LOC120565209


Basic Information

Item Value
gene id LOC120565209
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 31828785 ~ 31831713 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005640201.1
CTCCTCCAacggtctttttcttttctccgaGGCGGGAGAACACTTTTGGAAACACTGAAGCGATTGAATATGGAGGACTTTGTTAAACTAAAGTTAACAGAACGGCAACTTCTTGAGCTGATTGACACTTTTGCAGATTGTGCAGGACTTCGAGGTTCTTCATAAAGAGGCATCAGACTAAATCTTTGACCTGGAGGAGGTTCAGCGATAAGCTTGTTCATGCGGCCCAGTGGGAGGGGTAGAAGCTCCACgtgcagacagagacagagtctTTGTCTCAAGgCTCCAAAGACTACATTGCCCTGATGGTTCTGCCAGGCCTGATTCCACCTGCAGTCTTCAGGATGGGCCAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005640201.1 True 354 lncRNA 0.48 4 31828785 31831713

Neighbor

gene id symbol gene type direction distance location
uhmk1 uhmk1 coding upstream 314869 31403773 ~ 31513916 (+)
akr1a1b akr1a1,LOC102789595 coding upstream 883160 30933908 ~ 30945625 (+)
magoh magoh,mgn,LOC106560432,LOC107387361,LOC101074452,LOC107731141,LOC107549138 coding upstream 992158 30832801 ~ 30836627 (+)
uck2a uck2,LOC100698935,LOC102786757 coding upstream 999514 30824223 ~ 30829271 (+)
LOC120566104 pbx1,LOC104964292,LOC108272157,LOC103479586 coding upstream 1033956 30727013 ~ 30794829 (+)
ect2 ect2,LOC102798372 coding downstream 389320 32221033 ~ 32411447 (+)
si:ch211-51h4.2 LOC102206538,LOC102309665,LOC102076398 coding downstream 1940733 33772446 ~ 33875096 (+)
si:ch211-247n2.1 LOC102307905,LOC103372256,LOC102782276,LOC101477182,LOC102211467 coding downstream 2200177 34031890 ~ 34063575 (+)
LOC120565538 cherp coding downstream 2234402 34066115 ~ 34093575 (+)
LOC120565861 LOC103354068,LOC104966713 coding downstream 2549034 34380747 ~ 34384027 (+)
G99837 NA non-coding upstream 112772 31715726 ~ 31716013 (+)
G99836 NA non-coding upstream 113286 31715160 ~ 31715499 (+)
G99824 NA non-coding upstream 129249 31656039 ~ 31699536 (+)
G99822 NA non-coding upstream 163151 31654270 ~ 31665634 (+)
G99821 NA non-coding upstream 165089 31648753 ~ 31663696 (+)
LOC120565211 NA non-coding downstream 28 31831741 ~ 31832455 (+)
G99880 NA non-coding downstream 31424 31863137 ~ 31863649 (+)
LOC120565210 NA non-coding downstream 189305 32021018 ~ 32028587 (+)
G99907 NA non-coding downstream 356695 32188408 ~ 32188807 (+)
G99994 NA non-coding downstream 761226 32592939 ~ 32593185 (+)
LOC120565823 NA other upstream 61246 31761992 ~ 31767539 (+)
LOC120564930 NA other upstream 185339 31613889 ~ 31643446 (+)
G99803 NA other upstream 197284 31629816 ~ 31631501 (+)
G99791 NA other upstream 202989 31622698 ~ 31625796 (+)
slc1a7b LOC103368436,LOC102788729,LOC102303821 other upstream 525958 31095881 ~ 31302827 (+)
nlgn1 nlgn1,LOC102797975 other downstream 605134 32436847 ~ 32878633 (+)
LOC120566032 naaladl2,LOC102797677,LOC101487368 other downstream 1411500 33243213 ~ 33762919 (+)
G100087 NA other downstream 2043496 33875209 ~ 33878331 (+)
G100174 calr3 other downstream 2672930 34504643 ~ 34507552 (+)
dsg2.1 NA other downstream 4383751 36215464 ~ 36234599 (+)

Expression


Co-expression Network