369944,LOC100698021,LOC101482931,LOC102791229,LOC102291415,LOC102212992 other downstream 1539073 39454120 ~ 39464450 (+)
reps2 reps2,LOC102792668 other downstream 1646014 39561061 ~ 39592762 (+)
LOC120565298 cdkl5,LOC103356958 other downstream 1778865 39693912 ~ 39740277 (+)

Expression


Co-expression Network