LOC120565654


Basic Information

Item Value
gene id LOC120565654
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 15676410 ~ 15681761 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005640275.1
CAAGTATGTTTTCATCTCAATGTTGGACAAAAAGAAACCTCTACAAGACCAGAGAAGATGTGCTATCACGTGACAAGAGAAGAAGTTAGAGAAGCTAGAGAAGAGAGCAAGTATGAAAAAGCCTCGACTCTGGACAACAGAACGCTGCTGTAAACTGTGACAAGGTGTGCATCCACCTGCGTCACCACAAACCTCACTATCACAGGGACTTCAATGCCACAATAGGAGCAACAACAGTTTGAGGTTCTCAGATTTTTTTAGAGCCGCAATCGAATCCACCATTAGTTAAACGAGGAACACCCCCTAATCTTTAGTGATGAGTGGGTCAGACTTCAAGCAGCCGGGGTAGTTGTAGGAACATGTGACGAATGGAGAAGTACCACATCGTCCCAGAGCAGACTTATGAAGAAGTAAACATGGAGTTGTCCTGCGTTCAGTGGAAAAGGAAATGTGCTGGTTCGAGGCTCGGGGGCCATGTTTTGAAACAGTGACCTCATCCTCACCGCCCACCACCCTTTTCCTGAGAAAAGTCAATCTGACAGACGATGAAGGAGTGAAAGCCGACATCCTCTCTCACTGACAGCAACTTTTACTATCCGACTGTTTTACATGAGAAAAAACCCAttcagaaccacacacacacacacacacacacacacacacacac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005640275.1 True 667 lncRNA 0.46 3 15676410 15681761

Neighbor

gene id symbol gene type direction distance location
LOC120564879 NA coding upstream 154005 15513151 ~ 15522405 (+)
LOC120565844 NA coding upstream 164135 15506857 ~ 15512275 (+)
mpv17l2 NA coding upstream 171189 15498026 ~ 15505221 (+)
LOC120566177 jund,LOC104930914,LOC103360786,LOC101484003 coding upstream 203647 15470647 ~ 15472763 (+)
lsm4 lsm4,LOC106613629 coding upstream 293631 15379515 ~ 15382779 (+)
LOC120564991 NA coding downstream 38428 15720189 ~ 15723206 (+)
gamt gamt,LOC102782137 coding downstream 89532 15771293 ~ 15775561 (+)
LOC120564897 NA coding downstream 206815 15888576 ~ 15896422 (+)
LOC120565334 LOC104959369 coding downstream 308789 15990550 ~ 15994166 (+)
tmem38a tmem38a coding downstream 340816 16022577 ~ 16031978 (+)
G95735 NA non-coding upstream 30366 15639752 ~ 15646044 (+)
G95731 ifi30 non-coding upstream 40463 15634498 ~ 15635947 (+)
G95729 NA non-coding upstream 42842 15632913 ~ 15633568 (+)
G95710 NA non-coding upstream 198253 15474594 ~ 15478157 (+)
G95681 NA non-coding upstream 287268 15387998 ~ 15389142 (+)
G95799 LOC103355525,LOC105938313,LOC101465035,LOC103143843,LOC106944932,LOC103463346,LOC106922741,LOC102200744 non-coding downstream 54191 15735952 ~ 15738435 (+)
G95804 NA non-coding downstream 66649 15748410 ~ 15752090 (+)
G95806 NA non-coding downstream 85002 15766763 ~ 15767010 (+)
G95814 ndufs7 non-coding downstream 98104 15779865 ~ 15785647 (+)
G95830 NA non-coding downstream 132777 15814538 ~ 15821366 (+)
LOC120564959 LOC104946909,LOC103360792,LOC102294988,LOC101486556,LOC102197099 other upstream 43598 15523929 ~ 15632812 (+)
dennd1b NA other upstream 752565 14810368 ~ 14923845 (+)
LOC120565380 NA other upstream 972057 14689382 ~ 14704353 (+)
G95460 NA other upstream 1054997 14619358 ~ 14621413 (+)
LOC120564965 LOC102299696 other upstream 2276666 13390823 ~ 13399744 (+)
kcnn1b LOC104945110,LOC103355562 other downstream 608062 16289823 ~ 16301000 (+)
kdm4b kdm4b,LOC104945107,LOC108234360,LOC108412081 other downstream 638733 16320494 ~ 16376449 (+)
nppc nppc,LOC104932751,LOC103372810 other downstream 2173870 17855631 ~ 17859411 (+)
nmur1a LOC103368681,LOC104952433 other downstream 2964942 18646703 ~ 18665113 (+)
G96418 tsc22d2 other downstream 3100839 18782600 ~ 18785636 (+)

Expression


Co-expression Network