ndufb5 (ndufb5)


Basic Information

Item Value
gene id ndufb5
gene name ndufb5
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 20820248 ~ 20824575 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039812465.1
CTCTTGTTGTTTAAACGCCATCCCTCAGAAGACATGGTGGGCATGAGTGTTCTCAGATCTGCTGCTGCTTTTGCAGCCAGACTGAGTCCTCTTAAATCTGGAAATAATGCTGCAAATGTACTCACTCGAGCGATCCAACGGACAGATAAAGTGGCCGTTCGTTGGGGTCATGGAAAGAAAATGTTTGTCATCAAACCCACTGACTTCTATGACAGGAGATTTCTGCGCTTATTGCAATATTACATCCTCCTGACTGGCATTCCTATGGCTGTCATTGTCACATGTGTGAATGTCTTTGCCGGTGAGGCAGAGCTGGCTGAAGCTCCTGAGGACTACGAACCTGAGCACTGGGAGTACTACAAGCACCCCATCACCAGGTGGATTGCACGGAATTTCTATGATTCCCCAGTAAAGGACTATGAAAAGATGATGGCTGCAATCCaaatagagaaagaaaaggcagaCATGAGACTGACACAGCTGGAGGTGCGTCGACAGATGAGGACGAAGGGGGATGGCCCCTGGTTCCAGGTGGGGACCCTCAACAAGGAGCTAATTGACTACAGCCCCAAGGCAACACCTGACAATTAATCCAGACGTGTCTGCCATCAGTACATCATGCCGATCAATCTTACTGTTTGTACATTTTTTCCCTTCTTGCGTAAATAAAGTATCTATATGTACTCTA

Function

symbol description
ndufb5 Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be part of mitochondrial respiratory chain complex I. Orthologous to human NDUFB5 (NADH:ubiquinone oxidoreductase subunit B5).

NR:

description
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, mitochondrial

GO: NA

KEGG:

id description
K03961 NDUFB5; NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 5

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039812465.1 True 688 mRNA 0.47 6 20820248 20824575

Neighbor

gene id symbol gene type direction distance location
actl6a actl6a coding upstream 3362 20810183 ~ 20816886 (+)
mfn1b mfn1 coding upstream 45435 20756787 ~ 20774813 (+)
LOC120565171 LOC104931934 coding upstream 149097 20669336 ~ 20671151 (+)
LOC120565169 NA coding upstream 157550 20652948 ~ 20662698 (+)
vtg2 NA coding upstream 189911 20620595 ~ 20630337 (+)
usp13 NA coding downstream 945 20825520 ~ 20867988 (+)
ccdc50a ccdc50 coding downstream 211702 21036277 ~ 21060839 (+)
LOC120564993 LOC104965956 coding downstream 248543 21073118 ~ 21075438 (+)
p3h2 p3h2 coding downstream 255059 21079634 ~ 21146410 (+)
cpox cpox,LOC102782768 coding downstream 328003 21152578 ~ 21157082 (+)
G96782 NA non-coding upstream 39330 20776558 ~ 20780918 (+)
G96777 NA non-coding upstream 70352 20749212 ~ 20749896 (+)
G96775 NA non-coding upstream 76473 20743067 ~ 20743775 (+)
G96758 NA non-coding upstream 118310 20701439 ~ 20701938 (+)
G96754 ssx2ip non-coding upstream 143511 20674257 ~ 20676737 (+)
G96871 NA non-coding downstream 181156 21005731 ~ 21009310 (+)
G96898 NA non-coding downstream 237097 21061672 ~ 21062304 (+)
G96906 LOC103364786,LOC104920247 non-coding downstream 302488 21127063 ~ 21174307 (+)
G96963 LOC102235645,LOC103464121,LOC107392658,LOC103138531,LOC103371596,LOC106936986,LOC107100776,LOC101155672 non-coding downstream 486337 21310912 ~ 21314520 (+)
G97009 NA non-coding downstream 543543 21368118 ~ 21456800 (+)
prkacba prkacb other upstream 255424 20548999 ~ 20564824 (+)
G96513 NA other upstream 1288571 19530767 ~ 19531677 (+)
G96418 tsc22d2 other upstream 2034612 18782600 ~ 18785636 (+)
nmur1a LOC103368681,LOC104952433 other upstream 2155135 18646703 ~ 18665113 (+)
nppc nppc,LOC104932751,LOC103372810 other upstream 2960837 17855631 ~ 17859411 (+)
LOC120565275 ctxn1,LOC108166259,LOC106954365,LOC103138526,LOC104947303,LOC105353898 other downstream 586761 21411336 ~ 21441558 (+)
lsm7 lsm7,LOC102793261 other downstream 730319 21554894 ~ 21557731 (+)
G97093 NA other downstream 866322 21690897 ~ 21782000 (+)
G97321 NA other downstream 1459071 22283646 ~ 22287272 (+)
LOC120565764 LOC103367403 other downstream 1660936 22485511 ~ 22491235 (+)

Expression


Co-expression Network