G102309


Basic Information

Item Value
gene id G102309
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 383449 ~ 388245 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU137748
TTGGGCGAGCTGGTGTACGGGTAGTAGTCCGACTCTGACTGGGTGTATGGCTCAGGAGAGGAGGTGGACAGTCTGGAGGATCTGAGGATGTCCTCGCTGGTCCTGCTTTTGGTGGCTGTGTCCACATGATTGTCTGTGAAGAAATGGATCAAGTTAGGAGAGAAAACCCCCCAGATAGGATCAAAGTAAGTGGTCATTCTGTTAAAGCAATAGTttcacattttgggaaatacagtatgtttattcacttttttgccaagagttagatcagaagatcgataccactctaaCAAATATACATTTGTCCGTTTAATATTGAGATACCGTATAGAGactgttagcttagcatagcataaagactggaaatgaGGAAAGAGCTAGCCTGTTGCtgtcaacaaagaaaaaaaatgcttatCAGTATCTCAAAAGCTCACAAATGAacacattatacctaatttgtTTAATGCATACAAAACAGAAGTGTCAAAATAACAAGTTGTGGTTTTAGCCATGAGCAGCGACTTTCTGCATTCTCCGCTATCTACCTGGCAACGTCACGGTGACGAGACAAGACTCCTGGAAGTCACTGTGCCCTGTTTGTGTatgaattaaacaaacaagatataatatGTTAATTCATGACGTTTAGAGATGATGGTCTCCAGACCTAGCTACCTTTTTACAGAGCCAGGCTATCTGTTTCCCCCACtctgtatgctaagctaagctaactgtctcctGGCTCCAGCTTCATGTGGAATACagattgtgtgtggtgtcaatTTAGTACTCAACAAGAATGTGAATAAGCcaatccaaaatgtcaaactataccTATGAGGAGAAAAATGTGTTAATAAATATCACAAGAGTACATTTACACAGTCAACATATCCACCATTCCTGTCAGAGGAGATCAGTATTTCAGCCAACTGCATGACAATGACCAGCACTAACATTAGTTCAGTTACTGCTCAGCCTGAGGCACACGGTGCTTTCATGAGCGGTGTGAGGCGATGATATTGATGCCACTCTGCACTAAAGCACAGtcaatgggagtcaatggatgTGACATGCAGTGTAATTTCAGATAGATCGCTCTTCACTCTGTTAGCCATTAGCCATGCCGGCCCCGATCCATGATCCATTGAATTCCTATGCACATGATGCATGACACCGATGGCAGACATTCTCATCTCTGGGACACACACTTTCAGCTTGATGACAGGGCAagccgccacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacatccattatTCTTCTTCATTAGTCAAATGTATCTGGCTGTCAGTGCTGCGGTGGTCCCCTCAACCATTCAGTTTGACAGCAGATTGAAATTTCTGTCAGAGAAAATATGACTGTGCCATATTGACATGGGAtgacaaacagaaagagagatacatacacacactcacacacagagatatgCAATATCTATCTACCGGCATTGAGTGAAACAGCGAGAGGAGGGAGATACTTACAGTGGCAAGGTCACCGGGTAAGGTGAAGCAGAAGGTGGAGGGAAGTGAATAAAAGTGATTGgatgcaataaaaaaagaggtaaaaagaaaagggaaaaattATTGGAACGTCCCCAAGAGAGAAGTGACAATATGAGAGCTTCCATATGGAGAACAAGGACCAAGCCACCGAGACCTTTTCTATACAGCTGAGTAGTACATAACAGGCCTTTGAtgcacacagcaacacaacttcACATGTGGCTTTAGATTTACATCAATCCTGTTAAGtgctaaaacagaaaaacataatCAATTGCTGTTTAGAAGGACATAAAGTACGAGAAGGATCAACACTGTTGTGTTGTGACTGTTGTTGAAGTGTGTGCAAAATGTTGGTATTAAAGGTTTTTGAACTTGCCATTTACTTTATTCTTCAGAGgcaaaaatgtgtattgtaaaCATGATGGCCAGTGATGTACTAATTATAGCTAAGACATATGGAAGGGGGAAAGTGTCtatacacacatccacacagttTAATAACTACCCCAAAaataccaacacacacagtaacatgcAGGACAAGAACAAAGATAAATTATGCTCCTGCAGGAGGTCTTAGATCTTGTGACTCTCAGCTGAAAAGCATTTTCCAGTGTGATGTGACAAGGGGATAGAGAATCTTTTTTCTTAGGAATGTTATACTGAAGCACACTATCCAGATGGCTGAATTGCATTTCAGTTCActgacttgtaaaaaaaaaaaaatatcttgaaATAGCATCTTGTGTTAACCTCGCTGCTGTAGAGTATTTGATTGAATGACAACATAATTCCACACAAGAAATCAGACTTCTGTCTCACGTACtctgttttcaataaaaaaaaaaaaacaagcaacacAACAGATGTGTCTGAAGTCAAACAGTTACAATTACAGTACATCTTAAATCACACACTGACCACTGGTTAACTAGGCTAGGCTGAGTCTCCacagcaaatataaattccagTTATAATACAGTTTTCCACTGTGCTTTGTGCCGTTGTTCTGTTCTATTCCGGTGAATTGTGTGTCCTCAGAGTCCCATGTACTCAACACTTGTCACGCCTGAGCAACCTTCACTTCATTCAGGGTCTGTTCCAGCCCCTTTTGCCGACAAGAACCTGTCGTGCTGCAGGAGCTGCACGCAGAAGCAGGCATGTGCTTGTGGCATGCGCACTAAACATTGCTCTTTTGCATTGGGCCAGTTACCAATGCAATAAGTCTAATTGATCTTCATcttcaataaaaataaagttgtacAAGTCAAACTCTATTTCCTTTGTGCATTTTTAAGCACATAGTCAATATTTTCCATTTGTCTGGTTTTGTTAACGAGGGCTTCATTTTTCTATGACAACTGGAGCATCAATAGTAATAAATGCCAAATCACAGCTGTTAAAAACATCAATAGGTCAGTAAAAACATCTACATGGAGTACTCTAACACAAAATGACTAAACTGACAAGAGGACAGGCAGGCTAAGGCGGGGCTAACTGCACTGTACCCGTTCTCGAATAGATGGGAGGCTTCCTGTAGATGTTGGGGTCCCCTGTGgctgaggagagaaagaggagatggagaggTGAAACATGGAGGAGTAAAGGAGGAGAGGATGTGACTTTTCTGTCGGGATGATCGGAAGGGGAAAGATGGAGGTAGGAAGGATGGTTGTAAAGAAAGGTAAAGATGCAGTATGAGGGGGAGAATGCGCCAGAGAaatgatgtacagtatataaatacgACTTAGTCACATGTTCACACACTCTGATTCCCATGGAACTTAAAATGAATGATTTGCATTCGTGAGTAAGGGCAGATGAAATCTTCCACGCTTAGTAAAAAATCTATGAGATTGACAGTGGTGCAATGAAGAGATGGGGAGTCCTACCTGGTACATGAAAATGTTTAGGGGGCTGGTTTGTGGTAGGTGTGCTTGACCGCCCCTCTTGGCCGTAATAAGGTGAACTCCTGCCACTCTCAGAGCCTGCAGCCAgcAGGGTAGGCATAGTGCTGCGGAGAGCGAGGCATGATGGGTGACATGCCTTGGCGACTATATGTCGGCGAGTCAATATAACCTGGACTGGAGCACCGCCTCTGCTTTATATCCAGGCTGTCGTAGTCCTGAAAAGATAAAGGTGAggtaaaagttgaaaaaagagcAGGGGGCAACAGGGAGCACTTGTCTTAAGTGCTCTGCTGTGGAGCATGCTTACCTGAGAATAAGGAGAGAGTGTCCTAAGTGACTGGAGAATCAGTGGAGAGAGAAGAGTTACCATTTATACTTTAGCACCGTggtgaaacaaaaacaatatttcatatttcatgTATGTACAGAATTGCAAGAAAAGACCGGACAGTCAATCAACCAAACTCAATCTATGTTTTGTTTAATCCTACATGGATGATTGGTGGGGGTTTATGCATGGGACAAAGTGATGACCACTGTAcataattattt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU137748 True 4046 lncRNA 0.42 2 383449 388245

Neighbor

gene id symbol gene type direction distance location
sh3tc2 sh3tc2,LOC104962816 coding downstream 47407 311932 ~ 336042 (-)
il12ba NA coding downstream 187008 193931 ~ 196441 (-)
ebf1a ebf1,LOC107086402,LOC101162765,LOC103154059,LOC100707015,LOC106955421,LOC101066888 coding downstream 196099 133516 ~ 187350 (-)
clint1a clint1,LOC101486650 coding downstream 274971 86409 ~ 108478 (-)
thg1l thg1l coding downstream 301325 68090 ~ 82124 (-)
LOC120567031 LOC100705418,LOC101464828,LOC102297141 coding upstream 35688 423933 ~ 429855 (-)
foxi3b foxi1,LOC103355701,LOC103470887,LOC105917079,LOC103132071,LOC106937269 coding upstream 57388 445633 ~ 447959 (-)
lcp2b NA coding upstream 63843 452088 ~ 456219 (-)
LOC120567087 LOC103355704,LOC104949036 coding upstream 70375 458620 ~ 460571 (-)
LOC120567100 LOC104949038,LOC103355705 coding upstream 72678 460923 ~ 463027 (-)
LOC120567446 NA non-coding downstream 151993 230377 ~ 231456 (-)
LOC120567447 NA non-coding downstream 154010 227228 ~ 229439 (-)
G102273 NA non-coding downstream 173007 210129 ~ 210442 (-)
G102240 NA non-coding downstream 316436 65234 ~ 67013 (-)
G102241 NA non-coding downstream 318950 64025 ~ 64499 (-)
G102341 NA non-coding upstream 100053 488298 ~ 488647 (-)
G102343 NA non-coding upstream 112223 500468 ~ 500682 (-)
G102345 NA non-coding upstream 170486 558731 ~ 559029 (-)
G102346 NA non-coding upstream 171616 559861 ~ 560236 (-)
G102349 NA non-coding upstream 186747 574992 ~ 575259 (-)
G102276 NA other downstream 152005 220592 ~ 231444 (-)
tmsb2 NA other upstream 78045 466290 ~ 468450 (-)
insb LOC101469513,LOC102789752 other upstream 450701 838946 ~ 841618 (-)
sh2d1aa sh2d1a,LOC102800107 other upstream 1788622 2176867 ~ 2197918 (-)
slc7a2 slc7a2,LOC102301583 other upstream 2337215 2725460 ~ 2740487 (-)
pabir2 LOC104944540,LOC105929195,LOC106528854 other upstream 2502725 2890970 ~ 2898545 (-)

Expression


Co-expression Network