Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC120565971 |
| gene name | NA |
| gene type | non-coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053120.1 |
| NCBI id | CM020917.1 |
| chromosome length | 41568296 |
| location | 38936151 ~ 38943212 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005640312.1 | True | 452 | lncRNA | 0.49 | 3 | 38936151 | 38943212 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC120564938 | NA | coding | upstream | 15140 | 38907586 ~ 38921011 (+) |
| sgcb | sgcb | coding | upstream | 28784 | 38901833 ~ 38907367 (+) |
| scfd2 | scfd2 | coding | upstream | 93480 | 38719919 ~ 38842671 (+) |
| lnx1 | lnx1 | coding | upstream | 254755 | 38636809 ~ 38681396 (+) |
| kdr | kdr | coding | upstream | 525934 | 38379216 ~ 38410217 (+) |
| fryl | fryl | coding | downstream | 8358 | 38951570 ~ 39014780 (+) |
| palld | palld,LOC102787062 | coding | downstream | 132085 | 39075297 ~ 39130840 (+) |
| fbxl5 | fbxl5 | coding | downstream | 259636 | 39202848 ~ 39211764 (+) |
| ndnf | ndnf | coding | downstream | 352124 | 39295336 ~ 39306238 (+) |
| slc34a2b | LOC106512275,LOC107396065,LOC108240151 | coding | downstream | 535641 | 39478853 ~ 39487478 (+) |
| G101289 | NA | non-coding | upstream | 63973 | 38871935 ~ 38872178 (+) |
| LOC120565661 | NA | non-coding | upstream | 78069 | 38855904 ~ 38858082 (+) |
| G101278 | rasl11b | non-coding | upstream | 88607 | 38845284 ~ 38847544 (+) |
| LOC120564886 | NA | non-coding | upstream | 383847 | 38534565 ~ 38552304 (+) |
| G101245 | pdgfra | non-coding | upstream | 421320 | 38514372 ~ 38514831 (+) |
| G101365 | NA | non-coding | downstream | 73499 | 39016711 ~ 39017673 (+) |
| G101364 | NA | non-coding | downstream | 75168 | 39018380 ~ 39023580 (+) |
| G101427 | NA | non-coding | downstream | 235032 | 39178244 ~ 39178746 (+) |
| G101437 | NA | non-coding | downstream | 246854 | 39190066 ~ 39190781 (+) |
| G101464 | NA | non-coding | downstream | 335440 | 39278652 ~ 39278953 (+) |
| usp46 | usp46 | other | upstream | 55546 | 38866435 ~ 38880605 (+) |
| G100843 | NA | other | upstream | 1446079 | 37463914 ~ 37490072 (+) |
| prrc2c | NA | other | upstream | 1977791 | 36932655 ~ 36958360 (+) |
| G100671 | NA | other | upstream | 2237282 | 36695437 ~ 36698869 (+) |
| sass6 | sass6,LOC102776185 | other | upstream | 2324405 | 36596041 ~ 36611746 (+) |
| prdm5 | prdm5 | other | downstream | 380372 | 39323584 ~ 39361733 (+) |
| LOC120565708 | LOC103369944,LOC100698021,LOC101482931,LOC102791229,LOC102291415,LOC102212992 | other | downstream | 510908 | 39454120 ~ 39464450 (+) |
| reps2 | reps2,LOC102792668 | other | downstream | 617849 | 39561061 ~ 39592762 (+) |
| LOC120565298 | cdkl5,LOC103356958 | other | downstream | 750700 | 39693912 ~ 39740277 (+) |
| atp10a | atp10a | other | downstream | 1571881 | 40515093 ~ 40559895 (+) |
