LOC120566147


Basic Information

Item Value
gene id LOC120566147
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 28992228 ~ 28992610 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005640343.1
gttcatcaGCAGGGACGTGGCTCTACAGGCATTACCAGGCACACCTGACATCCATTTACAATCAAGCTCAGTACAAGAAACCTGGCTCTCCACTCACTCATCGCCCGGCTGTTTTCCGCTCTCCATGTGCACCTGCCAGAACTGAGTCTGCCTTCCTGCTGATCCTGTGCCACTGCCTGCCACAAACTGCTCACCACCAGACCCCACCTGCTTTCACCGGGATTGTCTCCTCACCACCTTGATTAACTCTCTCTTACTTGAAAGTACTGCGATAAAATAAAACTTCTAACTACAA

Function

GO:

id name namespace
GO:0005743 mitochondrial inner membrane cellular_component
GO:0044455 obsolete mitochondrial membrane part cellular_component
GO:0019866 organelle inner membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005640343.1 True 295 lncRNA 0.51 2 28992228 28992610

Neighbor

gene id symbol gene type direction distance location
dtymk dtymk coding upstream 25645 28959154 ~ 28966583 (+)
agxta agxt,LOC102212595,LOC102798621 coding upstream 33132 28953375 ~ 28959096 (+)
fam20b fam20b,LOC102783880 coding upstream 105170 28865643 ~ 28887058 (+)
echdc2 echdc2 coding upstream 237206 28746989 ~ 28755022 (+)
mmachc mmachc coding upstream 328950 28659938 ~ 28663278 (+)
hdlbpa hdlbp coding downstream 50294 29042904 ~ 29065102 (+)
sox14 sox14,LOC101484987,LOC103365676,LOC104926635,LOC100695210 coding downstream 273752 29266362 ~ 29268436 (+)
LOC120565897 cldn18 coding downstream 333907 29326517 ~ 29331778 (+)
hs2st1b LOC103365674,LOC100712187 coding downstream 359792 29352402 ~ 29373466 (+)
lmo4b lmo4 coding downstream 429769 29422379 ~ 29436496 (+)
G99189 NA non-coding upstream 20142 28970487 ~ 28972086 (+)
G99108 NA non-coding upstream 304110 28687882 ~ 28688118 (+)
G99007 hook1,LOC102781169,LOC106584290 non-coding upstream 421370 28569648 ~ 28570858 (+)
LOC120565132 NA non-coding upstream 532018 28449543 ~ 28460210 (+)
G98972 NA non-coding upstream 673340 28312594 ~ 28318888 (+)
G99217 NA non-coding downstream 26925 29019535 ~ 29034406 (+)
G99238 NA non-coding downstream 164074 29156684 ~ 29157107 (+)
G99261 NA non-coding downstream 445552 29438162 ~ 29438722 (+)
G99292 NA non-coding downstream 600755 29593365 ~ 29593623 (+)
G99299 NA non-coding downstream 702997 29695607 ~ 29695933 (+)
ralgps2 ralgps2 other upstream 126741 28775375 ~ 28865487 (+)
LOC120565530 LOC100702602,LOC101154857,LOC107096371,LOC105928898,LOC101076602,LOC108230771 other upstream 217675 28772362 ~ 28774553 (+)
LOC120564865 NA other upstream 845903 28137269 ~ 28146325 (+)
pip5k1ca pip5k1c,LOC106917759,LOC106949671,LOC107393349,LOC103370870 other upstream 907841 28027964 ~ 28084387 (+)
ncanb ncan,LOC104966594,LOC107554802 other upstream 1159373 27659696 ~ 27832855 (+)
G99297 NA other downstream 671023 29663633 ~ 29665090 (+)
si:ch73-389b16.1 ccdc18 other downstream 1434893 30427503 ~ 30429291 (+)
G99545 NA other downstream 1817908 30810518 ~ 30811236 (+)
slc1a7b LOC103368436,LOC102788729,LOC102303821 other downstream 2103271 31095881 ~ 31302827 (+)
LOC120564930 NA other downstream 2621279 31613889 ~ 31643446 (+)

Expression


Co-expression Network