LOC120566054



Basic Information


Item Value
gene id LOC120566054
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 7394373 ~ 7395278 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>XR_005640327.1
CTTTCCACGTCGTCTTTATTGACAGACGGAATTAAAGCGAAACACCTATATCCTATGGATGATCTGCTGGGTGTCACACATAATCTGGCATCCGACTAGAAAGTAACCTAACTCCTGAGCTTTTTTTGTAAACGCCTCCGATCCCCTCTGCCTGTCAGTGCGTCTGAGCTGTGTGCCACACGCTGAaccacacacaggaacacaacaCAAAGACCACAAAGACGACAAAGCCGGGCTAAAAATACCTCGATGTGTTGAAGATGTAGGCCTAGCAGAATTTA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XR_005640327.1 True 281 lncRNA 0.47 3 7394373 7395278
Loading

Neighbor


gene id symbol gene type direction distance location
LOC120565797 slc22a23,LOC102794535 coding upstream 15029 7353848 ~ 7379344 (+)
LOC120565613 NA coding upstream 108614 7263547 ~ 7285759 (+)
igfbp3 LOC103358919 coding upstream 267101 7108149 ~ 7127272 (+)
si:ch211-191a24.3 LOC103358916 coding upstream 326439 7007170 ~ 7067934 (+)
si:ch211-191a24.4 LOC104966872 coding upstream 423073 6965547 ~ 6971300 (+)
LOC120566053 dusp22 coding downstream 2860 7398138 ~ 7413692 (+)
LOC120566212 irf4,LOC104941070 coding downstream 20163 7415441 ~ 7423820 (+)
foxq1b foxq1,LOC104946962 coding downstream 184914 7580192 ~ 7581837 (+)
foxf2b foxf2,LOC102792585 coding downstream 190863 7586141 ~ 7590299 (+)
LOC120564954 foxc1,LOC104932399,LOC104963658 coding downstream 208182 7603460 ~ 7605630 (+)
G93933 NA non-coding upstream 66687 7327171 ~ 7327686 (+)
G93932 LOC103399850 non-coding upstream 70947 7322066 ~ 7323426 (+)
G93931 NA non-coding upstream 72918 7318842 ~ 7321455 (+)
G93912 NA non-coding upstream 107220 7271936 ~ 7287153 (+)
G93906 NA non-coding upstream 158654 7233146 ~ 7235719 (+)
G93985 NA non-coding downstream 129712 7524990 ~ 7525343 (+)
G93986 NA non-coding downstream 161976 7557254 ~ 7615427 (+)
LOC120565893 NA non-coding downstream 496946 7892224 ~ 7895718 (+)
G94056 LOC104961454 non-coding downstream 558137 7953415 ~ 7955102 (+)
G94057 NA non-coding downstream 596010 7991288 ~ 7991555 (+)
G93938 NA other upstream 43786 7349810 ~ 7350587 (+)
rhpn1 rhpn1 other upstream 1012775 6354892 ~ 6381598 (+)
G93638 NA other upstream 1180356 6202085 ~ 6214017 (+)
G93613 NA other upstream 1342853 6035369 ~ 6051520 (+)
trmt1l trmt1l other upstream 2681140 4685224 ~ 4713233 (+)
LOC120565294 pycrl other downstream 483641 7878919 ~ 7890177 (+)
LOC120565614 NA other downstream 500867 7896145 ~ 7905247 (+)
G94073 rgs5,LOC107393027,LOC104951458,LOC100708109,LOC105932873 other downstream 842092 8237370 ~ 8286436 (+)
G94199 LOC103367571,LOC102312400,LOC100710958,LOC101467655 other downstream 1751884 9147162 ~ 9168877 (+)
LOC120566011 NA other downstream 1989227 9384505 ~ 9543535 (+)

Expression


LOC120566054 Expression in all Baseline Samples

Bar chart with 13 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 4.
End of interactive chart.

LOC120566054 Expression in each Bioproject

Bar chart with 5 bars.
LOC120566054 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 4.
End of interactive chart.

Co-expression Network