LOC120565916


Basic Information

Item Value
gene id LOC120565916
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 9908907 ~ 9912100 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005640304.1
GGTTCCTTACCCAAAATACATGGTGCACATTGACACCAATCACAAGCTCATCAGATGATGTACCTCAAGGTAGCAGACAACAACTGATCTGATACACACCTGGCATTCTTCAATGAAGCTGTGAATGAGCATGGGTTTCCTCTGAGaGTGAGAGGAGATCACGGAGGAGAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005640304.1 True 173 lncRNA 0.45 3 9908907 9912100

Neighbor

gene id symbol gene type direction distance location
LOC120565621 NA coding upstream 43452 9851125 ~ 9865455 (+)
LOC120565507 NA coding upstream 111918 9785792 ~ 9796989 (+)
hps3 hps3 coding upstream 123767 9766076 ~ 9785140 (+)
fnbp1l fnbp1l,LOC102783810 coding upstream 237119 9614795 ~ 9671788 (+)
LOC120566020 LOC103374322,LOC104940880,LOC103131468,LOC106964853 coding upstream 305332 9589156 ~ 9603575 (+)
fxr1 fxr1,LOC106531534 coding downstream 55254 9967354 ~ 9979742 (+)
sox2 sox2 coding downstream 200882 10112982 ~ 10115322 (+)
kng1 NA coding downstream 528458 10440558 ~ 10450982 (+)
zmat3 zmat3 coding downstream 581429 10493529 ~ 10503066 (+)
LOC120565703 NA coding downstream 631608 10543708 ~ 10553852 (+)
G94373 NA non-coding upstream 6785 9901195 ~ 9902122 (+)
G94266 bcar3,LOC102779191,LOC102207586,LOC101480816 non-coding upstream 215874 9691929 ~ 9693033 (+)
G94259 NA non-coding upstream 229170 9662132 ~ 9679737 (+)
G94238 NA non-coding upstream 357216 9547714 ~ 9551691 (+)
G94231 NA non-coding upstream 367848 9540537 ~ 9541059 (+)
G94400 NA non-coding downstream 69322 9981422 ~ 9983844 (+)
G94405 NA non-coding downstream 271094 10183194 ~ 10183408 (+)
LOC120565491 NA non-coding downstream 292040 10204140 ~ 10297258 (+)
G94426 NA non-coding downstream 427136 10339236 ~ 10405233 (+)
G94427 NA non-coding downstream 434097 10346197 ~ 10358788 (+)
G94376 NA other upstream 5718 9902285 ~ 9903189 (+)
G94281 NA other upstream 29709 9817621 ~ 9879198 (+)
LOC120565620 NA other upstream 62632 9844271 ~ 9846275 (+)
G94239 NA other upstream 351339 9552296 ~ 9557568 (+)
LOC120566011 NA other upstream 365372 9384505 ~ 9543535 (+)
ttc14 ttc14 other downstream 21513 9933613 ~ 9948237 (+)
LOC120565490 NA other downstream 73619 9985719 ~ 10159881 (+)
atp11b atp11b other downstream 451362 10363462 ~ 10414826 (+)
G94598 NA other downstream 1004825 10916925 ~ 10941244 (+)
si:ch211-162e15.3 LOC103376230,LOC100712485,LOC108238459,LOC102795316,LOC102207055 other downstream 1034832 10946932 ~ 10948316 (+)

Expression


Co-expression Network