Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC120565354 |
| gene name | NA |
| gene type | non-coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053120.1 |
| NCBI id | CM020917.1 |
| chromosome length | 41568296 |
| location | 38247528 ~ 38248312 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005640226.1 | True | 205 | lncRNA | 0.45 | 3 | 38247528 | 38248312 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| aasdh | NA | coding | upstream | 12264 | 38217815 ~ 38235264 (+) |
| ppat | ppat | coding | upstream | 38041 | 38198996 ~ 38209487 (+) |
| LOC120564983 | LOC100690982,LOC103357424,LOC102799593,LOC101477196,LOC104919101 | coding | upstream | 58842 | 38179031 ~ 38188686 (+) |
| nrl | LOC104947091,LOC103357430,LOC105353878 | coding | upstream | 69165 | 38168461 ~ 38178363 (+) |
| LOC120565755 | LOC103357426,LOC102194044,LOC102293839,LOC102798827 | coding | upstream | 111348 | 38093026 ~ 38136180 (+) |
| chst14 | chst14 | coding | downstream | 12213 | 38260525 ~ 38263359 (+) |
| nmu | NA | coding | downstream | 59562 | 38307874 ~ 38314350 (+) |
| clocka | clock,LOC102778122 | coding | downstream | 69621 | 38317933 ~ 38344663 (+) |
| kdr | kdr | coding | downstream | 130904 | 38379216 ~ 38410217 (+) |
| lnx1 | lnx1 | coding | downstream | 388497 | 38636809 ~ 38681396 (+) |
| G101130 | NA | non-coding | upstream | 45623 | 38200569 ~ 38201905 (+) |
| G101081 | NA | non-coding | upstream | 184856 | 38057588 ~ 38062672 (+) |
| G101080 | NA | non-coding | upstream | 200705 | 38046044 ~ 38046823 (+) |
| LOC120565003 | NA | non-coding | upstream | 232254 | 38013189 ~ 38015274 (+) |
| G101066 | LOC108281047 | non-coding | upstream | 248825 | 37998455 ~ 37998703 (+) |
| G101208 | NA | non-coding | downstream | 120385 | 38368697 ~ 38370401 (+) |
| G101211 | NA | non-coding | downstream | 124252 | 38372564 ~ 38372975 (+) |
| G101232 | kit | non-coding | downstream | 212362 | 38460674 ~ 38463579 (+) |
| G101245 | pdgfra | non-coding | downstream | 266060 | 38514372 ~ 38514831 (+) |
| LOC120564886 | NA | non-coding | downstream | 286253 | 38534565 ~ 38552304 (+) |
| G100843 | NA | other | upstream | 757456 | 37463914 ~ 37490072 (+) |
| prrc2c | NA | other | upstream | 1289168 | 36932655 ~ 36958360 (+) |
| G100671 | NA | other | upstream | 1548659 | 36695437 ~ 36698869 (+) |
| sass6 | sass6,LOC102776185 | other | upstream | 1635782 | 36596041 ~ 36611746 (+) |
| smim24 | NA | other | upstream | 1712946 | 36495484 ~ 36534582 (+) |
| usp46 | usp46 | other | downstream | 618123 | 38866435 ~ 38880605 (+) |
| prdm5 | prdm5 | other | downstream | 1075272 | 39323584 ~ 39361733 (+) |
| LOC120565708 | LOC103369944,LOC100698021,LOC101482931,LOC102791229,LOC102291415,LOC102212992 | other | downstream | 1205808 | 39454120 ~ 39464450 (+) |
| reps2 | reps2,LOC102792668 | other | downstream | 1312749 | 39561061 ~ 39592762 (+) |
| LOC120565298 | cdkl5,LOC103356958 | other | downstream | 1445600 | 39693912 ~ 39740277 (+) |
