LOC120566156 (plekhb2,LOC106613863)


Basic Information

Item Value
gene id LOC120566156
gene name plekhb2,LOC106613863
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 37843726 ~ 37849600 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039812435.1
GGGCGGGGCTAAGAGCAACTGTGTCCACTCGGTTTATTGGTCAGGCTTTTGGACTCCCAACGACGAGGGCATCGTCTTTTTTGTACATCTCACTTCCGTGTTTGCGCTATCCTAACGAAATACTTAATCTTtttcataaaacataaaaataatcaAgtGTTGCCTGCCTAAGATGGCTATGGTAAAGAGTGGTTGGCTCCATCGACAAAGTACCATACTGCGTCGGTGGAAAAGAAACTGGTTTGATTTGTGGGCTGATGGACGGCTCGTGTTCTATAATAATCAGCAACGGCGTGACATGGAGGATGACATCCACATGAGGGTCGACTGCATTAACATCCGCAACGCTGTTGCATGTCAAGAGCTGAACCCTCCAGAGGGGAAGATGCGTGATGCCTTGCTTCAGATAGTGTGCAGAGATGGACGGGTCATCAGCCTGTGTGCAGACAGCGCAGACGATGCTCTGGCATGGACCATGGCACTTCAGGATGCCAGAATTAATGCGgtGGTCGCTACACCTCAGATCGGCTTTGCACAGGAAGTGATAGCATCTGCTCCTCCCCCCTACTCAGAATATGCTCCACCACCTCAGCAGGGTTATGCCCTGGGACCGTATGGAGAATATGTTGCACCTCCGCCACATGCTACACAGATTGTTTACTCTGCTGATGGGCAGCCCTACGCTTATCCTTATCACTACCAAGgTGGGTACACCACTCCTGGAGTGAACCATGTTGTTATTCAACGCCAGCATGAAGACCGAGGAGATGTGGCTTTGGGCATGCTCGCTGGAGCAGCAACTGGTTTGGCACTtggctctctcttctctgtcttctGATGTCTTCATTAATGTACATTTAGTAGCATATACTCCCTATgtgttctacacacacacacacacagtaaatacTGTTAGCACTTTCTCATATGCCCTGTGTGGCAGTTTCCCATCCCCTTTGTGTTGAATGAATATCTCAATATGAATGTTCTTAACCAAAAAGTACAACAATTACTCACTTTTCAAGAGTTATTTAAATGACAGGAAATAAATTACTCCttttgtgtactgtatatttcaggtccttactgtttttcaggtttgtttctgtttcatgGAGCACATTTGTCCTTTTTATATTTTGCAGAATTATCTAAATAGCCATGActtggtgtttgttttttacaggtTTTATGTTCACTTCTGTGTACTGTACCTTTTACTTTGTCTCACATGTGTTACTTGTCTGTTTTGGTTGGGAATACGTAGTGTTTTTTCAGTTCCACAGGTTATTTGTGGTGGAGGCAGGCTGAGAGTTGTGTGAAAGaggagtacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagtagcactTTGAGGTTCCACCCGTTTGGTGGATCCTGGTTGTGATGGATGTCTGTTTTCACCACCACAAATAATGTATGAGGAAACACTAGCATTTACACAATGTGCTTTGAAGTGAAAAGGGACATCACTCCTCCTAACTAATATTTGCATGCTTTATTTATAATTGATAATTGTTTTCATTGGCAGCTGTTGAATCATACTTTCcatttcatttgaaatgtttGGATTGATATTTCGGTTTTGATTTCAGTAGCCTCAGTACGGTCCgcacaaatgcaaatcaggccAATCAGCCTCTAGAGATTCAGTTACATTTCAATTGGCCTAGGCTTTTGTTTTAATTCCAAATGACTTTGACGTTGTCAGATTTTTCCATTATTCGTTTTCGTTATGACTACATTCATTCACTTTGAATAGCAACTTCTGCTACATAGAAAACCTTTTTGGTCTGCTCTTCAAATATACTGCATATCATTATTAATGGCCTTTGGATGTTTAAGACTTTTTCCAAATCATTTCAGCAAATGATCAGCTTTGTGTAAGCAGCGTTACATTAATGTCATTTTTCTACAGGTCTAAAAGATGTAGAACAGTTAACTAAGAGATGTATTTTAACATATATAATCAAAAATAAAGTTAATGACTCCTGT
>XM_039812436.1
GGGGCTAAGAGCAACTGTGTCCACTCGGTTTATTGGTCAGGCTTTTGGACTCCCAACGACGAGGGCATCGTCTTTTTTGTACATCTCACTTCCGTGTTTGCGCTATCCTAACGAAATACTTAATCTTtttcataaaacataaaaataatcaAgtGTTGCCTGCCTAAGATGGCTATGGTAAAGAGTGGTTGGCTCCATCGACAAAGTACCATACTGCGTCGGTGGAAAAGAAACTGGTTTGATTTGTGGGCTGATGGACGGCTCGTGTTCTATAATAATCAGCAACGGCGTGACATGGAGGATGACATCCACATGAGGGTCGACTGCATTAACATCCGCAACGCTGTTGCATGTCAAGAGCTGAACCCTCCAGAGGGGAAGATGCGTGATGCCTTGCTTCAGATAGTGTGCAGAGATGGACGGGTCATCAGCCTGTGTGCAGACAGCGCAGACGATGCTCTGGCATGGACCATGGCACTTCAGGATGCCAGAATTAATGCGgtGGTCGCTACACCTCAGATCGGCTTTGCACAGGAAGTGATAGCATCTGCTCCTCCCCCCTACTCAGAATATGCTCCACCACCTCAGGGTTATGCCCTGGGACCGTATGGAGAATATGTTGCACCTCCGCCACATGCTACACAGATTGTTTACTCTGCTGATGGGCAGCCCTACGCTTATCCTTATCACTACCAAGgTGGGTACACCACTCCTGGAGTGAACCATGTTGTTATTCAACGCCAGCATGAAGACCGAGGAGATGTGGCTTTGGGCATGCTCGCTGGAGCAGCAACTGGTTTGGCACTtggctctctcttctctgtcttctGATGTCTTCATTAATGTACATTTAGTAGCATATACTCCCTATgtgttctacacacacacacacacagtaaatacTGTTAGCACTTTCTCATATGCCCTGTGTGGCAGTTTCCCATCCCCTTTGTGTTGAATGAATATCTCAATATGAATGTTCTTAACCAAAAAGTACAACAATTACTCACTTTTCAAGAGTTATTTAAATGACAGGAAATAAATTACTCCttttgtgtactgtatatttcaggtccttactgtttttcaggtttgtttctgtttcatgGAGCACATTTGTCCTTTTTATATTTTGCAGAATTATCTAAATAGCCATGActtggtgtttgttttttacaggtTTTATGTTCACTTCTGTGTACTGTACCTTTTACTTTGTCTCACATGTGTTACTTGTCTGTTTTGGTTGGGAATACGTAGTGTTTTTTCAGTTCCACAGGTTATTTGTGGTGGAGGCAGGCTGAGAGTTGTGTGAAAGaggagtacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagtagcactTTGAGGTTCCACCCGTTTGGTGGATCCTGGTTGTGATGGATGTCTGTTTTCACCACCACAAATAATGTATGAGGAAACACTAGCATTTACACAATGTGCTTTGAAGTGAAAAGGGACATCACTCCTCCTAACTAATATTTGCATGCTTTATTTATAATTGATAATTGTTTTCATTGGCAGCTGTTGAATCATACTTTCcatttcatttgaaatgtttGGATTGATATTTCGGTTTTGATTTCAGTAGCCTCAGTACGGTCCgcacaaatgcaaatcaggccAATCAGCCTCTAGAGATTCAGTTACATTTCAATTGGCCTAGGCTTTTGTTTTAATTCCAAATGACTTTGACGTTGTCAGATTTTTCCATTATTCGTTTTCGTTATGACTACATTCATTCACTTTGAATAGCAACTTCTGCTACATAGAAAACCTTTTTGGTCTGCTCTTCAAATATACTGCATATCATTATTAATGGCCTTTGGATGTTTAAGACTTTTTCCAAATCATTTCAGCAAATGATCAGCTTTGTGTAAGCAGCGTTACATTAATGTCATTTTTCTACAGGTCTAAAAGATGTAGAACAGTTAACTAAGAGATGTATTTTAACATATATAATCAAAAATAAAGTTAATGACTCCTGT
>XM_039812437.1
CGCGGGCGGGGCTAAGAGCAACTGTGTCCACTCGGTTTATTGGTCAGGCTTTTGGACTCCCAACGACGAGGGCATCGTCTTTTTTGTACATCTCACTTCCGTGTTTGCGCTATCCTAACGAAATACTTAATCTTtttcataaaacataaaaataatcaAgtGTTGCCTGCCTAAGATGGCTATGGTAAAGAGTGGTTGGCTCCATCGACAAAGTACCATACTGCGTCGGTGGAAAAGAAACTGGTTTGATTTGTGGGCTGATGGACGGCTCGTGTTCTATAATAATCAGCAACGGCGTGACATGGAGGATGACATCCACATGAGGGTCGACTGCATTAACATCCGCAACGCTGTTGCATGTCAAGAGCTGAACCCTCCAGAGGGGAAGATGCGTGATGCCTTGCTTCAGATAGTGTGCAGAGATGGACGGGTCATCAGCCTGTGTGCAGACAGCGCAGACGATGCTCTGGCATGGACCATGGCACTTCAGGATGCCAGAATTAATGCGGGTTATGCCCTGGGACCGTATGGAGAATATGTTGCACCTCCGCCACATGCTACACAGATTGTTTACTCTGCTGATGGGCAGCCCTACGCTTATCCTTATCACTACCAAGgTGGGTACACCACTCCTGGAGTGAACCATGTTGTTATTCAACGCCAGCATGAAGACCGAGGAGATGTGGCTTTGGGCATGCTCGCTGGAGCAGCAACTGGTTTGGCACTtggctctctcttctctgtcttctGATGTCTTCATTAATGTACATTTAGTAGCATATACTCCCTATgtgttctacacacacacacacacagtaaatacTGTTAGCACTTTCTCATATGCCCTGTGTGGCAGTTTCCCATCCCCTTTGTGTTGAATGAATATCTCAATATGAATGTTCTTAACCAAAAAGTACAACAATTACTCACTTTTCAAGAGTTATTTAAATGACAGGAAATAAATTACTCCttttgtgtactgtatatttcaggtccttactgtttttcaggtttgtttctgtttcatgGAGCACATTTGTCCTTTTTATATTTTGCAGAATTATCTAAATAGCCATGActtggtgtttgttttttacaggtTTTATGTTCACTTCTGTGTACTGTACCTTTTACTTTGTCTCACATGTGTTACTTGTCTGTTTTGGTTGGGAATACGTAGTGTTTTTTCAGTTCCACAGGTTATTTGTGGTGGAGGCAGGCTGAGAGTTGTGTGAAAGaggagtacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagtagcactTTGAGGTTCCACCCGTTTGGTGGATCCTGGTTGTGATGGATGTCTGTTTTCACCACCACAAATAATGTATGAGGAAACACTAGCATTTACACAATGTGCTTTGAAGTGAAAAGGGACATCACTCCTCCTAACTAATATTTGCATGCTTTATTTATAATTGATAATTGTTTTCATTGGCAGCTGTTGAATCATACTTTCcatttcatttgaaatgtttGGATTGATATTTCGGTTTTGATTTCAGTAGCCTCAGTACGGTCCgcacaaatgcaaatcaggccAATCAGCCTCTAGAGATTCAGTTACATTTCAATTGGCCTAGGCTTTTGTTTTAATTCCAAATGACTTTGACGTTGTCAGATTTTTCCATTATTCGTTTTCGTTATGACTACATTCATTCACTTTGAATAGCAACTTCTGCTACATAGAAAACCTTTTTGGTCTGCTCTTCAAATATACTGCATATCATTATTAATGGCCTTTGGATGTTTAAGACTTTTTCCAAATCATTTCAGCAAATGATCAGCTTTGTGTAAGCAGCGTTACATTAATGTCATTTTTCTACAGGTCTAAAAGATGTAGAACAGTTAACTAAGAGATGTATTTTAACATATATAATCAAAAATAAAGTTAATGACTCCTGT

Function

symbol description
plekhb2 Predicted to be involved in regulation of cell differentiation. Predicted to be integral component of membrane. Orthologous to human PLEKHB2 (pleckstrin homology domain containing B2).

NR:

description
PREDICTED: pleckstrin homology domain-containing family B member 2

GO: NA

KEGG:

id description
K23857 PLEKHB; pleckstrin homology domain-containing family B

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039812435.1 True 2084 mRNA 0.42 8 37843729 37849600
XM_039812436.1 False 2077 mRNA 0.42 8 37843733 37849600
XM_039812437.1 False 1997 mRNA 0.41 7 37843726 37849600

Neighbor

gene id symbol gene type direction distance location
cep19 cep19,LOC102796355 coding upstream 5621 37836407 ~ 37838105 (+)
aqp12 LOC104962685,LOC103357409 coding upstream 27381 37814617 ~ 37816345 (+)
si:ch211-121a2.4 LOC100711177,LOC104919118,LOC102794329 coding upstream 46777 37793281 ~ 37796949 (+)
dhcr24 dhcr24,LOC102794897 coding upstream 52102 37782584 ~ 37791624 (+)
usp24 usp24 coding upstream 93531 37699054 ~ 37750195 (+)
LOC120566157 plekhb2 coding downstream 473 37850073 ~ 37854359 (+)
cts12 LOC104962698,LOC103357414 coding downstream 34275 37883875 ~ 37889889 (+)
lama3 NA coding downstream 40692 37890292 ~ 37915047 (+)
impact hrh4,impact,LOC100712525,LOC102292561,LOC101478323,LOC102218847,LOC105928845,LOC103137092,LOC103376683 coding downstream 101558 37951158 ~ 37990276 (+)
LOC120565667 hrh4,LOC104967234,LOC100712525,LOC102292561,LOC101478323 coding downstream 133734 37983334 ~ 37984742 (+)
G100956 NA non-coding upstream 4195 37838902 ~ 37839531 (+)
G100940 NA non-coding upstream 25969 37817373 ~ 37817757 (+)
G100938 NA non-coding upstream 29686 37813783 ~ 37814040 (+)
LOC120565000 NA non-coding upstream 30316 37809268 ~ 37813410 (+)
G100926 NA non-coding upstream 76950 37766191 ~ 37766776 (+)
G100963 NA non-coding downstream 21856 37871456 ~ 37873735 (+)
G100978 NA non-coding downstream 107004 37956604 ~ 37973191 (+)
G101066 LOC108281047 non-coding downstream 148855 37998455 ~ 37998703 (+)
LOC120565003 NA non-coding downstream 163589 38013189 ~ 38015274 (+)
G101080 NA non-coding downstream 196444 38046044 ~ 38046823 (+)
G100843 NA other upstream 353654 37463914 ~ 37490072 (+)
prrc2c NA other upstream 885366 36932655 ~ 36958360 (+)
G100671 NA other upstream 1144857 36695437 ~ 36698869 (+)
sass6 sass6,LOC102776185 other upstream 1231980 36596041 ~ 36611746 (+)
smim24 NA other upstream 1309144 36495484 ~ 36534582 (+)
usp46 usp46 other downstream 1016835 38866435 ~ 38880605 (+)
prdm5 prdm5 other downstream 1473984 39323584 ~ 39361733 (+)
LOC120565708 LOC103369944,LOC100698021,LOC101482931,LOC102791229,LOC102291415,LOC102212992 other downstream 1604520 39454120 ~ 39464450 (+)
reps2 reps2,LOC102792668 other downstream 1711461 39561061 ~ 39592762 (+)
LOC120565298 cdkl5,LOC103356958 other downstream 1844312 39693912 ~ 39740277 (+)

Expression


Co-expression Network