oca2 (oca2)


Basic Information

Item Value
gene id oca2
gene name oca2
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 40206026 ~ 40260251 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039812530.1
CTACAGACCCACAGTGCTGAGCTCTTTGCTTGGTGAGcacaggagaggagaagaaacaCCTCAGCCTCTCTCGTCTTCAGCCTCTGTGCTCCAgctaacagcagcagcagcagcagcagccagagAAACAGTCCCAGCAACAGTAGCACATATATCAGCTTTTCTACAGGATTCAATTAGCGTGAATTACTTTTATTCATTTTGCTGTTGGATGTTCATAGTTTAACATCACAAACTTTATCATTACTActgttatcatcatcatcatcaatgtccttgtttttatcatccttcatcatcatcatcatcatcatcatctaaaACAACTTCATCTTTAAAGCAGTTTCATCATGTATTTGGAGAACAAAAACATGGAGATGGAGATGTCTCAGACGTCAGCCCAATGCCATCGCAGGAACAGCCTGAGGTCAACAGAGGCCGTCGCAGGGAACTTTGGGGAGCTGCGTCTGCTGCAGGGCATTTCAGACAGGAGAGACACCCAGAAGCTGCTGCAGCAATCTGCAGTTCTGCCCTCAGGACAGTGCGTCATCCATACTGAGGGCTTTGTCCCTGTTCGACAAGAGGATGGGCACAGTTTCAGTCTGGTTAATATTCTCAGAGGAAAAAGTAATTCAGCCAACATGACAGAGAGGTCACCTCTGCTGAGATTCTCTCAAGATGACAGTATGACCTACATGACCCTACATGACCCCAGCTTTGTTGGAGGGGAAGAGCCCTGGGACAACGGCTCCCTGGACCTGGAGAGGAGGTATAGGCTGGGCAGTGAGGTCACCAGCCTGTCCCTGTCCCGCTCCAGCTCCACGGAGAAGAGTGACCCTCTGGAAAACCTCAACCTCAGCTTCAGATTCACCAGTAATATGAAaTGCTGCTTCAAAGTCTCCAAAGTTACCATAATGTTTACTATCGTGGTTCTCTGCAGTCTGTTCTTCAGCATGTATCCAGACCGAGACAACCCCCGGAGGCTCTTGGCAGTGTCTTCAACAGATAGTTTCTCAATGAACCTGACGGATTTTCGCGACAACGCTTTGCTGAAGCTCCAGGTGGGAGGGCCTTTCACAGGGGGGATGATCGACCTCACCAACCAGGAGTATATCCTGATCCAGGTGGAGCAGACGGAGCAGGAGGGACAACGGAGGAGGAGGACCCAGCAGGTGATTCAGAATTGGACCATCCCTCTGCACAGTGAACGAAGTGACCAGATACTgttaacaaaaacatttgagATGGTCAGCAGTGACCCCATCTTCATCACGGTTCAAGCCTTCCTGCAGGATGATGAGGTGGTGCCGTTATCCATGACCCACCAGTCGCTCTACGTCAATGTGGAGACACAGGTGGCCATTGCTGGAATCATCCTGACTGGGGTCTACGTTCTCATCATCTTTGAGATTGTGCATCGTACTCTGGCTGCCATGCTGGGATCGTTGGCAGCCTTAGCTGCTCTGGCTGTCATTGGTGATCGGCCCAGTCTGGTTACTGTGGTGGAGTGGATCGACTATGAGACACTGGCTCTTCTGTTTGGCATGATGGTACTGGTGGCCATTTTTTCAGAGACTGGCTTCTTTGATTATTGCGCTGTGAAGGCTTACCAGTTATCCAGAGGAAGAGTGTGGCCAATGATCATGATCCTCTGTCTCATCGCTGCCATTCTCTCTGCATTTCTGGACAACGTGACCACTATGATGCTTTTCACCCCAGTCACCATCAGGTTGTGTGAGGTGCTTAATCTAGACCCCAGACATGTCCTGATTGCAGAAGTAATCTTCACCAACATTGGAGGGGCTGCCACAGCTGTCGGAGATCCACCCAATGTGATTATCGTATCAAATCAGGACCTGCGCAAAGAAGGGATTGATTTTGCCAGTTTCACAGGCTACATGTTCCTTGGAATATGCCTTGTCCTCCTCACCTCGTTTCCTTTCCTGCGGCTGCTCTACTGGAACAAAAAACTCTACAACAAAGAGTCCATTGAAATAGTTGAACTCAAGCATGAGATCCTGGTCTGGAGGCAGACGGCTCAGCGCATTAACCCTGCCAGCCGAGAGGAGACAGCTGTGAAATGCCTCCTGATGCAAAAGGTCCTCAACCTGGAAAGTCTGCTCCGCAAGATGATGAAAACCTTCCAAAgCCAAATTTCCCAAGAGGACAAGAACTGGGAGCAAAACATTCAAGAATTGCAAAAGAAGCACAGAATAACCGACAAGGTTCTCTTGGTGAAGTGTGTGTCCGTCCTTGGTGTGGTGATCTTCATGTTCTTTCTCAACTCCTTCGTTCCCAGCATTCATCTTGAGCTCGgttggATTGCTATCCTGGGTGCACTGTGGCTTTTGGTTCTGGCCGACATCCAGGATTTCGAGATTATTTTGCACCGGGTGGAGTGGGCCACGCTACTGTTCTTTGCCGCCCTCTTCGTTTTGATGGAGGCTTTAGCCCAGCTGCAGCTTATCGACTATATTGGAGAACAGACAGCACTGCTTATAAAAGCGGTGCCAGAAGACCAGCGCTTGGCTATAGCAATTATCTTGGTGATGTGGGTCTCGGCTCTGGCTTCTTCTCTCATTGACAACATTCCCTTCACTGCCACCATGATTCCAGTTCTCATCAACTTAAGTCAGGATGCAGATGTGAACCTGCCAATAAAACCTCTCATCTTTGCCTTGGCCATGGGAGCCTGTCTTGGAGGAAATGGCACATTGATAGGAGCATCAGCCAACGTTGTGTGTGCAGGAATTGCTGAACAACACGGCTATGGCTTTTCCTTCATTGAGTTCTTCAGGTTAGGATTCCCCATGATGATAATGACGTGTATGATCGGCATGTGCTACCTGCTAGCCACCCACATTGGACTTGGATGGAACATGTAATCCACAACTGCTATACAGAGCCAAagcgactgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgaccactCCATCAAGCATTTAGCGTACTGTAAATGTGATAAGTAAACTGATCGACTAATCAGATTAAAGGCACTATATGAAGCACAGAAGCCATAAGTATATTGAAAATGTCTTTGACTGAAGTGCTGAACAGCAGGGACAAGAATTACAGGAGCTTTGAACTAAATTACAGGAGCTTTGAACTAAACTTTGAATCTAACATCCAACAATTTGAGTATGACGCATTAGTTCTTTGTGACTGGTCAACAGTCACCCTGTTAAGTTTTaccaactttgaaaaaaattcaaACCTTGTGTCCTCACAAGAGTTGACCCAAGGGAAGGACATGGGTCTAAAGGAGAAAATGCTGTACATGGTGCTACTGCCTCAATGGGTATAACTGGGGTAAATGATTCCAGCTATGGCCTCTGATGTCAGACTGTTCATTCTTTTGGAAATCTATGTGGTCTGTTTACAAAAAGCAACAACTAATAATTAATTGTTTTACACTGATTTGCTTTTAGAGACACTGATCACTGTTTTAGGCAAACATTTCACCCATGGTCTACCAAATGTATGTTGATATTTTAAAGGAACCACAATACCCAGTGAAAgggattttatattttatattaatatctAATATTTTTGTCAGATGCCCAAATCTCAATGTGTCATGAATGAACAGCATCGATCAAATTGGAGAATAGCagaatgattaaaataaaacagatgTAGACTgtt
>XM_039812531.1
CTACAGACCCACAGTGCTGAGCTCTTTGCTTGGTGAGcacaggagaggagaagaaacaCCTCAGCCTCTCTCGTCTTCAGCCTCTGTGCTCCAgctaacagcagcagcagcagcagcagccagagAAACAGTCCCAGCAACAGTAGCACATATATCAGCTTTTCTACAGGATTCAATTAGCGTGAATTACTTTTATTCATTTTGCTGTTGGATGTTCATAGTTTAACATCACAAACTTTATCATTACTActgttatcatcatcatcatcaatgtccttgtttttatcatccttcatcatcatcatcatcatcatcatctaaaACAACTTCATCTTTAAAGTTTCATCATGTATTTGGAGAACAAAAACATGGAGATGGAGATGTCTCAGACGTCAGCCCAATGCCATCGCAGGAACAGCCTGAGGTCAACAGAGGCCGTCGCAGGGAACTTTGGGGAGCTGCGTCTGCTGCAGGGCATTTCAGACAGGAGAGACACCCAGAAGCTGCTGCAGCAATCTGCAGTTCTGCCCTCAGGACAGTGCGTCATCCATACTGAGGGCTTTGTCCCTGTTCGACAAGAGGATGGGCACAGTTTCAGTCTGGTTAATATTCTCAGAGGAAAAAGTAATTCAGCCAACATGACAGAGAGGTCACCTCTGCTGAGATTCTCTCAAGATGACAGTATGACCTACATGACCCTACATGACCCCAGCTTTGTTGGAGGGGAAGAGCCCTGGGACAACGGCTCCCTGGACCTGGAGAGGAGGTATAGGCTGGGCAGTGAGGTCACCAGCCTGTCCCTGTCCCGCTCCAGCTCCACGGAGAAGAGTGACCCTCTGGAAAACCTCAACCTCAGCTTCAGATTCACCAGTAATATGAAaTGCTGCTTCAAAGTCTCCAAAGTTACCATAATGTTTACTATCGTGGTTCTCTGCAGTCTGTTCTTCAGCATGTATCCAGACCGAGACAACCCCCGGAGGCTCTTGGCAGTGTCTTCAACAGATAGTTTCTCAATGAACCTGACGGATTTTCGCGACAACGCTTTGCTGAAGCTCCAGGTGGGAGGGCCTTTCACAGGGGGGATGATCGACCTCACCAACCAGGAGTATATCCTGATCCAGGTGGAGCAGACGGAGCAGGAGGGACAACGGAGGAGGAGGACCCAGCAGGTGATTCAGAATTGGACCATCCCTCTGCACAGTGAACGAAGTGACCAGATACTgttaacaaaaacatttgagATGGTCAGCAGTGACCCCATCTTCATCACGGTTCAAGCCTTCCTGCAGGATGATGAGGTGGTGCCGTTATCCATGACCCACCAGTCGCTCTACGTCAATGTGGAGACACAGGTGGCCATTGCTGGAATCATCCTGACTGGGGTCTACGTTCTCATCATCTTTGAGATTGTGCATCGTACTCTGGCTGCCATGCTGGGATCGTTGGCAGCCTTAGCTGCTCTGGCTGTCATTGGTGATCGGCCCAGTCTGGTTACTGTGGTGGAGTGGATCGACTATGAGACACTGGCTCTTCTGTTTGGCATGATGGTACTGGTGGCCATTTTTTCAGAGACTGGCTTCTTTGATTATTGCGCTGTGAAGGCTTACCAGTTATCCAGAGGAAGAGTGTGGCCAATGATCATGATCCTCTGTCTCATCGCTGCCATTCTCTCTGCATTTCTGGACAACGTGACCACTATGATGCTTTTCACCCCAGTCACCATCAGGTTGTGTGAGGTGCTTAATCTAGACCCCAGACATGTCCTGATTGCAGAAGTAATCTTCACCAACATTGGAGGGGCTGCCACAGCTGTCGGAGATCCACCCAATGTGATTATCGTATCAAATCAGGACCTGCGCAAAGAAGGGATTGATTTTGCCAGTTTCACAGGCTACATGTTCCTTGGAATATGCCTTGTCCTCCTCACCTCGTTTCCTTTCCTGCGGCTGCTCTACTGGAACAAAAAACTCTACAACAAAGAGTCCATTGAAATAGTTGAACTCAAGCATGAGATCCTGGTCTGGAGGCAGACGGCTCAGCGCATTAACCCTGCCAGCCGAGAGGAGACAGCTGTGAAATGCCTCCTGATGCAAAAGGTCCTCAACCTGGAAAGTCTGCTCCGCAAGATGATGAAAACCTTCCAAAgCCAAATTTCCCAAGAGGACAAGAACTGGGAGCAAAACATTCAAGAATTGCAAAAGAAGCACAGAATAACCGACAAGGTTCTCTTGGTGAAGTGTGTGTCCGTCCTTGGTGTGGTGATCTTCATGTTCTTTCTCAACTCCTTCGTTCCCAGCATTCATCTTGAGCTCGgttggATTGCTATCCTGGGTGCACTGTGGCTTTTGGTTCTGGCCGACATCCAGGATTTCGAGATTATTTTGCACCGGGTGGAGTGGGCCACGCTACTGTTCTTTGCCGCCCTCTTCGTTTTGATGGAGGCTTTAGCCCAGCTGCAGCTTATCGACTATATTGGAGAACAGACAGCACTGCTTATAAAAGCGGTGCCAGAAGACCAGCGCTTGGCTATAGCAATTATCTTGGTGATGTGGGTCTCGGCTCTGGCTTCTTCTCTCATTGACAACATTCCCTTCACTGCCACCATGATTCCAGTTCTCATCAACTTAAGTCAGGATGCAGATGTGAACCTGCCAATAAAACCTCTCATCTTTGCCTTGGCCATGGGAGCCTGTCTTGGAGGAAATGGCACATTGATAGGAGCATCAGCCAACGTTGTGTGTGCAGGAATTGCTGAACAACACGGCTATGGCTTTTCCTTCATTGAGTTCTTCAGGTTAGGATTCCCCATGATGATAATGACGTGTATGATCGGCATGTGCTACCTGCTAGCCACCCACATTGGACTTGGATGGAACATGTAATCCACAACTGCTATACAGAGCCAAagcgactgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgaccactCCATCAAGCATTTAGCGTACTGTAAATGTGATAAGTAAACTGATCGACTAATCAGATTAAAGGCACTATATGAAGCACAGAAGCCATAAGTATATTGAAAATGTCTTTGACTGAAGTGCTGAACAGCAGGGACAAGAATTACAGGAGCTTTGAACTAAATTACAGGAGCTTTGAACTAAACTTTGAATCTAACATCCAACAATTTGAGTATGACGCATTAGTTCTTTGTGACTGGTCAACAGTCACCCTGTTAAGTTTTaccaactttgaaaaaaattcaaACCTTGTGTCCTCACAAGAGTTGACCCAAGGGAAGGACATGGGTCTAAAGGAGAAAATGCTGTACATGGTGCTACTGCCTCAATGGGTATAACTGGGGTAAATGATTCCAGCTATGGCCTCTGATGTCAGACTGTTCATTCTTTTGGAAATCTATGTGGTCTGTTTACAAAAAGCAACAACTAATAATTAATTGTTTTACACTGATTTGCTTTTAGAGACACTGATCACTGTTTTAGGCAAACATTTCACCCATGGTCTACCAAATGTATGTTGATATTTTAAAGGAACCACAATACCCAGTGAAAgggattttatattttatattaatatctAATATTTTTGTCAGATGCCCAAATCTCAATGTGTCATGAATGAACAGCATCGATCAAATTGGAGAATAGCagaatgattaaaataaaacagatgTAGACTgtt

Function

symbol description
oca2 Acts upstream of or within iridophore differentiation; melanin biosynthetic process; and melanocyte differentiation. Predicted to be located in membrane. Predicted to be integral component of membrane. Human ortholog(s) of this gene implicated in actinic keratosis; oculocutaneous albinism type II; pigmentation disease; skin cancer (multiple); and squamous cell carcinoma. Orthologous to human OCA2 (OCA2 melanosomal transmembrane protein).

NR:

description
PREDICTED: P protein-like

GO:

id name namespace
GO:0055085 transmembrane transport biological_process
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K24200 OCA2; P protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039812530.1 True 3680 mRNA 0.46 24 40206026 40260251
XM_039812531.1 False 3677 mRNA 0.46 24 40206026 40260251

Neighbor

gene id symbol gene type direction distance location
herc2 LOC103356925 coding upstream 8788 40139433 ~ 40197238 (+)
cyfip1 cyfip1 coding upstream 80080 40072042 ~ 40125946 (+)
tubgcp5 tubgcp5 coding upstream 136377 40052317 ~ 40069649 (+)
slc9a7 NA coding upstream 169706 40006247 ~ 40036320 (+)
gtpbp6 gtpbp6,LOC103356937,LOC102777366 coding upstream 242490 39959058 ~ 39963536 (+)
gabrb3 gabrb3,LOC106914751,LOC103365202 coding downstream 157742 40417993 ~ 40486609 (+)
ube3a ube3a,LOC103365788 coding downstream 307696 40567947 ~ 40582064 (+)
tmem131 NA coding downstream 343283 40603534 ~ 40637684 (+)
LOC120564870 bivm coding downstream 383708 40643959 ~ 40650830 (+)
nme7 nme7 coding downstream 397595 40657846 ~ 40683242 (+)
G101688 NA non-coding upstream 70526 40135207 ~ 40135500 (+)
G101687 nipa1,LOC102781059 non-coding upstream 72672 40129801 ~ 40133354 (+)
LOC120565265 NA non-coding upstream 160520 40044182 ~ 40045506 (+)
G101666 NA non-coding upstream 187333 39984470 ~ 40018693 (+)
G101796 NA non-coding downstream 112 40260363 ~ 40260609 (+)
G101823 NA non-coding downstream 226540 40486791 ~ 40487021 (+)
G101831 NA non-coding downstream 247249 40507500 ~ 40507759 (+)
G101832 NA non-coding downstream 248640 40508891 ~ 40509367 (+)
G101990 NA non-coding downstream 599786 40860037 ~ 40940317 (+)
LOC120565298 cdkl5,LOC103356958 other upstream 465749 39693912 ~ 39740277 (+)
reps2 reps2,LOC102792668 other upstream 613264 39561061 ~ 39592762 (+)
LOC120565708 LOC103369944,LOC100698021,LOC101482931,LOC102791229,LOC102291415,LOC102212992 other upstream 741576 39454120 ~ 39464450 (+)
prdm5 prdm5 other upstream 844293 39323584 ~ 39361733 (+)
usp46 usp46 other upstream 1325421 38866435 ~ 38880605 (+)
atp10a atp10a other downstream 254842 40515093 ~ 40559895 (+)
G102165 NA other downstream 1192423 41452674 ~ 41453306 (+)

Expression


Co-expression Network