LOC120565827


Basic Information

Item Value
gene id LOC120565827
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 14787068 ~ 14791606 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005640293.1
CTTCTGGAACAGACAAATTGTCAAGACTCCTCATACATAGAGACCAAATGTGACAAAGACAGAAGCCGAAATATACACTGCCATGGGCTTTCGTCGTGCGTTCCAGtgacaaagATTTCCCAGTCAGGGGTTCCTTGGTGCTTGGAGGTCAGGTTGGGACTGCCTGGATTTGAGAACCGTGTCCTATTTGTGAAGAGAGCAAAGCCTGCCCAGTCTGAATAATTTGCTGAAACCCGGATAACGAGCTCATGGTCTCTGCAAGGTCGATGGCTGAAGATTTTGCCATAAAAC

Function

GO:

id name namespace
GO:0009186 deoxyribonucleoside diphosphate metabolic process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005640293.1 True 291 lncRNA 0.47 3 14787068 14791606

Neighbor

gene id symbol gene type direction distance location
abhd8b abhd8,LOC103359436 coding upstream 150014 14624279 ~ 14637054 (+)
ano8b ano8,LOC103359425,LOC104965807 coding upstream 167865 14579027 ~ 14619203 (+)
plvapb NA coding upstream 232148 14548589 ~ 14554920 (+)
babam1 babam1 coding upstream 242540 14537576 ~ 14544528 (+)
si:ch73-61d6.3 LOC107392864,LOC108238350,LOC103359431 coding upstream 288494 14480454 ~ 14498574 (+)
axdnd1 axdnd1 coding downstream 157562 14949168 ~ 14961237 (+)
tdrd5 NA coding downstream 174660 14966266 ~ 14984677 (+)
fam163ab fam163a,LOC102222863 coding downstream 209563 15001169 ~ 15026319 (+)
rabgap1l rabgap1l,LOC106574055 coding downstream 235405 15027011 ~ 15153577 (+)
gpr52 gpr52,LOC104944265 coding downstream 280992 15072598 ~ 15078471 (+)
G95447 NA non-coding upstream 148022 14546536 ~ 14639046 (+)
G95372 NA non-coding upstream 417842 14368922 ~ 14369226 (+)
LOC120565959 NA non-coding upstream 523182 14258285 ~ 14263886 (+)
G95299 NA non-coding upstream 564474 14220571 ~ 14222594 (+)
G95297 NA non-coding upstream 578506 14206339 ~ 14208562 (+)
G95492 NA non-coding downstream 87476 14879082 ~ 14879287 (+)
G95493 NA non-coding downstream 132346 14923952 ~ 14925603 (+)
G95496 crb1,LOC102787887,LOC102294192,LOC103365562 non-coding downstream 138906 14930512 ~ 14932081 (+)
LOC120565370 NA non-coding downstream 430527 15222133 ~ 15268185 (+)
G95640 NA non-coding downstream 504678 15296284 ~ 15297193 (+)
LOC120565380 NA other upstream 82715 14689382 ~ 14704353 (+)
G95460 NA other upstream 165655 14619358 ~ 14621413 (+)
LOC120564965 LOC102299696 other upstream 1387324 13390823 ~ 13399744 (+)
LOC120564964 LOC102797871,LOC101481459,LOC102301033,LOC106675533,LOC102797273,LOC102300313,LOC102200286 other upstream 1404321 13379398 ~ 13382747 (+)
LOC120565776 NA other upstream 1444970 13335734 ~ 13342098 (+)
dennd1b NA other downstream 18762 14810368 ~ 14923845 (+)
LOC120564959 LOC104946909,LOC103360792,LOC102294988,LOC101486556,LOC102197099 other downstream 732323 15523929 ~ 15632812 (+)
kcnn1b LOC104945110,LOC103355562 other downstream 1498217 16289823 ~ 16301000 (+)
kdm4b kdm4b,LOC104945107,LOC108234360,LOC108412081 other downstream 1528888 16320494 ~ 16376449 (+)
nppc nppc,LOC104932751,LOC103372810 other downstream 3064025 17855631 ~ 17859411 (+)

Expression


Co-expression Network