G102606


Basic Information

Item Value
gene id G102606
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 1552513 ~ 1552989 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU138113
AGGATGGATGGGAGACtttgggaagggggggggggtcacgaCTGCTGTTTTCCAAAGCAGTGGAACTACCTGAGTGTCCATTGAGCGCTGGAAGAGGGAACATAAAATTCCACTTAATTGGACCACACAGTGCTTCAGCACTCTGCCTCCAATGTTATCCGGCCCCGGACTCTTCGGCACATTAGTCTTCTCAAACACTCGCTGGACCATCTCCTCCGTAATAATCAAAGTGCTCTCCATCTCAGCATCGTCTATTACAGTCTGTTGCCAAGCAGAGACATTGTCACTGTCATTTATTTCAAAGCGGGTAAAATGTTCATTTAAGTTGTTGGCCAGAGCACGGGATGCTGTGTCCTCCATGAAATCATTTTTTTCCCTGTCTTGAAGGGGGCGTTGGCCATCAACTTTATACCAGTCCAAGCAGCCCTTGAATTCCCCGCAGTACTCTGTACCTTGTCCTTGTACTGACACCTGGCC

Function

GO:

id name namespace
GO:0004175 endopeptidase activity molecular_function
GO:0004197 cysteine-type endopeptidase activity molecular_function
GO:0008233 peptidase activity molecular_function
GO:0008234 cysteine-type peptidase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU138113 True 477 lncRNA 0.49 1 1552513 1552989

Neighbor

gene id symbol gene type direction distance location
eif4ebp3l eif4ebp3,LOC102306235 coding downstream 1886 1546383 ~ 1550627 (-)
LOC120566654 NA coding downstream 12021 1529411 ~ 1540492 (-)
med7 med7 coding downstream 770721 779637 ~ 781792 (-)
lonrf1 lonrf1,LOC103354679 coding downstream 774190 753522 ~ 778323 (-)
LOC120567100 LOC104949038,LOC103355705 coding downstream 1089486 460923 ~ 463027 (-)
nxt2 nxt2 coding upstream 21403 1574392 ~ 1576708 (-)
LOC120566744 NA coding upstream 196784 1749773 ~ 1767408 (-)
LOC120566745 LOC102312462,LOC100702004,LOC101465591,LOC103361369 coding upstream 215549 1768538 ~ 1783651 (-)
LOC120567293 NA coding upstream 238639 1791628 ~ 1795122 (-)
arhgef9a arhgef9,LOC102797990 coding upstream 246415 1799404 ~ 1862112 (-)
G102573 NA non-coding downstream 287311 1264792 ~ 1265202 (-)
G102487 NA non-coding downstream 344785 1207326 ~ 1207728 (-)
G102485 NA non-coding downstream 349957 1202073 ~ 1202556 (-)
G102467 NA non-coding downstream 583454 964250 ~ 969059 (-)
G102463 NA non-coding downstream 646272 905928 ~ 906241 (-)
G102607 NA non-coding upstream 338 1553327 ~ 1553542 (-)
G102609 NA non-coding upstream 2867 1555856 ~ 1556436 (-)
G102621 LOC104967683 non-coding upstream 40846 1593835 ~ 1601535 (-)
G102638 NA non-coding upstream 81605 1634594 ~ 1662199 (-)
LOC120567184 NA non-coding upstream 383584 1936573 ~ 1937187 (-)
insb LOC101469513,LOC102789752 other downstream 710895 838946 ~ 841618 (-)
tmsb2 NA other downstream 1084063 466290 ~ 468450 (-)
G102276 NA other downstream 1321069 220592 ~ 231444 (-)
sh2d1aa sh2d1a,LOC102800107 other upstream 623878 2176867 ~ 2197918 (-)
slc7a2 slc7a2,LOC102301583 other upstream 1172471 2725460 ~ 2740487 (-)
pabir2 LOC104944540,LOC105929195,LOC106528854 other upstream 1337981 2890970 ~ 2898545 (-)
LOC120567496 NA other upstream 1343182 2896171 ~ 2896313 (-)
guf1 guf1,LOC102797887 other upstream 2071170 3624159 ~ 3642640 (-)

Expression


Co-expression Network