G105110


Basic Information

Item Value
gene id G105110
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 15330925 ~ 15331139 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU141134
accttaacgatgaaaagttattaaaagaaaaacttttcgtcagacagtgtgggcgtggcggccattttgagtgtttagcgatgaacaaagaagttgttgtaacttgagtgtacgttgtcgtatctgcccgaaatttctcacaattgacaagggtccgggcctgaggacacctacaggccaaaattgacttttggtcatagcgccccccgctggca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU141134 True 215 lncRNA 0.46 1 15330925 15331139

Neighbor

gene id symbol gene type direction distance location
sncb sncb coding downstream 180996 15135126 ~ 15149929 (-)
LOC120567479 NA coding downstream 198771 15127898 ~ 15132154 (-)
nek12 NA coding downstream 277675 15050136 ~ 15053250 (-)
drd1a drd1,LOC103470866,LOC103144507,LOC106953475 coding downstream 298657 15028908 ~ 15032268 (-)
nkx2.5 nkx2-5 coding downstream 429635 14898308 ~ 14901290 (-)
ctnna1 ctnna1 coding upstream 110280 15441419 ~ 15516760 (-)
LOC120566876 LOC104959829 coding upstream 289875 15621014 ~ 15638360 (-)
dctn4 dctn4 coding upstream 340496 15671635 ~ 15688818 (-)
tnip1 tnip1,LOC103376067 coding upstream 367198 15698337 ~ 15715960 (-)
anxa6 anxa6,LOC102795126 coding upstream 386102 15717241 ~ 15729319 (-)
G105096 NA non-coding downstream 56002 15274555 ~ 15274923 (-)
G105049 NA non-coding downstream 302059 15028350 ~ 15028866 (-)
G105040 NA non-coding downstream 305516 15025016 ~ 15025409 (-)
LOC120567075 NA non-coding downstream 377870 14948393 ~ 14953055 (-)
G105001 NA non-coding downstream 439414 14890593 ~ 14891511 (-)
G105113 NA non-coding upstream 32497 15363636 ~ 15363941 (-)
G105147 NA non-coding upstream 195927 15527066 ~ 15529259 (-)
G105149 NA non-coding upstream 238679 15569818 ~ 15570080 (-)
G105217 LOC103376071,LOC104959352 non-coding upstream 420315 15751454 ~ 15755017 (-)
G105230 NA non-coding upstream 497152 15828291 ~ 15828491 (-)
G105086 NA other downstream 196189 15133530 ~ 15134736 (-)
rnf44 rnf44 other downstream 222327 15089404 ~ 15108598 (-)
LOC120567441 LOC100697283,LOC102197909,LOC102314576 other downstream 591432 14735192 ~ 14739493 (-)
uvssa uvssa,LOC104961899,LOC106533076 other downstream 757432 14537100 ~ 14573493 (-)
G104837 NA other downstream 1074884 14150492 ~ 14256041 (-)
tspan17 tspan17,LOC103361971 other upstream 267204 15598343 ~ 15619108 (-)
hnrnph1 hnrnph1,LOC102791917 other upstream 534921 15866060 ~ 15871949 (-)
unc5a unc5a,LOC102788949 other upstream 629058 15960197 ~ 16103794 (-)
gria3b LOC107394330,LOC106515969,LOC108242060,LOC101171999,LOC103357241,LOC104923180,LOC100695922,LOC102783061,LOC105925698,LOC107093457 other upstream 1193217 16524356 ~ 16674855 (-)
rab9b rab9b,LOC103391151,LOC102204615,LOC100697336,LOC108436189,LOC103026314,LOC105912179 other upstream 1626504 16957643 ~ 16963536 (-)

Expression


Co-expression Network