XLOC_004695


Basic Information

Item Value
gene id XLOC_004695
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007123.7
NCBI id CM002896.2
chromosome length 49182954
location 22017946 ~ 22019770 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00010926
CTGTGCTCGCCTCACGAGCGACCTGTTGCTCCGCCTCACGCCCAGCCTGTTGATCGGTGGACGGGTAAGCGCGCATGGCATCGGAAGGAGCTCGAAAAGTATAAGGTAACTAATGAAACTAACGTGAAGCATGTTTGATGAccactttataaacacaacacctaggataatttaggagctttttattgtaataaaatgccttttgaatgacacagatttttatgttggctaggtgatgacagtaagtaacgtTACTGTGATTTGTGATCTTTCTGGGGTGTTAACTGTAAAGCAGTAAGTAGTATTTTTACTCTTGTATTTCTTAATGTTGTTCATGGATTTTTGTGACAATACTTTGATGCATAAGTGTTGAATTCAGcttctaacaatgttttttttaatcaaaatatatacaatacttGTCCTGCTCtgcatgtacattttgtttagctgtacatctgtacattgaatagcaaatgttattaatttactatgagcattttacattctagACGTGATTTGAGCTATCTTTAATTAATCCTGTATGTAAGGGTCGTTTCATGCTAACGGAAATGTCTGAGCTAAGGCTAATTCCAACCTAATCATCTTcaactgcaaaaagaaaaagtttgaccACCGTTTTATGTGACACCCtggataattattatcatttaggagtatttttgtgatatagtgacttttggctaacatgatctttttttacttaattttgcttAAACGCTTTTATCTGTTATTCTTTTTTCAGGTGGATAATTGCGtgaaaatcaaactaaaagaatGCAATCTTGAGGAGTTAATCACCACATttgaaggtatgtaataatattttacttggttcattgtaatcattagggctgcccttgtctaaacatttgtctggttgacttgtgatgttcatttgaagcattagttgaataattacagatttattaataaaccatttattcattaattcattttctttttgactcagtccctttattaatctggggtcgccacagcggaatgaaccgccaacttatccagcatattttttacacagcggattcatgcagcatacattgactttgccagtgtggacttttttttctgcaactagtgggtagcacattcgcctcatagcaacaaggtcacttgatcgatccttggctgggtcaataggcctttctgtgtgaagtttgcatgttctccccgtgttcgcgtgggtttcctccaggtgccccggtttccaaagacgtggtaaaggtgaattaagtagactaaattgtcaatggtgtatgtgtgtgaatgagtatttgtttcccagtgatgggttgcagctgaaagggcattcgctgcataaaacttatgctggatatgttggtggttcattccattgtggttaccccagattaataaagcgacaaagctaaaaagaaaatgaatgaatgaataataaatttttagttgACTAATGGTTATTCAATTATTAGGGGGCAGCCCTAGTAATCATTAGCCACTTCAACACTTTAAACTGAGAGATTAAACTCAAATGCCAATTTGTCTTTGTctggttatttttaaaaatctgctgttcatgcaaccagtgacattctcttgttttatttttagcacagGAGCGAACCTTTCCTCGTTTTTAGGTCAATTTGAATACAATTCAGAGGGTAAGGATTCAATTAAAGGTTTCTCGATGcataatgatgcatttaatgcataatgattgtcttagttattttattaacaatgaaaatgttatttttatgtttgttattagggtggcatgggggcgcagtgggtagtgctg

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00010926 True 1825 lncRNA 0.36 1 22017946 22019770

Neighbor

gene id symbol gene type direction distance location
XLOC_004694 NA coding upstream 218550 21757817 ~ 21799396 (+)
XLOC_004693 pkd1b coding upstream 269938 21697540 ~ 21748008 (+)
XLOC_004692 mrpl27 coding upstream 329859 21684239 ~ 21688087 (+)
XLOC_004690 ca10a coding upstream 464309 21298317 ~ 21553637 (+)
XLOC_004691 FO704814.1 coding upstream 580488 21437346 ~ 21437458 (+)
XLOC_004696 NA coding downstream 239192 22258962 ~ 22304841 (+)
XLOC_004697 hdlbpb coding downstream 384338 22404108 ~ 22445061 (+)
XLOC_004698 polr2a coding downstream 540297 22560067 ~ 22573297 (+)
XLOC_004699 capgb coding downstream 556634 22576404 ~ 22618080 (+)
XLOC_004700 CR925753.1 coding downstream 558634 22578404 ~ 22578530 (+)
XLOC_004689 NA non-coding upstream 910959 20806897 ~ 21106987 (+)
XLOC_004679 NA non-coding upstream 1513145 20491619 ~ 20504801 (+)
XLOC_004675 NA non-coding upstream 1752481 20263585 ~ 20265465 (+)
XLOC_004701 NA non-coding downstream 598618 22618388 ~ 22619122 (+)
XLOC_004707 NA non-coding downstream 1017677 23037447 ~ 23040091 (+)
XLOC_004708 BX927205.1 non-coding downstream 1090393 23110163 ~ 23110277 (+)

Expression


Co-expression Network