usp13


Basic Information

Item Value
gene id usp13
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 20825520 ~ 20867988 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039812461.1
ACAGTAGCGATGTCATTTCTGCGCAGGTCAAAGCTTtttagcaaaaaaagaaaacagccaaAAGACCAACATTAGCCTTCATGCTCTTCGCTTTGCCGCATGTGTTGCAACCAGCCTCCAccccttttatttttatgtttttcagcGTCACATCCCCCTGGCCGGAGGAATGTAGAGACagagtgttttaaaaatagcatcCTCCTCTGACAGCGCTGCTCCGCTggctccgcagcactgtggtgCGAGAAGCAGGAATGCGAAGATGGCTGCAGACCTCGGAGAGCTGCTGGTCCCATACATGCCCACCATCAGAGTCCCCAAAACAGGAGACAGGGTTTTCAAGAGCGAGTGCGCCTTTTCCTTCGACTCTCCAGAGTCAGAGGGAggcctgtatgtgtgtatgaacaCATTCCTGGGCTTTGGACGGGAACATGTGGAGAGACATTATCGCAAAACAGGACAGAGCGTTTACATGCACCTCAAACGACATGTCAAAGAGAAAGCCACAGGAGCTGCAGGAGGCGCCATCCCCAGACGAAGAAATGGAAAAGTGTTTCTAGATTTAGAGCTAAACCGTGATTTTAACGGAGAGGACTATGAATATGAAGACGAGGTCAAGCTTGTCATTTTTCCAGACCACTTCGAGATCCCCTTACCAAATATTGAGGAGTTGCCTGCTCTGGTGACCATCGCCTGTGACGCAGTGCTCAATGCACCATCAGCTTACAAGAAGCAGGAGCTTGAATCCTGGGAGGAGGAGATCCAGGTGTCCAGACATGCCAGGAGCCTCAGACAGCTGGATAATGGGGTCAGGATCCCACCCAGTGGCTGGAAGTGTCAAAAGTGTGAGATGAGAGAAAACCTGTGGCTGAACCTGACAGATGGAGCAGTGCTCTGTGGGAAGTGGTTCTTTGATGGGAGCGGAGGCAACGGCCATGCTCTGGAACACTACAAAGAGACCAAATACCCCCTGGCTGTAAAACTGGACACCATCACCCCTGACGGAGCAGATGTCTACTCATTTGAGGAGGAGGAAGCTGTGTTGGACCCCCACATATCAGAACACTTGTCACACTTTGGAATAGACATGCTACAGATGCAGAAAAGAACAGAGAATGGTCACCACACAGACAATAACTCCCGGCCGCGGGTCAGTGAATGGGAGGTGATCCAGGAGTCGGGCATGAAGCTGAAAGCGGTGTTTGGTTCTGGTTACACAGGCATCAAAAACCTGGGGAACAGCTGCTACCTCGGCACAGTCCTACAGGTCCTCTTCAGCATCCCAGACTTTCAGAGGATGTATGTTGGTAATCTTCAGAGAATATTTGACTATTCACCCCTTGACCCCAGCCAGGACTTCGCCACACAAATGGCTAAACTGGGACATGGACTGCTCTCAGGCCAGTACTCCAAACCACCCATGAAATCTGAGGTCATTGAACAGGTGATGAAAGAAGAATACAAGCACCAGCAGAAGGGCGTCTCTCCCCGGATGTTGAAGGCCCTGGTCAGCAGGGGACACCCAGAGTTCTCCTCTAACAGACAACAAGATGCCCACGAGTTCTTTCTGCACATCCTAAATGTGGTGGAGAGGAACAGTGCAGGCTCGGAAAATCCAAGCGATGTCTTCCGCTTCCTGGTGGAGGAGCGAGTTCAGTGCTGCCAGACACGTCGGGTTCGTTACACTCAGCGGGTGGACTACTGCATCCAGCTGCCAGCTCCCATTGAGGCGGCCACTAATCGAGAGGAGCTGCTGGCATATGAGGCTAAGCGGAGGGATGCTGAGGAGAACATGCGGGCTCCTCCTGAGCCAGTTAGAGCACGGATCCCCTTCACCGCCTGCCTGCAGGCCTTCACCGAGCCGGAGAACGTCCCTGACTTCTGGAGCTCAGCGCTGCAGGCAAAGTCAGCCGGAATCAAAACTTCCCGTTTTGCCTCCTTCCCAGAGTATCTGGTTTTGCAGataaaaaaattcacatttggGGTTGACTGGGTGCCAAAGAAACTAGACTTGGCCATAGATGTTCCAGACTTTCTGGATCTCAGCCGGCTGCGGGCCACTGGGCTGCAGGCGAGTGAAGAGGAGCTGCCTGACCTTATGCCTCCCATCGTGCTACCTGAAGACACCAGAGATAACTCCATGGGCTCCATGGACTCTCCAGAAATAGACGAGGCGGCAGTAATGCAGCTGGCGGAGATGGGCTTTCCGCTGGAGGCCTGTAGGAAGGCCGTCTACTACACAGGCAACATGGGCCCAGAGATGGCCTTCAACTGGATCATAGCACACATGGAGGAGCCTGACTTTGCAGAACCTCTCACTCTGCCCTCCATGATGGATCCGGGTCCCTCCACCAGCGACAGCCCCATGGGCGCAACCCTGCTGGGCAACTCGCCCCCCGAGGAGAGCATCGCCATCCTCACTTCAATGGGCTTCCCCCGCGCTCACAGCATCCAGGCACTTAAAGCCACGAACAACAACCTCGAACGAGCACTCGACTGGATCTTCACCCAcccagaggaggaggagagtgaCGCCCTTTCAGACATGGCCGACACGGAGCCCAACGGCAACGCTTTCTCCAACGCCAACTCACACAGCGACTCCACACTGTCCCCAGACAGAGACGCGTCGGGCCCGCGGGTCAAAGACGGACCGGGACGTTATGAGCTCTTTGCTTTCATCAGTCACATGGGAGCATCCACCATGTCAGGACATTATGTCTGTCACATCAAAAAGGAGGGAAGgtgggtgatCTACAACGACCACAAAGTGTGTTTGTCAGAAAGGCCTCCAAAAGACTTGGGCTACATCTACTTTTACCATCGACTGTCTAGCAGTTAAACTGAAGtacccctctccccctccccccttccaCAATGCAACCTTTTTAAAGAACCGCAGTCTTTCACCCTGAAGACTGGCAGACAACTTTAATAACAGCCACAGTGAAAACGATGGAAATAACCTCTCAGACCAGCTGCTCGCCTTAATATGATGTCATTCAGGAGCAACCAGGAAACGTGGTCAGAAAAGGAAAGcaatgtgcatttgtgtgcatttgtgttatgttatgctttaaatgtatattttggGGTTTATGTCTAAGAAAAGACATTTTCTTGACCGTGTAGGTGCAGAGGGATGTGTGCAATTTCCACTAAACAAAATTTCAATATCAAATCTTATTGTTCCTCCTTTATGCCTTCAGCTACTGTGCCAGTATTTTCAAAGTGGtacattttataaatgtatattgAAATGGCTTCACTGCCGGCCCTGAAATGCTCTGAAACTGCAACAACAAACAAGAAATCCCTGCTGCTCGTGGCTttgtattttactttgaaatacAAAAGAATGTTTTTTCATCCCCGGGAAATTGAAAGGACATTAAGAATTAAAATGTTTTGGGTGGTCACCAAGATAATTaacaacatatactgtatgttcagaCTATAGGGGAGCACCAAGAAGGCCATGAACAGGCGTTAACTAGACTGTAGTTAAAAATACAGTATTACAGGTTGAATAATGGCTCAAACCTGCTCCAGTTCTACCCGGAGACGACATGCAAGTTTGTCCCTTTTTAATGAGAAACTTTCTGACGTAAACCAGCTGAGTTACAGTATCAAGATAGACGTATTTTCCTTCCCTGAAAGCACCTTTTGATTAAATCAAGTTTAAATTTTGCAGCTGATGCAGTTGAAGTGGACTTTTTATTTACCAGCTATAAGCAGTTGAATGTGTCAACTTCAGTACTGCTGACCATGTAAGTCCTTGAAGTAACCATTAGTCTATGAAGGAGATGACAGCATTGCATATAATTGACGTCTAATATAAGCAACTCTGTGCTCATTCTAATATTTATCAAATCATAAGTGCACTGAACTTCTTCGTTCTCCTTTTGTCCATATTACAACATATTTTCGTAGTTGGCAAAACTTCAACTCTCAGCTGCAGCCGGTGCAGTTTagctcctttctctctctgataGATTTAGACTGTGACCCAAAACCTTAAAATGAATGTTTTCCTTCACCTGTTGCCACTTTTTAACAGGTCAGTTAATTCATTTATGCATCTGAACTGTTTTCACGAGTAAAGCAATATATGCAACTACAACCAAATCTACTCATGAACCTACTGTATGATGAAAAGCTGTACAGTGACCTGCATCTCTTGTACTAACAGACGTGGTGCAGTGCTGAATGTATAACTCCATGGTGCTAACTGCAACCAAAACCTCCTGTTCAGTTTGAATACTCCGAAACCACAGTGAACGTAGAACTGGCCCTTAGCTGTTTAGTCACTATAAATAACCTCATGCTGGATTATCCACCAACTCTGTACTCTTCTCGTTTATCTACTCAGTATGTTTGAAATGTGCCAGACAGATTCAGCATGGATATTATTGTGCGTTGTTTGTCAAATATTCGTGAATTTGCAACCTCTGACTGAATCTGGTTTTATCTGTTGCATCCCAAAAAAGGGCAGTGTAATATCACAGTGTTGGTATTTTGTCAGTGGCACAAACACTTAATTCCAGTTTGGTGATCCTGGCATGTGGTGAAACGGTCTTTCACTCAGTGGTGCACTTTTGTGTGCATAACGGGAGTTCCGCTGAAAATAGACTTTCCGAATGTTACGGTATTCTGCAAAAGTCTACACCTTCtttatatttgcattttttttgccGATTTTTGTAGTCATTCCCTTTCATATTCAAGGAGAGGACAATCCTTTGACAATAAACTGACATTTCTTAAGAGGGTTCAAAGAAACAAAAGGAGACATATTTGACTGCATATCTGATTAACATCAATAACTGTAATAAGATTGTCCCTAAAAATGTCTTTCAACAATCTCATGTAATGCTTTTTAAGACAGTCATATGGGTGTTTTTCCTTTAGGGTTAATATCTTTACAGACAAAATTTTTATTACAGATTAAATCCATATTTCAGCGGTGCTCCCCTTTAACAACACTGTGCATGGACTTCCCTGAGCAGAACTTCAGTTTTATTATATCTTGACCTCTCATCTTCATTAGACACTACTTGCTCAACTGCAGCTTCATTGTCTATGCAGCTGGGAATTCTAAAAGGTCTCTCTATGCAAGTCTTGTGTTTCTGCTGTTCTTCCTATAAAAGgtgatttctttttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtcagaaacCACATGTATCCTATCGAACCCTCATCTGTAATCGGTGTTTCCGCTCTTGAACATCAGTGGATGGGGGATAAACTTGTTGTCTTGCTGTTATTGTTAGTTGTTCAGATATTCTGtgcaattcattttatttctctgcgCCTTTTGGGGTTTTGCGCCCCCCCTCCATCTTCTTGTTTACGTTATCGTCtttgtattttgtctttttgtttcagCTCTTCCTCCAGCTCGGTCTCTTCCATTCTTTTTCTCTACGTTGTTAAAACGTTAAAACGGTTCAATTTGTCACAAAAATGCTTTTTCACTGTCAGCATGTGCACTAGACGTTGACATTTAGTCATTTGGATTGTACAATTGTACTTTTGTGAGTTGTATTCTCTTTTTCATTTCACTAAATGTCAACAAAGGTTCTTCACTTCTTTTTACTCTGTTGCCTTTTTTGAAAACAAGCTTGTGCCAATTCTGTAGTTTTCATTACATAGATTTCCTGAAGGGATTATTTTAAGTTGACTTTTGTAATGTATGCATTTATCCAAATGTGGCTTAGGTGTATGTGAATAGAGTCATGACAGTATATGCAGTGGCACTGTTTACTTACAATGTTTGGGTAATTTAATAAACTACACCTTTGTTGAGA

Function

NR:

description
PREDICTED: ubiquitin carboxyl-terminal hydrolase 13-like isoform X1

GO: NA

KEGG:

id description
K11836 USP5_13, UBP14; ubiquitin carboxyl-terminal hydrolase 5/13

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039812461.1 True 5841 mRNA 0.45 22 20825520 20867988

Neighbor

gene id symbol gene type direction distance location
ndufb5 ndufb5 coding upstream 945 20820248 ~ 20824575 (+)
actl6a actl6a coding upstream 8634 20810183 ~ 20816886 (+)
mfn1b mfn1 coding upstream 50707 20756787 ~ 20774813 (+)
LOC120565171 LOC104931934 coding upstream 154369 20669336 ~ 20671151 (+)
LOC120565169 NA coding upstream 162822 20652948 ~ 20662698 (+)
ccdc50a ccdc50 coding downstream 168289 21036277 ~ 21060839 (+)
LOC120564993 LOC104965956 coding downstream 205130 21073118 ~ 21075438 (+)
p3h2 p3h2 coding downstream 211646 21079634 ~ 21146410 (+)
cpox cpox,LOC102782768 coding downstream 284590 21152578 ~ 21157082 (+)
tmem47 tmem47,LOC102234870,LOC103464126 coding downstream 314815 21182803 ~ 21189074 (+)
G96782 NA non-coding upstream 44602 20776558 ~ 20780918 (+)
G96777 NA non-coding upstream 75624 20749212 ~ 20749896 (+)
G96775 NA non-coding upstream 81745 20743067 ~ 20743775 (+)
G96758 NA non-coding upstream 123582 20701439 ~ 20701938 (+)
G96754 ssx2ip non-coding upstream 148783 20674257 ~ 20676737 (+)
G96871 NA non-coding downstream 137743 21005731 ~ 21009310 (+)
G96898 NA non-coding downstream 193684 21061672 ~ 21062304 (+)
G96906 LOC103364786,LOC104920247 non-coding downstream 259075 21127063 ~ 21174307 (+)
G96963 LOC102235645,LOC103464121,LOC107392658,LOC103138531,LOC103371596,LOC106936986,LOC107100776,LOC101155672 non-coding downstream 442924 21310912 ~ 21314520 (+)
G97009 NA non-coding downstream 500130 21368118 ~ 21456800 (+)
prkacba prkacb other upstream 260696 20548999 ~ 20564824 (+)
G96513 NA other upstream 1293843 19530767 ~ 19531677 (+)
G96418 tsc22d2 other upstream 2039884 18782600 ~ 18785636 (+)
nmur1a LOC103368681,LOC104952433 other upstream 2160407 18646703 ~ 18665113 (+)
nppc nppc,LOC104932751,LOC103372810 other upstream 2966109 17855631 ~ 17859411 (+)
LOC120565275 ctxn1,LOC108166259,LOC106954365,LOC103138526,LOC104947303,LOC105353898 other downstream 543348 21411336 ~ 21441558 (+)
lsm7 lsm7,LOC102793261 other downstream 686906 21554894 ~ 21557731 (+)
G97093 NA other downstream 822909 21690897 ~ 21782000 (+)
G97321 NA other downstream 1415658 22283646 ~ 22287272 (+)
LOC120565764 LOC103367403 other downstream 1617523 22485511 ~ 22491235 (+)

Expression


Co-expression Network