LOC120565211


Basic Information

Item Value
gene id LOC120565211
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 31831741 ~ 31832455 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005640203.1
GCCATGAAGGCCTTCATCGATCTTAAGCCTgTCGGAGCCAACATGGTGGAGTACCTTCAGGCAGCAGACCAGGCCATACCCCTGCACCCTGGTGTTGGGAGGCGAGGACTGCTGCTCTCAGGCATTCACCGTTCCCAGTGGGCCGGCCCTGGAGCACGACAGCGTTGTCCAAGCTGTACATgtttgtgtcaaatgtttacatGTGTTTGATATCAATTTCCCAAAGCAGTGTTTCTCTGCTTAGCAGTTCCTCCAGAAAGAATGGGGGGTGGTAGTAATGTGGCCCCATGCGTTTGTTTTTTGGAAATGCACATGCCATAAGggaattctctctctctgtctctctctaatatTTACGAGGAATATAAGGAGAAaattaattgttaataattgttgCTTGTATTAGTCCAGTTATTTGATACTCATTTTGAAATGAGGTAGGGATAATGTGGCCCCATGCATTTCTTCTTTGGAAACGCTCATGTGATAAGGGAATTGGACTTGTTATTGTTATTCCAGTTTTTCTCTTTAAATgagtaaattaaatattgttCAATAAAATCAGTGACATTAA

Function

GO: NA

KEGG:

id description
ko04113 Meiosis - yeast

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005640203.1 True 574 lncRNA 0.43 2 31831741 31832455

Neighbor

gene id symbol gene type direction distance location
uhmk1 uhmk1 coding upstream 317825 31403773 ~ 31513916 (+)
akr1a1b akr1a1,LOC102789595 coding upstream 886116 30933908 ~ 30945625 (+)
magoh magoh,mgn,LOC106560432,LOC107387361,LOC101074452,LOC107731141,LOC107549138 coding upstream 995114 30832801 ~ 30836627 (+)
uck2a uck2,LOC100698935,LOC102786757 coding upstream 1002470 30824223 ~ 30829271 (+)
LOC120566104 pbx1,LOC104964292,LOC108272157,LOC103479586 coding upstream 1036912 30727013 ~ 30794829 (+)
ect2 ect2,LOC102798372 coding downstream 388578 32221033 ~ 32411447 (+)
si:ch211-51h4.2 LOC102206538,LOC102309665,LOC102076398 coding downstream 1939991 33772446 ~ 33875096 (+)
si:ch211-247n2.1 LOC102307905,LOC103372256,LOC102782276,LOC101477182,LOC102211467 coding downstream 2199435 34031890 ~ 34063575 (+)
LOC120565538 cherp coding downstream 2233660 34066115 ~ 34093575 (+)
LOC120565861 LOC103354068,LOC104966713 coding downstream 2548292 34380747 ~ 34384027 (+)
LOC120565209 NA non-coding upstream 28 31828785 ~ 31831713 (+)
G99837 NA non-coding upstream 115728 31715726 ~ 31716013 (+)
G99836 NA non-coding upstream 116242 31715160 ~ 31715499 (+)
G99824 NA non-coding upstream 132205 31656039 ~ 31699536 (+)
G99822 NA non-coding upstream 166107 31654270 ~ 31665634 (+)
G99880 NA non-coding downstream 30682 31863137 ~ 31863649 (+)
LOC120565210 NA non-coding downstream 188563 32021018 ~ 32028587 (+)
G99907 NA non-coding downstream 355953 32188408 ~ 32188807 (+)
G99994 NA non-coding downstream 760484 32592939 ~ 32593185 (+)
G100013 NA non-coding downstream 1049225 32881680 ~ 32886149 (+)
LOC120565823 NA other upstream 64202 31761992 ~ 31767539 (+)
LOC120564930 NA other upstream 188295 31613889 ~ 31643446 (+)
G99803 NA other upstream 200240 31629816 ~ 31631501 (+)
G99791 NA other upstream 205945 31622698 ~ 31625796 (+)
slc1a7b LOC103368436,LOC102788729,LOC102303821 other upstream 528914 31095881 ~ 31302827 (+)
nlgn1 nlgn1,LOC102797975 other downstream 604392 32436847 ~ 32878633 (+)
LOC120566032 naaladl2,LOC102797677,LOC101487368 other downstream 1410758 33243213 ~ 33762919 (+)
G100087 NA other downstream 2042754 33875209 ~ 33878331 (+)
G100174 calr3 other downstream 2672188 34504643 ~ 34507552 (+)
dsg2.1 NA other downstream 4383009 36215464 ~ 36234599 (+)

Expression


Co-expression Network