LOC120565412


Basic Information

Item Value
gene id LOC120565412
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 1433658 ~ 1436614 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005640235.1
CCCTCACAAATGATAGCAGATCCTCTACCATTTCAATGTAGGAACTCCAAAACTGGAAAGGCACTTTGGAGGTCAGCAGCAACTTTTAAAGCAGCTTCACGGCAGTCTTGAGAAAGGGTTTCAAGGTAATCCCAGATCCTCAGCCCTGCTGTGAGATATCTTCTTGACCTGATCTGACTAAACCCTGACACATCTATTCTGCTGAAACAATGAAAATGCTCTTTGTTTTTCACGGTTCATCATAAAACCCTTTTAATGTTTTGCTCAACTGTTTGGTGGCGTGCATTTTCAGTCGctatatgttgaaaaatttgTCCACTAGATGTCGCTGTGTCTATAGTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005640235.1 True 343 lncRNA 0.42 3 1433658 1436614

Neighbor

gene id symbol gene type direction distance location
LOC120566171 LOC108248660 coding upstream 52744 1322405 ~ 1380914 (+)
plppr3b NA coding upstream 408515 1010747 ~ 1025143 (+)
med16 med16 coding upstream 424445 983651 ~ 1009213 (+)
grin3bb grin3b coding upstream 478422 886359 ~ 955236 (+)
wdr18 wdr18 coding upstream 579160 832241 ~ 854498 (+)
LOC120565564 LOC102210819 coding downstream 101385 1537999 ~ 1574777 (+)
LOC120565565 LOC108250349,LOC108249964 coding downstream 188960 1625574 ~ 1630680 (+)
sid1 NA coding downstream 199349 1635963 ~ 1637498 (+)
serpinc1 NA coding downstream 454940 1891554 ~ 1908999 (+)
LOC120565574 NA coding downstream 544224 1980838 ~ 1993868 (+)
G92183 NA non-coding upstream 20787 1391329 ~ 1412871 (+)
G92076 NA non-coding upstream 25976 1356878 ~ 1407682 (+)
G92084 NA non-coding upstream 30731 1385398 ~ 1402927 (+)
G92082 NA non-coding upstream 45781 1387509 ~ 1387877 (+)
G92069 NA non-coding upstream 48643 1381328 ~ 1385015 (+)
G92080 NA non-coding downstream 21549 1458163 ~ 1476779 (+)
LOC120565414 NA non-coding downstream 58194 1494808 ~ 1495367 (+)
G92088 NA non-coding downstream 132754 1569368 ~ 1604303 (+)
G92083 NA non-coding downstream 141905 1578519 ~ 1615013 (+)
G92195 NA non-coding downstream 145548 1582162 ~ 1582542 (+)
G92169 dbt,LOC102778223 other upstream 177464 1241387 ~ 1256194 (+)
trmt13 NA other upstream 204979 1220810 ~ 1228679 (+)
G92157 NA other upstream 229612 1202887 ~ 1204046 (+)
G92146 NA other upstream 263612 1168821 ~ 1170046 (+)
G92019 NA other upstream 674682 722373 ~ 758976 (+)
LOC120565410 camk4,LOC102194929,LOC102785978 other downstream 27105 1463719 ~ 1535856 (+)
G92201 NA other downstream 142341 1578955 ~ 1910061 (+)
G92234 NA other downstream 260360 1696974 ~ 1804395 (+)
G92264 NA other downstream 431038 1867652 ~ 2000993 (+)
LOC120565570 NA other downstream 431107 1867721 ~ 1889087 (+)

Expression


Co-expression Network