gorab (gorab)


Basic Information

Item Value
gene id gorab
gene name gorab
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 4934761 ~ 4946307 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039812508.1
gggtccTTGACGTGGCATCAATAACAAAGATGGCGGAAACGTTTAAAGCTTCTTAAGTTTTCCTGTATATTTCGAAGTTTAGAATGATTATATTTAGTCTATAAGCAGACTGTTTCATCTATGCGTTATTCTGGCTGCGTTGTTTGGGGTATTTGATGTGTGAAGCTGAACAATGAGCGGTTGGGCCGGTTTTTCTGAGGAGGAGTTACGGAAGATGCAGCAGAAAGACTCCGCTGGGTCCGCAGCAGCAGCCCGCGGACGGAAGCCGCTTCCAGCCAACCGGAGTCGGCAGCAGATCCAACGGGAGAAGGCTCTTCAGTTAGCCGCTCAGAAGAACGCTGGAGCCGCGTCTCTCTGCATCCCGCCAGAGCAGCAACTTACCAAACCGCCACCGGAGCAGCAACTCACCAAATCGCCACCGGAGCAGCAACTTACAAAACCGCCACCGGAGCAACAACTCACCACACCGCCGCCGCCGGAGGAAGCGGGAGCTACAGCGGTCGAACAGGTGGTGCAGCAGAACGCCGTCGAGATAAAGCCGGCTCCAGAGAAGGAAACCCCGGCGGTCAAAGAGCTGGAGATACAGGAGGTGGCACTACGGGAACAGACGCGTCTGGAGCAGCTGCAGCAAGAGCAGAAGACAATGGAAGAGAAGAATAAACGCAAGAAAGCTCTGCTGACAAAAACCATCGCCGAGAAGTCCAAACAGACTCAGGCGGAGGCTGTGAAGCTGAAGAGGATCCAGAAGGAGCTCCAGGCCCTCGATGACATGGTGTCCAATGATATCGGCATCCTAAGAGGCAAGATAGAACAAGCCAGCTGGGAATACTCCGCTGCCAgAAAGCGCTACGAGAAGGCGGAGGCGGAGTACGTGACGTCCAAGCTGGACCTGCACAAGAAGACGGAAGTGAAGGAGCAGCTGACGGAGCACCTCTGCGCCATCATCCAGCAGAACGAGCTGCGCAAAGCCCACAAGCTGGAGGAGCTgatgcagcagctgcagctccACGCCACCGACGAAGAGAGGGGCGGCTGCGCCGAGACGCAGAGAAACGGTCCGGCAGAGAGCGGGGAGGGAACGGAGCGATCAACCAAAGACTGTGGACCcacagaggaggaaaagggCCGGGGGGGCGTCCTGCAAGAGCCCCACCCGGTGACCGAACCACCCAAGACTGAACAGAACTGTAAAACTCTAGAAAACGGTGTTCAGAGTGAAATCGTGGCCTCCTGATGCTCAGAAAACTAGATTTAAATGTCTGGACTTTATCATGATCACACATGTCGTACTGTAGGGATCCATATGGAACACTAACGCTAATGTCAATGTCTCCACTAATGCTGTCGGCTAAGCGATGCTCGATGCTGTAGCATCCAGGGCTGGGTATCcaatagggatgcaccaaatccagatttttggggttcggccgaataccgaatccgcTGGTGAAGATTCTGCCGAAACCGAATACCAAATCCTACTCTCATCCTCAGTCCGTtgaaggtgcagtaggtaagactcataaaactaactttctgtcatatttgctgaaactgaccctatgttccagtagaactacatgaagcaggtacttaaaaaaa

Function

symbol description
gorab Predicted to be involved in non-motile cilium assembly. Predicted to be located in Golgi apparatus. Is expressed in notochord. Human ortholog(s) of this gene implicated in geroderma osteodysplasticum. Orthologous to human GORAB (golgin, RAB6 interacting).

NR:

description
RAB6-interacting golgin isoform X1

GO: NA

KEGG:

id description
K19748 GORAB, SCYL1BP1; RAB6-interacting golgin

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039812508.1 True 1602 mRNA 0.53 5 4934761 4946307

Neighbor

gene id symbol gene type direction distance location
mettl11b mettl11b coding upstream 61405 4852948 ~ 4873356 (+)
niban1a LOC104958505 coding upstream 150610 4714655 ~ 4784151 (+)
LOC120565686 LOC104953734 coding upstream 272576 4657761 ~ 4662185 (+)
LOC120565681 NA coding upstream 331608 4599472 ~ 4603153 (+)
LOC120565674 NA coding upstream 415168 4515052 ~ 4519593 (+)
prrx1b prrx1 coding downstream 20252 4966559 ~ 5000440 (+)
LOC120566192 NA coding downstream 78203 5024510 ~ 5201875 (+)
mast2 mast2,LOC102294889,LOC102799744 coding downstream 264863 5211170 ~ 5486885 (+)
LOC120565642 tspan1,LOC104930558 coding downstream 1056504 6002811 ~ 6029193 (+)
LOC120565748 NA coding downstream 1121376 6067683 ~ 6071247 (+)
G93345 NA non-coding upstream 41055 4893318 ~ 4893706 (+)
G93335 kifap3 non-coding upstream 129529 4798411 ~ 4805232 (+)
G93327 NA non-coding upstream 148817 4711274 ~ 4785944 (+)
G93323 NA non-coding upstream 175701 4692723 ~ 4759060 (+)
G93332 NA non-coding upstream 184592 4745280 ~ 4750169 (+)
G93431 NA non-coding downstream 112299 5058606 ~ 5100316 (+)
G93432 NA non-coding downstream 116020 5062327 ~ 5100734 (+)
G93448 NA non-coding downstream 381678 5327985 ~ 5328233 (+)
G93439 NA non-coding downstream 407037 5353344 ~ 5407242 (+)
G93441 NA non-coding downstream 453824 5400131 ~ 5411358 (+)
trmt1l trmt1l other upstream 221528 4685224 ~ 4713233 (+)
LOC120565391 NA other upstream 621246 4284755 ~ 4313515 (+)
G93150 NA other upstream 716935 4174602 ~ 4217826 (+)
frem1b LOC100693369,LOC101486624,LOC102206675,LOC102294239 other upstream 1110979 3714919 ~ 3823782 (+)
G92848 NA other upstream 1327936 3600978 ~ 3606825 (+)
G93613 NA other downstream 1089062 6035369 ~ 6051520 (+)
G93638 NA other downstream 1255778 6202085 ~ 6214017 (+)
rhpn1 rhpn1 other downstream 1408585 6354892 ~ 6381598 (+)
G93938 NA other downstream 2403503 7349810 ~ 7350587 (+)
LOC120565294 pycrl other downstream 2932612 7878919 ~ 7890177 (+)

Expression


Co-expression Network