LOC120565450


Basic Information

Item Value
gene id LOC120565450
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 2491509 ~ 2492556 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005640251.1
GTTACCGCGAAACTCTACTTGATCCTGGCTGTTGTGGGAGGAGGAAATAACGTAGAGACCCAGTTTCATGATGTGATAAGAGGATTTTGGAGGTTtgtttcctacatttcccagaatgccattCAACAATCCCAGAGGACACACAGTATGTCAACGTCACACCACTGCAAACAAAaatgccattCAATAATCCCAGAGGACACACAGTATGTCAACGTCACACCACTGCAAACAAAGTgagtaaattaata

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005640251.1 True 251 lncRNA 0.43 3 2491509 2492556

Neighbor

gene id symbol gene type direction distance location
LOC120565432 NA coding upstream 29912 2450531 ~ 2461597 (+)
LOC120565428 NA coding upstream 64382 2423987 ~ 2427127 (+)
LOC120565427 NA coding upstream 70904 2412231 ~ 2420605 (+)
dph5 dph5,LOC102795811 coding upstream 419606 2050962 ~ 2071903 (+)
LOC120565574 NA coding upstream 497641 1980838 ~ 1993868 (+)
LOC120565421 NA coding downstream 93959 2586515 ~ 2593983 (+)
LOC120565422 NA coding downstream 329086 2821642 ~ 2840859 (+)
LOC120565437 LOC104954941,LOC104939024,LOC103367594,LOC105940182,LOC103463144 coding downstream 353188 2845744 ~ 2859118 (+)
LOC120565438 gadd45b coding downstream 507064 2999620 ~ 3002539 (+)
LOC120565597 sgta coding downstream 725170 3217726 ~ 3574149 (+)
LOC120565445 LOC101882440,LOC101883177 non-coding upstream 10649 2480418 ~ 2480860 (+)
LOC120565447 NA non-coding upstream 51234 2435416 ~ 2440275 (+)
G92577 NA non-coding upstream 55036 2436213 ~ 2436473 (+)
G92305 NA non-coding upstream 100300 2384646 ~ 2391209 (+)
G92324 NA non-coding upstream 151938 2265267 ~ 2339571 (+)
G92594 NA non-coding downstream 5231 2497787 ~ 2501122 (+)
G92595 NA non-coding downstream 14483 2507039 ~ 2518417 (+)
G92603 NA non-coding downstream 58841 2551397 ~ 2551799 (+)
G92578 NA non-coding downstream 86468 2579024 ~ 2579886 (+)
G92611 NA non-coding downstream 96060 2588616 ~ 2589069 (+)
reep6 reep6 other upstream 111249 2371988 ~ 2380260 (+)
G92333 NA other upstream 121837 2365899 ~ 2369672 (+)
G92293 NA other upstream 415405 2072182 ~ 2076104 (+)
LOC120565575 NA other upstream 465578 1988808 ~ 2025931 (+)
LOC120565570 NA other upstream 602422 1867721 ~ 1889087 (+)
G92575 NA other downstream 41188 2533744 ~ 2582371 (+)
G92770 NA other downstream 489670 2982226 ~ 2983014 (+)
G92773 NA other downstream 518118 3010674 ~ 3094410 (+)
G92782 LOC103461136,LOC106954349 other downstream 633333 3125889 ~ 3132204 (+)
G92826 NA other downstream 859211 3351767 ~ 3464206 (+)

Expression


Co-expression Network