G104050


Basic Information

Item Value
gene id G104050
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 8859061 ~ 8875429 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU139843
aaagaagaaatatttttattattatcagatatatacactgcatagaacgaaaaagcatcaatctagctgagatgagatgtgaaatatattaggtgaaaagaatgggtctgaacaagaagaaagagaggaaagagagagagaaagagagaagaaaggagagcaggagagaagagacgagaagagagaagagagaggggagaaagagaataaagagagaaggagagagagaggaaagagaggagaggaaaagaaagacagcaactttgactaaaattgcctaaaaaggctgaaagtttaaagactttgtattattatcagccatatccattgggtagaacaaacaagcatgaccctaaagagctgagaggtggatatattggctgaaaagaaacggcctatatacatggatgaaatcacaaatgaccctggagggagagacagaagaaggaagggagagagggagtgaaagagaggaagggatggagagagagagacagacagagaaggagtgatggaaggagagagacattgagaaggatggagggagggagagacagagggagggagacacagagggatggagagacagagggagggagactaaaggaaggaaagaggggaacagtggagggaggaagacagagaaaagagaaaggagggagggaggcatagagaaagagagggagaaaggagggagggagacagacagataaggagacagacagacagacagacagacagaagtggaacacaAATGATAtagcctgatgatcatagttagtctagttagttgactcctacagcaagcctggagtaatcagtagactgtctgtgaaagggttgtcatggttactaagagcctggccatgtttataaacatctctttgatctgataacgatagcacctggtcttaatatgtctcctgtagcacaccgcagcacttcagacactgagagcaagctctcaaacaaagcctcacagtggaaaaaccataactgctatcagtcaaatgacgtgatcctgagcaccacaaggcctttgtgaacgtatcggtataaaatttatatggataaacgtaaaaatgtggtcatatcagcgatttcaaaaagtggtttgttcagtgtttcgctgggaaatatccaggagtttgatcattggagtcaatggagaacgatatggagatcttgtcatttggaagctcaaccagccaaaagtaaaaggcgtatcacaaaactgagcagattttctgaaactagacaaaaatacctacgttttgatgtataaattgtgtatgccaAGTAGagattgtgggcgtgagagcaatttgagaagaagggacaaagataattttttcgaagcttcaccctctagctatgacatcatccactctagctcacgcaatacacactctgtttaatcgataaaatttcctgaaatgatcactaaacttaaacacctttttaacaaaacctgtaaaaggtatcaaactgaaaagataagtttggatagctgaatatcttgtgaacattttaaagtttgtttggcgtctgtaggtgaaagtatgaaggagctgaaaattttgggagcggaagaagattttaaggagttgaagg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU139843 True 1614 lncRNA 0.41 3 8859061 8875429

Neighbor

gene id symbol gene type direction distance location
LOC120567368 NA coding downstream 110184 8741453 ~ 8748877 (-)
LOC120566969 NA coding downstream 774737 8083282 ~ 8084324 (-)
slitrk4 slitrk4 coding downstream 863117 7988331 ~ 7995944 (-)
trnam-cau_17 NA coding downstream 1717653 7141336 ~ 7141408 (-)
trnam-cau_16 NA coding downstream 1719319 7139670 ~ 7139742 (-)
atoh8 atoh8 coding upstream 403722 9279151 ~ 9306056 (-)
rnf103 rnf103,LOC102791352 coding upstream 432342 9307771 ~ 9353105 (-)
igbp1 NA coding upstream 622684 9498113 ~ 9512944 (-)
LOC120566640 NA coding upstream 713344 9588773 ~ 9590731 (-)
slitrk2 slitrk2 coding upstream 1931870 10807299 ~ 10811732 (-)
G104036 NA non-coding downstream 15819 8842756 ~ 8843242 (-)
G104035 NA non-coding downstream 16946 8841331 ~ 8842115 (-)
G104032 NA non-coding downstream 18226 8840237 ~ 8840835 (-)
LOC120567376 NA non-coding downstream 63025 8795621 ~ 8796036 (-)
G104028 NA non-coding downstream 70439 8788354 ~ 8788622 (-)
G104059 NA non-coding upstream 10972 8886401 ~ 8886992 (-)
G104072 NA non-coding upstream 62710 8938139 ~ 8938376 (-)
G104086 NA non-coding upstream 80915 8956344 ~ 8963582 (-)
G104093 NA non-coding upstream 142507 9017936 ~ 9045162 (-)
G104116 NA non-coding upstream 265394 9140823 ~ 9141191 (-)
G103806 NA other downstream 1572089 7286459 ~ 7286972 (-)
LOC120566343 NA other downstream 2099485 6756792 ~ 6759576 (-)
G103434 LOC102212171 other downstream 4272977 4575782 ~ 4586084 (-)
myot LOC103355626,LOC104955473 other downstream 4283385 4554225 ~ 4575676 (-)
fmr1 fmr1,LOC102779310 other downstream 4401234 4426517 ~ 4457827 (-)
LOC120567361 NA other upstream 291861 9167290 ~ 9177633 (-)
abhd18 abhd18 other upstream 480283 9355712 ~ 9457863 (-)
LOC120566283 magt1,LOC102791632 other upstream 688570 9563999 ~ 9569926 (-)
G104258 NA other upstream 762567 9637996 ~ 9638596 (-)
LOC120566907 magt1,LOC102791632 other upstream 767111 9642540 ~ 9667951 (-)

Expression


Co-expression Network