plvapb


Basic Information

Item Value
gene id plvapb
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 14548589 ~ 14554920 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039812472.1
TGGCCCCTTTACACACCTAAGGGTCATTGTTTACATCCATCCATACATGCCTGTATGTTTCTGCACACTGACAGTGTGGCAGAGCTGTggaagacagagaaacaaacaTCACCACTGGTTGTTTTTCCACTTCTGCTCAACAGGGTTCACCTTGAGGCCTCAGCACTTGCTCTGCAGAGAAGATCACATCTGAACGGAAACCTTGTGGATTTTAGCAAAAACAATTCCTATTTGATCGTCCAAAACCAGCTGCAACCATTTCTCCCCCAGCAGTCATGTACAGCTCCAGCTACTCCCAGGCCAAGTTTGGCCTGGAGGCAAAAGTGCCTATGCACAAGCCCAAAGGGAAGAGCTGCGGCTACTACATGAGGATCGTCTTCTTCTTTTGCTCTCTGATCCAGTCTCTGATCATCGTCAGCCTGGTGCTCTTCCTCATCTATGGACAGCCGGAGAAGTCTGCAGAGGAAAAGAGGGTCCAGGAGCTGGAGCTGAACTTCAACAGGGTGAGTGAGAACAATATCCAGCTGAGAAAGGAGAAAGGCGAGCTGGGAGCTCAGCTGGGAGCTCGCACAGCTGAGAAAGCTGCTCTGGAGTCCGAGTTGGCAAAGCTGAAGACTGAAGCCAACAACACAGAACATacgctgaaaaataaattaACTATCTGTGAGAGTAAGGTGAGCATGATGATGCGTCGCTCCACCCTTGCAATCCAGCCCCCTCCTGTGGCCACTACTACCAATGAAATGAATTCTTTGAAGACCCTCAACGCTCGGCAGAAAGCTATGATAAACCTCATCGAGTCAAATTTCACCCAGATGGTTCAGTACCTGAGCCAGGAGAGAGACAAAGCCCTCAGAGAGCAAGACACCCACCAGCAGGATGCCATCACCCTGCGCAGGGAGAACAGGGAGCTGAAGGAGCAGCTCACCACCTACACCAGgaAGTGCAAAGAGGACTTTGCTCACTCTTTGGATGGGATCAAAACGGTGACCAGTGAATTCCTGAACAAGATCAACAACCTGTTTCCCCACCAGCTGACCTTTCACCTCAGCTGCCACAGCCAGCAGGTGCAGATGGAAAAGATCCGAAACAGCTGCACGAACCTCTCCAGAGACGTGGAAAACAAGTTCCAGCTGTATTTAGACAATGTGGGCAACAAGgTGGCTGAGATCCAATCCAAGTCCAGTCGTCTGGAGGTGCAAAACTCACAATTGACTTCTGACCTGCAGCAGTGTGAACGCAAACACAGTGAGACGGTCACCGAGGCCGCCAAGCAGCTGCAGCTCAAGCAAAAGACCCATGACGACCAGGTGGAGAAAATACTGATCGAGCAGAACCGGCTGAGAGAACAGAACAAGCTCCAGGAAGACAGTTTGGCCCTGAGAGATAAAGAGCTTCAGCGATTGCTCTCTGCTCAGCCCAACttcaagACTGGTGTTCCTAAAGCTGCCAGCCTACAGGCCTCTATTGGAGAACCTGGCATCAGCAAAACTCCCACGGTGAGATGAAATGAGTGGTGCGCCACAGTGATCAACATTTTGACTTTTAAAAAGACATGTATAAATTCCTTATACAACACTCTTTTATACAACCTGTAAATACCATGTCTATGTTAGTGACATATTTACTGTTGTTGGTTTGTGCATGCTTTGCCTAGCTCTACGTGGAATTGAATTGTGTTTGAGTTTAAACATTTGCTGTGAAAAGCCTTGGTATCTATATTAaggtaaatgtaaaaaatatccATGACACTGGTGTAAATATTTAAGATTGTGTGTCACTCGCTGTGGTTTCTGTAGTtacagaatgtttttttgtaattacaaataaattaaataaaaactgacTCAATCCTAAA

Function

NR:

description
plasmalemma vesicle-associated protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039812472.1 True 1858 mRNA 0.47 9 14548589 14554920

Neighbor

gene id symbol gene type direction distance location
babam1 babam1 coding upstream 4061 14537576 ~ 14544528 (+)
si:ch73-61d6.3 LOC107392864,LOC108238350,LOC103359431 coding upstream 50015 14480454 ~ 14498574 (+)
mfsd12b mfsd12 coding upstream 69522 14469044 ~ 14479067 (+)
csnk1g2b LOC106925954,LOC106953035,LOC103468226,LOC104921814,LOC103394965 coding upstream 81301 14424219 ~ 14467288 (+)
zgc:101100 NA coding upstream 125487 14418540 ~ 14423102 (+)
ano8b ano8,LOC103359425,LOC104965807 coding downstream 24107 14579027 ~ 14619203 (+)
abhd8b abhd8,LOC103359436 coding downstream 69359 14624279 ~ 14637054 (+)
axdnd1 axdnd1 coding downstream 394248 14949168 ~ 14961237 (+)
tdrd5 NA coding downstream 411346 14966266 ~ 14984677 (+)
fam163ab fam163a,LOC102222863 coding downstream 446249 15001169 ~ 15026319 (+)
G95372 NA non-coding upstream 179363 14368922 ~ 14369226 (+)
LOC120565959 NA non-coding upstream 284703 14258285 ~ 14263886 (+)
G95299 NA non-coding upstream 325995 14220571 ~ 14222594 (+)
G95297 NA non-coding upstream 340027 14206339 ~ 14208562 (+)
G95287 NA non-coding upstream 403271 14145005 ~ 14145318 (+)
LOC120565827 NA non-coding downstream 232148 14787068 ~ 14791606 (+)
G95492 NA non-coding downstream 324162 14879082 ~ 14879287 (+)
G95493 NA non-coding downstream 369032 14923952 ~ 14925603 (+)
G95496 crb1,LOC102787887,LOC102294192,LOC103365562 non-coding downstream 375592 14930512 ~ 14932081 (+)
LOC120565370 NA non-coding downstream 667213 15222133 ~ 15268185 (+)
LOC120564965 LOC102299696 other upstream 1148845 13390823 ~ 13399744 (+)
LOC120564964 LOC102797871,LOC101481459,LOC102301033,LOC106675533,LOC102797273,LOC102300313,LOC102200286 other upstream 1165842 13379398 ~ 13382747 (+)
LOC120565776 NA other upstream 1206491 13335734 ~ 13342098 (+)
G95046 NA other upstream 1328217 13173025 ~ 13220372 (+)
raver2 raver2 other upstream 1448144 13005568 ~ 13100445 (+)
G95460 NA other downstream 64438 14619358 ~ 14621413 (+)
LOC120565380 NA other downstream 134462 14689382 ~ 14704353 (+)
dennd1b NA other downstream 255448 14810368 ~ 14923845 (+)
LOC120564959 LOC104946909,LOC103360792,LOC102294988,LOC101486556,LOC102197099 other downstream 969009 15523929 ~ 15632812 (+)
kcnn1b LOC104945110,LOC103355562 other downstream 1734903 16289823 ~ 16301000 (+)

Expression


Co-expression Network