s1pr3a (LOC104942240,LOC103398206)


Basic Information

Item Value
gene id s1pr3a
gene name LOC104942240,LOC103398206
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 24133664 ~ 24137514 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039812449.1
ggagagagcgGCTCGGTCCGAGCTGGAGGGAGTCCCAGTGTGGAGAGGACGCCACACCGATGAAGTTCAGGACGCAACACTAAGTGGATGTTTTGAGGCAAATACTTCCGCGATTGGAAACTTTTATACGGGCGAGGACAAAGTATGGACTTTGACTTCACGTCGAAGATCATCCATTTTTTGGCAATCACGTATTTTTGCACGAGCGCATCGTTACGCAGGAGAGAATCTTACCTTCCAAGTAGCTGCAAATCTCGCCACACCGGGGATGTAGATGAGACCAGAAACTCCAACAGGTCCTTCAGGAGGCTCTAAATAAGTTTGAGCTCCTCTGCATTTGATTGGCAGGTCCTTCAGGAGGCTCTAAGATGCCAGTTGTGACCCTGCCTGGCTGAGCAGCCTCGCCACCTTCTGCTGTCCAGTGCTGTGGCGCCCTCTGCTGTGTGACCCGAGGAAGGCCAGACGGGGCAGGCAGTATGGGGAACATACTGGAGGAGGGGATGAACACTGTCATCGTCAACCACTACAACCACTCAGGGAAGTGGGACCGGCCTCGCAGCAACGGGGCCTGTAAGATGGCCGTGCTGCTCTTCATCTGCGTGCTGATTGTTCTGGAGAACGTTACGGTCCTGCTCGCTCTCTGGAGGAACAAGCGCTTCCACAGCCGTATGTACTTCCTCATTGGAAACCTGGCGCTGTCAGACCTGCTGGCTGGTGTGGCCTACGTGGTCAACATCTTTACCTCAGGAGACAACACCTACTTCCTGACACCAGTGCAGTGGCTGGCCAGAGAAGGGAGCATGTTTGTGGCCCTCAGTGCATCCACGTTCAGCCTCCTGGCCATTGGGATCGAGAGGCACATGACTATGGTGCGTTTGCGTCCGTGTGAGACAGCAGGTCGGGGGAGACTTCTAGGACTGCTGGCAGCCTGCTGGCTTGTGTCAGTGCTGCTCAGTGCCCTGCCCAGCCTGGGCTGGAACTGCCTGGACAATATGGCCTCCTGCTCCACAGTGTTGCCGCTCTACGCTAAGAGTTATGTGGCCTTCTGCATCAGTGTGTTCAGCGCCCTGTTGGTGGCCATTATCATCCTCTACATCAGGATCTACCGCCTGGTGACCTCTAGCGGCCGCAGGGTGAGCAGCCGGCCTTCAGAGCGCTCACTGGCTTTATTGCGGACAGTGGTTATTGTTCTTGGAGTGTTTGTCATGTGCTGGACccccctcttcctcctgctgctgctggatgtTGGTTGCAGCCCAGATAAGTGCCCTGTGCTCTACCAGGTGGACTGGTTTATAGCCCTGGCTGTGCTTAATTCTGCCCTCAATCCTCTGATATACACTCTGTCCAGCAGGGAGATGAGGGCGGCTTTCTTTAGGCTGCTGTGCTGCTGTCAGACCAGCATGGACAACACTGGGACTCCTGTGGTGGGCAACCCCCACCTGGGCACAGTCATACCCACAGCGGAGAACAGCAAAACCAGTGGAGGAGTGGGCAGTGGGGctggcaagtccacactgaACAGAGGGAAGGTTCCCACACCTATCAACTCTGACAAGCATGGAGATCCCTCAGCCACTGCTGTGCCCCATCCCTCTGGACCTGCAGACCTGCTCTCAGCTGTGCTGGTGAAGGCGGGGGCGCTGCCGCCCCTCGGCAAGTTCTGAATGAAAGCACCTTAAAGAGGCCTAACAGTGGCACAGAAGTAAACATAGAACTGAACAGTCTCGCTATCGGCCACTTTTTGTTTATGCACTGTGGATAGGATGAAGTAATGTTGGAACCACATAAATGCAGATTGAAGTACAATCAGTCATTTAAAGCCACTATTTACAACAACTCAATATTATTACAACACCAGAGTAAATTATATGTTTGTCTTACACAATGATTAATGTTCAATATTTCACAGTTCAAAACTATGAAATACAATAGGACAGTTTCACGGACATGGATTAAACCGAGGCCCAAATGAAATCTCTTGTCTTAATTCATGTCTGGGAAACTAGTCTTGGTAATGCTTAAAAAACAACAGAGTATAATTAACTTTATTAGTTTTGTGTCTGTCGAGGTGTTTATTTTACTGTGTCATTACAAGCAGAAGGATCAGATTAGGGAACTTTTATTGCATGTGCTATATGCAAGTACTCTTAAAACACCTGCAATTTCCATCACAACTTTGCTTGGTAAACTATTTATTTTCTGTGAAAACATTTGCCATCTTAATACTATTGGTATACTTGTTTGGTATACTTAGTGTGCATACAAAACCATCATGGTACTAGGACTTAATTATTaattttgttatgatttgagaTGCActgtgagagaaaactagaccaAATATTTGTGAGACTAGCGGCCTCATGAGGCTGTGATGCTCAATACACACCAGAAGACAAAAGTGTGGGAATCATTAAAAATGGAGGGACAGAATTGCTACAGAATTGCTATTATTAAATTTGTGCCAATAGTGGGCAAGAGTGAAAACAATTTGCCCTGACGGTGGTTTTACAGTAAAAGCAATGTAAAATGTATAATCTAATTAGTAGGGTTCAACTTCTGTACAGTGGCCATTTTTGGCCATTTCTGGCTCAGCTCTACATTACCAGACCTGTCTCACTTTTCATTGGTCTATTCCGTCAGTATCAGCTGAATTAGTGTAGATAATAACTACACTCATTTTTGCTTCTCATCAGCCCATCTAGAAACCACTCACACATCAACTAACCACTAGTGAATATGAGTGTTGGATGTGAATTATTTAATGATGGTAGACTGTAAATGACATTTCTGTCTATAGGGTGGTGTAGTGCCTGATACCATTATATagcaaataaaattaaattctATTCActtttatgaga
>XM_039812450.1
ggagagagcgGCTCGGTCCGAGCTGGAGGGAGTCCCAGTGTGGAGAGGACGCCACACCGATGAAGTTCAGGACGCAACACTAAGTGGATGTTTTGAGGCAAATACTTCCGCGATTGGAAACTTTTATACGGGCGAGGACAAAGTATGGACTTTGACTTCACGTCGAAGATCATCCATTTTTTGGCAATCACGTATTTTTGCACGAGCGCATCGTTACGCAGGAGAGAATCTTACCTTCCAAGTAGCTGCAAATCTCGCCACACCGGGGATGTAGATGAGACCAGAAACTCCAACAGGTCCTTCAGGAGGCTCTAAGATGCCAGTTGTGACCCTGCCTGGCTGAGCAGCCTCGCCACCTTCTGCTGTCCAGTGCTGTGGCGCCCTCTGCTGTGTGACCCGAGGAAGGCCAGACGGGGCAGGCAGTATGGGGAACATACTGGAGGAGGGGATGAACACTGTCATCGTCAACCACTACAACCACTCAGGGAAGTGGGACCGGCCTCGCAGCAACGGGGCCTGTAAGATGGCCGTGCTGCTCTTCATCTGCGTGCTGATTGTTCTGGAGAACGTTACGGTCCTGCTCGCTCTCTGGAGGAACAAGCGCTTCCACAGCCGTATGTACTTCCTCATTGGAAACCTGGCGCTGTCAGACCTGCTGGCTGGTGTGGCCTACGTGGTCAACATCTTTACCTCAGGAGACAACACCTACTTCCTGACACCAGTGCAGTGGCTGGCCAGAGAAGGGAGCATGTTTGTGGCCCTCAGTGCATCCACGTTCAGCCTCCTGGCCATTGGGATCGAGAGGCACATGACTATGGTGCGTTTGCGTCCGTGTGAGACAGCAGGTCGGGGGAGACTTCTAGGACTGCTGGCAGCCTGCTGGCTTGTGTCAGTGCTGCTCAGTGCCCTGCCCAGCCTGGGCTGGAACTGCCTGGACAATATGGCCTCCTGCTCCACAGTGTTGCCGCTCTACGCTAAGAGTTATGTGGCCTTCTGCATCAGTGTGTTCAGCGCCCTGTTGGTGGCCATTATCATCCTCTACATCAGGATCTACCGCCTGGTGACCTCTAGCGGCCGCAGGGTGAGCAGCCGGCCTTCAGAGCGCTCACTGGCTTTATTGCGGACAGTGGTTATTGTTCTTGGAGTGTTTGTCATGTGCTGGACccccctcttcctcctgctgctgctggatgtTGGTTGCAGCCCAGATAAGTGCCCTGTGCTCTACCAGGTGGACTGGTTTATAGCCCTGGCTGTGCTTAATTCTGCCCTCAATCCTCTGATATACACTCTGTCCAGCAGGGAGATGAGGGCGGCTTTCTTTAGGCTGCTGTGCTGCTGTCAGACCAGCATGGACAACACTGGGACTCCTGTGGTGGGCAACCCCCACCTGGGCACAGTCATACCCACAGCGGAGAACAGCAAAACCAGTGGAGGAGTGGGCAGTGGGGctggcaagtccacactgaACAGAGGGAAGGTTCCCACACCTATCAACTCTGACAAGCATGGAGATCCCTCAGCCACTGCTGTGCCCCATCCCTCTGGACCTGCAGACCTGCTCTCAGCTGTGCTGGTGAAGGCGGGGGCGCTGCCGCCCCTCGGCAAGTTCTGAATGAAAGCACCTTAAAGAGGCCTAACAGTGGCACAGAAGTAAACATAGAACTGAACAGTCTCGCTATCGGCCACTTTTTGTTTATGCACTGTGGATAGGATGAAGTAATGTTGGAACCACATAAATGCAGATTGAAGTACAATCAGTCATTTAAAGCCACTATTTACAACAACTCAATATTATTACAACACCAGAGTAAATTATATGTTTGTCTTACACAATGATTAATGTTCAATATTTCACAGTTCAAAACTATGAAATACAATAGGACAGTTTCACGGACATGGATTAAACCGAGGCCCAAATGAAATCTCTTGTCTTAATTCATGTCTGGGAAACTAGTCTTGGTAATGCTTAAAAAACAACAGAGTATAATTAACTTTATTAGTTTTGTGTCTGTCGAGGTGTTTATTTTACTGTGTCATTACAAGCAGAAGGATCAGATTAGGGAACTTTTATTGCATGTGCTATATGCAAGTACTCTTAAAACACCTGCAATTTCCATCACAACTTTGCTTGGTAAACTATTTATTTTCTGTGAAAACATTTGCCATCTTAATACTATTGGTATACTTGTTTGGTATACTTAGTGTGCATACAAAACCATCATGGTACTAGGACTTAATTATTaattttgttatgatttgagaTGCActgtgagagaaaactagaccaAATATTTGTGAGACTAGCGGCCTCATGAGGCTGTGATGCTCAATACACACCAGAAGACAAAAGTGTGGGAATCATTAAAAATGGAGGGACAGAATTGCTACAGAATTGCTATTATTAAATTTGTGCCAATAGTGGGCAAGAGTGAAAACAATTTGCCCTGACGGTGGTTTTACAGTAAAAGCAATGTAAAATGTATAATCTAATTAGTAGGGTTCAACTTCTGTACAGTGGCCATTTTTGGCCATTTCTGGCTCAGCTCTACATTACCAGACCTGTCTCACTTTTCATTGGTCTATTCCGTCAGTATCAGCTGAATTAGTGTAGATAATAACTACACTCATTTTTGCTTCTCATCAGCCCATCTAGAAACCACTCACACATCAACTAACCACTAGTGAATATGAGTGTTGGATGTGAATTATTTAATGATGGTAGACTGTAAATGACATTTCTGTCTATAGGGTGGTGTAGTGCCTGATACCATTATATagcaaataaaattaaattctATTCActtttatgaga

Function

NR:

description
PREDICTED: sphingosine 1-phosphate receptor 3-like

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0016021 integral component of membrane cellular_component
GO:0038036 sphingosine-1-phosphate receptor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039812449.1 True 2867 mRNA 0.48 2 24133664 24137514
XM_039812450.1 False 2815 mRNA 0.48 2 24133664 24137514

Neighbor

gene id symbol gene type direction distance location
tle2b LOC103463550,LOC105936873,LOC103142606,LOC108230720,LOC101484064,LOC102310211,LOC101064354 coding upstream 135280 23913948 ~ 23998384 (+)
tle5 aes,LOC108430095 coding upstream 253498 23836670 ~ 23880166 (+)
LOC120565386 LOC104923650,LOC102308979,LOC100710383,LOC103369973,LOC102790487 coding upstream 298010 23790086 ~ 23835654 (+)
LOC120564946 c2cd4c coding upstream 467380 23659619 ~ 23666284 (+)
ap3d1 ap3d1 coding upstream 505917 23600316 ~ 23627747 (+)
ankrd24 ankrd24,LOC106918341,LOC106947862,LOC102780339,LOC103142601 coding downstream 30844 24168358 ~ 24183028 (+)
foxe3 foxe3,LOC104952243,LOC102794361 coding downstream 140882 24278396 ~ 24281064 (+)
foxd2 LOC104918470,LOC103372816,LOC100707784 coding downstream 149590 24287104 ~ 24288689 (+)
scyl3 scyl3 coding downstream 344189 24481703 ~ 24488751 (+)
sele NA coding downstream 377920 24515434 ~ 24519540 (+)
G97728 NA non-coding upstream 42345 24090543 ~ 24091319 (+)
G97702 NA non-coding upstream 133442 23998401 ~ 24000222 (+)
G97679 NA non-coding upstream 420201 23712097 ~ 23713463 (+)
G97657 NA non-coding upstream 428380 23704936 ~ 23705284 (+)
G97615 NA non-coding upstream 631086 23500976 ~ 23502578 (+)
G97788 odf3l2,LOC104949085 non-coding downstream 70715 24208229 ~ 24209290 (+)
G97789 NA non-coding downstream 74346 24211860 ~ 24213859 (+)
G97807 sac3d1 non-coding downstream 116956 24254470 ~ 24256081 (+)
LOC120565067 NA non-coding downstream 172095 24309609 ~ 24365175 (+)
G97896 LOC104918463,LOC104952282 non-coding downstream 374457 24511971 ~ 24513033 (+)
cdc34a cdc34,LOC103368917,LOC104923648,LOC103397164,LOC107393183,LOC103156874 other upstream 483151 23631119 ~ 23650513 (+)
G97596 lpl,LOC108280930,LOC105906969 other upstream 655846 23474782 ~ 23477818 (+)
LOC120565078 LOC104955513,LOC104923635,LOC103365215,LOC100690174 other upstream 753289 23378731 ~ 23380375 (+)
pole4 NA other upstream 810180 23321464 ~ 23323484 (+)
LOC120565086 NA other upstream 829973 23300806 ~ 23303691 (+)
cks2 LOC104918474,LOC108230759,LOC102216377,LOC104949087,LOC105011584 other downstream 66827 24204341 ~ 24208141 (+)
LOC120565649 LOC103373964,LOC107081966 other downstream 611503 24749017 ~ 24765225 (+)
G98012 dmbx1,LOC103373966,LOC108230579 other downstream 644404 24781918 ~ 24783881 (+)
elovl1b LOC106963699,LOC101078639 other downstream 714773 24852287 ~ 24873916 (+)
G98194 NA other downstream 1395311 25532825 ~ 25547089 (+)

Expression


Co-expression Network