G105086


Basic Information

Item Value
gene id G105086
gene name NA
gene type unknown
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 15133530 ~ 15134736 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU141106
GTTTTGTCTGGGTTAATCCGGCTGGAACGTGCAGGCTCGCTGGTGTTGGGCTCAAACGGAGAGTATTAAACAGCCTCTCCCGCTGCTGCCGGCTCAGACGGATGTGTGGACGCTGCAGGGACAGAGACAGGAGCCATGGCCTCGTTCAAGAAATCCTTTGAGAGCCTGAAAGGCACGAGCCACTCGGCCGCGAAGGGAGTCACAGACACTGCAGTGCAGGCAGCTCAGGAAGCTGTGCAGCAGGTGGCAGACTCCTCCAAAGAAACAGCCAACACAGCTGCTCAAGAGGCTGGCAGACAGACTCAGGCAGCCATAGGGAAAGCTGCGGACAAGGCCACGGACACCATCAAGGAGTTTGGACAGAAATTGGAGACCAAATGATCCCTAAAAAATGAACAATTCTAGCTAAAGCACTGGAGCCAACTTGTCTCATCATCCATATTAGACAAGTAATAATGTTGGGATGGAAGTATGATGGCATCAGAAAAcctaaaaaaagatatatagggtatatatagcc

Function

GO:

id name namespace
GO:0005198 structural molecule activity molecular_function
GO:0005212 structural constituent of eye lens molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU141106 True 520 TUCP 0.51 3 15133530 15134736

Neighbor

gene id symbol gene type direction distance location
LOC120567479 NA coding downstream 1376 15127898 ~ 15132154 (-)
nek12 NA coding downstream 80280 15050136 ~ 15053250 (-)
drd1a drd1,LOC103470866,LOC103144507,LOC106953475 coding downstream 101262 15028908 ~ 15032268 (-)
nkx2.5 nkx2-5 coding downstream 232240 14898308 ~ 14901290 (-)
ppp2r2ba ppp2r2b,LOC107086445,LOC104946885,LOC100708080 coding downstream 250714 14834054 ~ 14882816 (-)
sncb sncb coding upstream 390 15135126 ~ 15149929 (-)
ctnna1 ctnna1 coding upstream 306683 15441419 ~ 15516760 (-)
LOC120566876 LOC104959829 coding upstream 486278 15621014 ~ 15638360 (-)
dctn4 dctn4 coding upstream 536899 15671635 ~ 15688818 (-)
tnip1 tnip1,LOC103376067 coding upstream 563601 15698337 ~ 15715960 (-)
G105049 NA non-coding downstream 104664 15028350 ~ 15028866 (-)
G105040 NA non-coding downstream 108121 15025016 ~ 15025409 (-)
LOC120567075 NA non-coding downstream 180475 14948393 ~ 14953055 (-)
G105001 NA non-coding downstream 242019 14890593 ~ 14891511 (-)
G104999 NA non-coding downstream 245323 14883859 ~ 14888207 (-)
LOC120567002 NA non-coding upstream 70397 15205133 ~ 15436933 (-)
G105096 NA non-coding upstream 139819 15274555 ~ 15274923 (-)
G105110 NA non-coding upstream 196189 15330925 ~ 15331139 (-)
G105113 NA non-coding upstream 228900 15363636 ~ 15363941 (-)
G105147 NA non-coding upstream 392330 15527066 ~ 15529259 (-)
rnf44 rnf44 other downstream 24932 15089404 ~ 15108598 (-)
LOC120567441 LOC100697283,LOC102197909,LOC102314576 other downstream 394037 14735192 ~ 14739493 (-)
uvssa uvssa,LOC104961899,LOC106533076 other downstream 560037 14537100 ~ 14573493 (-)
G104837 NA other downstream 877489 14150492 ~ 14256041 (-)
G104656 NA other downstream 2989786 12142700 ~ 12143744 (-)
tspan17 tspan17,LOC103361971 other upstream 463607 15598343 ~ 15619108 (-)
hnrnph1 hnrnph1,LOC102791917 other upstream 731324 15866060 ~ 15871949 (-)
unc5a unc5a,LOC102788949 other upstream 825461 15960197 ~ 16103794 (-)
gria3b LOC107394330,LOC106515969,LOC108242060,LOC101171999,LOC103357241,LOC104923180,LOC100695922,LOC102783061,LOC105925698,LOC107093457 other upstream 1389620 16524356 ~ 16674855 (-)
rab9b rab9b,LOC103391151,LOC102204615,LOC100697336,LOC108436189,LOC103026314,LOC105912179 other upstream 1822907 16957643 ~ 16963536 (-)

Expression


Co-expression Network