LOC120567361


Basic Information

Item Value
gene id LOC120567361
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 9167290 ~ 9177633 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU139925
atggggatatgccgatacgcgtttacatgaccaaaatgtcgggttagaaaaggggtaacccaggtagcatattcgggtttttaaaaaccggaatatgagcatattcgggtttttgccggtgtttacatggccgtgcgcgaccgggttattgctaatattccggttttgaacgggttattggctgcatgtaaacgtagtcagtgacgGGCACATCATACAAAAAGGGCATGTTTATTTTGCTGGGGAAAACTGAAGAAGAGTTGGAGGT
>XM_039814323.1
gggttattggctgcatgtaaacgtagtcagtgacgGGCACATCATACAAAAAGGGCATGTTTATTTTGCTGGGGAAAACTGAAGAAGAGTTGGAGGTTGGCAAGATAGAGCTGGTCATTGTGCACCACGGCTCTGTGTCCTTTGTCTCagaaaaatattgttttgttaaGTTGAGGGACATTGGGGTCTacagtgttttggggacacccCAAGAGCAGTTTGTTTGCGTGAGGCATGATGATCTACTGGATTATTATCCATTGCCATCCTACACAATGTGTGATATTACAATGATCTGTCTCCATCACTCCTTTGCAGAGACATGTCTGCAGGACAGGAGGAGCTCAGGAGGGCTGTCTTGGCAGTACTTCCGGACCTACCTACTTCCGAACTACCTTGATGGCAGGCCTGGAGGAACTTGGTGTAGAGAACAAGGAGGACATGAGCCTTCTAAGTGAAGAGAATCTTCTGCCCTTTCTCCGTGTGGTCCAGTCTAGAAAGCTCCTCCGTGCCTTTTCATCTCAAGGTTACTTCTCAGCCCTGTCTCCTCCTGGCTCTCCACAACTCTCCTCAACCCTGTCCCCCGCGGGAAGTCCACAACTCTCCTCACCTGAGACACCCCGAACGTCCAACCCAATAGCTCTTCCCTCACCACGCACACCATGGCCTGTACATTTTAAGGTTAACTGGGAAAAGATGACGTCAGAGATCCAGTCAGCCATCGCAAATTCTACTAGACCAAATCCAGCCGCCAGAAGAGCGATGGTCAGAGAGCTTGTCGATCAAATGAGGGTGCACAATGCGAATCCAAATAGAGGGATCTGTTTGAAAGTTGTAAACGATATAATACAGAAGTACCCCACATGTTTTGGGGATGTGGATGATGGTGAAAATACAGCTGGAGCATCGCTCGTCCAGCAAGTAAAAACCAGAATTGAGCACGTCAACCGAAACAACACATTGGCACGGTTAAGAAAGAATAAGCACAGCAATCCCCAGGCGAGGACAAATGGAAGAGGTCCTGTTGATCAGTATGGATGTGTCCGATGGGCACCTCAAGAACTCCCCTCAGGGGAGACTGAAGAAACCCTACAAGAGATGAAGACTCAGATGCAGCAGCTATATGCCCAGGAAGGAATGTCAGGCGTGGAGAGAGGAGCGCTTCAGAGATGGCTTCAGAGAACCTATATTCTCCAGCGTTGTGATCTCAATGCTGACCCTCCACACAGCGTCTCAAAAATGAAGGACGACTGGCCCTTTCTCTTCTCCTTGAAGGGCCTGTTCTTGCATTTCAGTGAGCTGACCGGAATTCCTATCCAGGAGAAGCTGCCAGCCACTATAGACAACAGGAGTCAGAACATCATGGAGTACTTCAAACAGCAGAAGACACCAGGGGTGGGGAAGGTTCTGGAAGCCTACAATGAAGAGAGTGGCAACAAAGCTGTCTGCACCATCATGTGCCTGCTTGCTCACTTTAAAGAGGAGGATGGTATCTTCCTTACGGCTGATGAGAGATACTGCGCGGCGCAGACACATGGATTATGTCCATGGAAGGAGCATGTGTGATGGGGCCCCACAGCAACCTCCTGCATGGATTGGCAGCACTCTTCGCTGCCTACTACGTCTTCAACTTGCAATATCCGGCAGAAGCCGCAAGCACACTTGAGTTCATCCAGAGGTGTGTTTTAAACATAGCACCGTCATGAAAATGTTCATAGCAATGACTTGATATATGAAAGGATCTTAATCAATGTTTATGACTTTTCtgtaatttacatttttgttagttAGGGATGTCAGTAAGTTGGCCCGGCCCACttaatacaaaaacatattaCTTCGCATTTTGAGGGATCAGATTTTACACATTACTTTAGGTATAAGAAAAaactcacacatacagacactcaCTCAATCTCTCACAGTATTCCGGCACCGTGCCGGATCTCCGGCGTGACACGGTTGTGAAGAAATTTTCATCAGGATAGAAATTCGGGAAAGGTTTATCATTTTTGAGTTCCCCAAAACTCCAACCAGTGCACTCACATCGCAGACCCTTGCATCGATATCGTGCcaagccacagacacacacacgctcatatAGCCTACACCGACTCTGtctcgcacgcacgcacgcacgcacgcacacacacactaattcaTTCATTGATAAAGATCCCTTAATGTTTCATGTCATGGTAATGACCATCTCAACGTGTCTTAAATGTTACCTGATAAGTGtgttttcccccccccctgttttcaggggggggaaaaaatcccaatatataaataaatcccCAGACGGGCAGCAAGGCAGAGAAAAAACGAGGGCTGAATGCACCAGTTTGCACACTTTTGAGAAAACTGCTGGATTTTGAATTGGTGGGTAGGGGACATTAGTGGACAGGGGACATTAATGGACAGGGGACATTAGAGGACATTTGTGGATGGGGGACATTAGAGGACATTTGTGGACGGGGGACAGAGGACATTAGTGGACAGGGGACATTAGAGGACATTTGTGGACGGGGGACATTAGaggacatttgaggacatttgTGGACGGGGGACATTAGAGGACATTTGTGGACGGGGGACATTAGTGGAAAGGGGGCATTAGTGGACAGGTGACATTAGAGGACATTAGTGGAAAGGGGACATTAGTGGACAGGGTACATTAGAGGACATTAGTGGACAGGGGACATTAGAGGACATTAGTGGGCAGGGGACATTAGAGGACATTTGTGGGCAGGGGACATTAGGTTTAAC
>XR_005640547.1
gggttattggctgcatgtaaacgtagtcagtgacgGGCACATCATACAAAAAGGGCATGTTTATTTTGCTGGGGAAAACTGAAGAAGAGTTGGAGGTTGGCAAGATAGAGCTGGTCATTGTGCACCACGGCTCTGTGTCCTTTGTCTCagaaaaatattgttttgttaaGTTGAGGGACATTGGGGTCTacagtgttttggggacacccCAAGAGCAGTTTGTTTGCGTGAGGCATGATGATCTACTGGATTATTATCCATTGCCATCCTACACAATGTGTGATATTACAATGATCTGTCTCCATCACTCCTTTGCAGAGACATGTCTGCAGGACAGGAGGAGCTCAGGAGGGCTGTCTTGGCAGTACTTCCGGACCTACCTACTTCCGAACTACCTTGATGGCAGGCCTGGAGGAACTTGGTGTAGAGAACAAGGAGGACATGAGCCTTCTAAGTGAAGAGAATCTTCTGCCCTTTCTCCGTGTGGTCCAGTCTAGAAAGCTCCTCCGTGCCTTTTCATCTCAAGGTTACTTCTCAGCCCTGTCTCCTCCTGGCTCTCCACAACTCTCCTCAACCCTGTCCCCCGCGGGAAGTCCACAACTCTCCTCACCTGAGACACCCCGAACGTCCAACCCAATAGCTCTTCCCTCACCACGCACACCATGGCCTGTACATTTTAAGGTTAACTGGGAAAAGATGACGTCAGAGATCCAGTCAGCCATCGCAAATTCTACTAGACCAAATCCAGCCGCCAGAAGAGCGATGGTCAGAGAGCTTGTCGATCAAATGAGGGTGCACAATGCGAATCCAAATAGAGGGATCTGTTTGAAAGTTGTAAACGATATAATACAGAAGTACCCCACATGTTTTGGGGATGTGGATGATGGTGAAAATACAGCTGGAGCATCGCTCGTCCAGCAAGTAAAAACCAGAATTGAGCACGTCAACCGAAACAACACATTGGCACGGTTAAGAAAGAATAAGCACAGCAATCCCCAGGCGAGGACAAATGGAAGAGGTCCTGTTGATCAGTATGGATGTGTCCGATGGGCACCTCAAGAACTCCCCTCAGGGGAGACTGAAGAAACCCTACAAGAGATGAAGACTCAGATGCAGCAGCTATATGCCCAGGAAGGAATGTCAGGCGTGGAGAGAGGAGCGCTTCAGAGATGGCTTCAGAGAACCTATATTCTCCAGCGTTGTGATCTCAATGCTGACCCTCCACACAGCGTCTCAAAAATGAAGGACGACTGGCCCTTTCTCTTCTCCTTGAAGGGCCTGTTCTTGCATTTCAGTGAGCTGACCGGAATTCCTATCCAGGAGAAGCTGCCAGCCACTATAGACAACAGGAGTCAGAACATCATGGAGTACTTCAAACAGCAGAAGACACCAGGGGTGGGGAAGGTTCTGGAAGCCTACAATGAAGAGAGTGGCAACAAAGCTGTCTGCACCATCATGTGCCTGCTTGCTCACTTTAAAGAGGAGGATGGTATCTTCCTTACGGCTGATGAGAGATACTGCGCGGCGCAGACACATGGATTATGTCCATGGAAGGAGCATGTGTGATGGGGCCCCACAGCAACCTCCTGCATGGATTGGCAGCACTCTTCGCTGCCTACTACGTCTTCAACTTGCAATATCCGGCAGAAGCCGCAAGCACACTTGAGTTCATCCAGAGgtggaggaggtgaaaagGCTACGCAGGGGAGGCCCAGTCCACAGAGGGATATTGAATCACATTGATTCTTCACATCCCAGAGACTTCCAGGgtttagagattcccagttcaggaTCGAGACTCTGAACGTAGATGGATTTCCCTTGATTCATTCTTCATGGTGGAAGGACAAacggaaaccaaactcatatgggccccaatgttgaacatctctgaactcttgtca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU139925 False 268 lncRNA 0.45 1 9177366 9177633
XM_039814323.1 True 2772 mRNA 0.48 5 9171427 9177462
XR_005640547.1 False 1904 transcript 0.49 6 9167290 9177462

Neighbor

gene id symbol gene type direction distance location
LOC120567368 NA coding downstream 418413 8741453 ~ 8748877 (-)
LOC120566969 NA coding downstream 1082966 8083282 ~ 8084324 (-)
slitrk4 slitrk4 coding downstream 1171346 7988331 ~ 7995944 (-)
trnam-cau_17 NA coding downstream 2025882 7141336 ~ 7141408 (-)
trnam-cau_16 NA coding downstream 2027548 7139670 ~ 7139742 (-)
atoh8 atoh8 coding upstream 101518 9279151 ~ 9306056 (-)
rnf103 rnf103,LOC102791352 coding upstream 130138 9307771 ~ 9353105 (-)
igbp1 NA coding upstream 320480 9498113 ~ 9512944 (-)
LOC120566640 NA coding upstream 411140 9588773 ~ 9590731 (-)
slitrk2 slitrk2 coding upstream 1629666 10807299 ~ 10811732 (-)
G104116 NA non-coding downstream 26099 9140823 ~ 9141191 (-)
G104093 NA non-coding downstream 122128 9017936 ~ 9045162 (-)
G104086 NA non-coding downstream 203708 8956344 ~ 8963582 (-)
G104072 NA non-coding downstream 228914 8938139 ~ 8938376 (-)
G104059 NA non-coding downstream 280298 8886401 ~ 8886992 (-)
LOC120567371 NA non-coding upstream 8277 9185910 ~ 9201784 (-)
G104213 NA non-coding upstream 105452 9283085 ~ 9284265 (-)
G104212 NA non-coding upstream 175694 9353327 ~ 9353733 (-)
G104214 NA non-coding upstream 176440 9354073 ~ 9354367 (-)
G104215 NA non-coding upstream 176760 9354393 ~ 9355311 (-)
G103806 NA other downstream 1880318 7286459 ~ 7286972 (-)
LOC120566343 NA other downstream 2407714 6756792 ~ 6759576 (-)
G103434 LOC102212171 other downstream 4581206 4575782 ~ 4586084 (-)
myot LOC103355626,LOC104955473 other downstream 4591614 4554225 ~ 4575676 (-)
fmr1 fmr1,LOC102779310 other downstream 4709463 4426517 ~ 4457827 (-)
abhd18 abhd18 other upstream 178079 9355712 ~ 9457863 (-)
LOC120566283 magt1,LOC102791632 other upstream 386366 9563999 ~ 9569926 (-)
G104258 NA other upstream 460363 9637996 ~ 9638596 (-)
LOC120566907 magt1,LOC102791632 other upstream 464907 9642540 ~ 9667951 (-)
G104610 immt,LOC102797104 other upstream 2787346 11964979 ~ 11992678 (-)

Expression


Co-expression Network