trnap-cgg_3


Basic Information

Item Value
gene id trnap-cgg_3
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 41225091 ~ 41225162 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>unassigned_transcript_390
ggctcgttggtctaggggtatgattctcgcttCGGGTGCGAGAGgtcccgggttcaaatcccggACGAGCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_390 True 72 tRNA 0.63 1 41225091 41225162

Neighbor

gene id symbol gene type direction distance location
bcl6aa bcl6 coding upstream 119343 41086373 ~ 41105748 (+)
zbtb11 zbtb11 coding upstream 477714 40737734 ~ 40747377 (+)
dpt dpt coding upstream 502256 40715933 ~ 40722835 (+)
nme7 nme7 coding upstream 541849 40657846 ~ 40683242 (+)
LOC120564870 bivm coding upstream 574261 40643959 ~ 40650830 (+)
trnap-ugg_3 NA coding downstream 472 41225634 ~ 41225705 (+)
im:7152348 NA coding downstream 1448 41226610 ~ 41227656 (+)
zgc:103559 LOC104941656,LOC108241179 coding downstream 302239 41527401 ~ 41533655 (+)
G102022 LOC106527457,LOC108240210,LOC103354232,LOC107088662 non-coding upstream 68051 41156552 ~ 41157040 (+)
G102021 NA non-coding upstream 68624 41154922 ~ 41156467 (+)
G102006 NA non-coding upstream 110856 41111573 ~ 41114235 (+)
G101990 NA non-coding upstream 284774 40860037 ~ 40940317 (+)
G101832 NA non-coding upstream 715724 40508891 ~ 40509367 (+)
G102081 NA non-coding downstream 6505 41231667 ~ 41234402 (+)
G102189 NA non-coding downstream 286822 41511984 ~ 41512370 (+)
atp10a atp10a other upstream 665196 40515093 ~ 40559895 (+)
LOC120565298 cdkl5,LOC103356958 other upstream 1484814 39693912 ~ 39740277 (+)
reps2 reps2,LOC102792668 other upstream 1632329 39561061 ~ 39592762 (+)
LOC120565708 LOC103369944,LOC100698021,LOC101482931,LOC102791229,LOC102291415,LOC102212992 other upstream 1760641 39454120 ~ 39464450 (+)
prdm5 prdm5 other upstream 1863358 39323584 ~ 39361733 (+)
G102165 NA other downstream 227512 41452674 ~ 41453306 (+)

Expression


Co-expression Network