LOC120565416


Basic Information

Item Value
gene id LOC120565416
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 1699420 ~ 1700502 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005640239.1
GGTTTACAGGTAATTTGCATATGATTTGCATACTGTGAGAGACTGCACCTCCACAGGCATCCTCACAGATTACCTATATCTGCAATGGcttccacaagttcacctggaacctccaaatctaaGATATACAAGATCTTTTCTTGGAGGGGGACCATGACAGAGTGACAGAAGAGCCTGCCAGTGGAGTACTTTTACCACCCATCCAGTGCCCTCTGAGGCCGCAGACTGTGGCAGAACTGAGGGCAGCCATTTACCCTGTGACTAACTCCTAGTACAATGGCGGATAGCTTTGCAAGACTGCACTTAACTATGTGATTCTTCACACATAAACATGGCAGGATAACACAGGAAAAccattttgttgtttaaaatgaCACATACCACTACTACTTTATATGTAGTACTGATTTTAATCCTTAACAGTTTTTGAAATaacatgcatttacagtatggaCTCCAGCAAAACAGTTAAATCTGTACCTTTTCAatgaataacaaataaatatattcaagtAAGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005640239.1 True 519 lncRNA 0.40 2 1699420 1700502

Neighbor

gene id symbol gene type direction distance location
sid1 NA coding upstream 61922 1635963 ~ 1637498 (+)
LOC120565565 LOC108250349,LOC108249964 coding upstream 68740 1625574 ~ 1630680 (+)
LOC120565564 LOC102210819 coding upstream 124643 1537999 ~ 1574777 (+)
LOC120566171 LOC108248660 coding upstream 318506 1322405 ~ 1380914 (+)
plppr3b NA coding upstream 674277 1010747 ~ 1025143 (+)
serpinc1 NA coding downstream 191052 1891554 ~ 1908999 (+)
LOC120565574 NA coding downstream 280336 1980838 ~ 1993868 (+)
dph5 dph5,LOC102795811 coding downstream 350460 2050962 ~ 2071903 (+)
LOC120565427 NA coding downstream 711729 2412231 ~ 2420605 (+)
LOC120565428 NA coding downstream 723485 2423987 ~ 2427127 (+)
G92070 NA non-coding upstream 23280 1418749 ~ 1676140 (+)
G92228 NA non-coding upstream 39054 1659798 ~ 1660366 (+)
G92075 NA non-coding upstream 48107 1369022 ~ 1651313 (+)
G92221 NA non-coding upstream 76026 1621108 ~ 1623394 (+)
G92083 NA non-coding upstream 84407 1578519 ~ 1615013 (+)
G92247 NA non-coding downstream 33064 1733566 ~ 1752952 (+)
G92248 NA non-coding downstream 43273 1743775 ~ 1777830 (+)
G92257 NA non-coding downstream 103967 1804469 ~ 1830857 (+)
G92274 NA non-coding downstream 252484 1952986 ~ 1953927 (+)
G92275 NA non-coding downstream 259350 1959852 ~ 1960134 (+)
LOC120565410 camk4,LOC102194929,LOC102785978 other upstream 163564 1463719 ~ 1535856 (+)
G92169 dbt,LOC102778223 other upstream 443226 1241387 ~ 1256194 (+)
trmt13 NA other upstream 470741 1220810 ~ 1228679 (+)
G92157 NA other upstream 495374 1202887 ~ 1204046 (+)
G92146 NA other upstream 529374 1168821 ~ 1170046 (+)
G92264 NA other downstream 167150 1867652 ~ 2000993 (+)
LOC120565570 NA other downstream 167219 1867721 ~ 1889087 (+)
LOC120565575 NA other downstream 288306 1988808 ~ 2025931 (+)
G92293 NA other downstream 371680 2072182 ~ 2076104 (+)
G92333 NA other downstream 665397 2365899 ~ 2369672 (+)

Expression


Co-expression Network