LOC120565210


Basic Information

Item Value
gene id LOC120565210
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 32021018 ~ 32028587 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005640202.1
CGTTACCAGTTGGTCCTCACACAGTGGTGTGTCTGGTGGGTGTCCTCTTTACCCAAGTCCAATGTGTGGAGGTGCTGTAAACAAAATCTCAAAAAGGGTAACAGGTTAAGTCGCTTGCGTGTGCACATTCTATACCTCAGTACAATAAGCAGAGCTTTTGTCAAATGTAGGCATGTTGCATTTTGAATGCAAACCACTATACTTGAGATTTTGGTAGGAATTCTCCATTTTGGATAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005640202.1 True 237 lncRNA 0.42 3 32021018 32028587

Neighbor

gene id symbol gene type direction distance location
uhmk1 uhmk1 coding upstream 507102 31403773 ~ 31513916 (+)
akr1a1b akr1a1,LOC102789595 coding upstream 1075393 30933908 ~ 30945625 (+)
magoh magoh,mgn,LOC106560432,LOC107387361,LOC101074452,LOC107731141,LOC107549138 coding upstream 1184391 30832801 ~ 30836627 (+)
uck2a uck2,LOC100698935,LOC102786757 coding upstream 1191747 30824223 ~ 30829271 (+)
LOC120566104 pbx1,LOC104964292,LOC108272157,LOC103479586 coding upstream 1226189 30727013 ~ 30794829 (+)
ect2 ect2,LOC102798372 coding downstream 192446 32221033 ~ 32411447 (+)
si:ch211-51h4.2 LOC102206538,LOC102309665,LOC102076398 coding downstream 1743859 33772446 ~ 33875096 (+)
si:ch211-247n2.1 LOC102307905,LOC103372256,LOC102782276,LOC101477182,LOC102211467 coding downstream 2003303 34031890 ~ 34063575 (+)
LOC120565538 cherp coding downstream 2037528 34066115 ~ 34093575 (+)
LOC120565861 LOC103354068,LOC104966713 coding downstream 2352160 34380747 ~ 34384027 (+)
G99880 NA non-coding upstream 157369 31863137 ~ 31863649 (+)
LOC120565211 NA non-coding upstream 188563 31831741 ~ 31832455 (+)
LOC120565209 NA non-coding upstream 189305 31828785 ~ 31831713 (+)
G99837 NA non-coding upstream 305005 31715726 ~ 31716013 (+)
G99836 NA non-coding upstream 305519 31715160 ~ 31715499 (+)
G99907 NA non-coding downstream 159821 32188408 ~ 32188807 (+)
G99994 NA non-coding downstream 564352 32592939 ~ 32593185 (+)
G100013 NA non-coding downstream 853093 32881680 ~ 32886149 (+)
G100028 NA non-coding downstream 1050350 33078937 ~ 33079841 (+)
G100043 NA non-coding downstream 1175593 33204180 ~ 33204746 (+)
LOC120565823 NA other upstream 253479 31761992 ~ 31767539 (+)
LOC120564930 NA other upstream 377572 31613889 ~ 31643446 (+)
G99803 NA other upstream 389517 31629816 ~ 31631501 (+)
G99791 NA other upstream 395222 31622698 ~ 31625796 (+)
slc1a7b LOC103368436,LOC102788729,LOC102303821 other upstream 718191 31095881 ~ 31302827 (+)
nlgn1 nlgn1,LOC102797975 other downstream 408260 32436847 ~ 32878633 (+)
LOC120566032 naaladl2,LOC102797677,LOC101487368 other downstream 1214626 33243213 ~ 33762919 (+)
G100087 NA other downstream 1846622 33875209 ~ 33878331 (+)
G100174 calr3 other downstream 2476056 34504643 ~ 34507552 (+)
dsg2.1 NA other downstream 4186877 36215464 ~ 36234599 (+)

Expression


Co-expression Network